Microexon ID Sm_GL377623:631003-631008:+
Species Selaginella moellendorffii
Coordinates GL377623:631003..631008
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Sm_GL377623:631003-631008:+ does not have available information here.
Transcript ID EFJ15372
Protein ID EFJ15372
Gene ID SELMODRAFT_450037
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >EFJ15372
MADVGSPRSQDSPHSDDAGGHGGERDNSNVREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEAS
DKCQREKRKTINGDDLLWAMSTLGFEEYLEPLKIYLQKYRETEGDKGSGVKGEGKKDQSMAVPSPVQSSMYTSMSYLPQQ
AL*
CDS seq >EFJ15372
ATGGCGGACGTGGGAAGTCCCAGGAGCCAGGATAGCCCACACTCGGACGACGCTGGTGGCCATGGTGGCGAACGCGACAA
CTCCAACGTAAGGGAGCAAGACAGGTTCCTTCCCATCGCCAACATCAGTCGGATAATGAAGAAGGCGCTGCCGGCGAATG
CAAAGATCGCCAAGGATGCCAAGGAGACGGTGCAAGAATGCGTCTCGGAGTTCATCAGCTTCATCACTAGCGAAGCCAGT
GACAAGTGCCAAAGAGAGAAGAGGAAGACGATCAATGGCGATGACTTGCTATGGGCAATGAGCACGCTGGGCTTCGAGGA
GTACTTGGAACCTTTGAAGATCTACTTGCAAAAGTACAGAGAGACGGAGGGAGACAAAGGATCGGGAGTCAAGGGAGAAG
GCAAGAAGGACCAGAGCATGGCTGTTCCATCTCCTGTCCAGTCGAGTATGTACACCAGCATGAGTTACTTGCCACAGCAG
GCACTCTAG
Microexon DNA seq ACGGAG
Microexon Amino Acid seq TE
Microexon-tag DNA Seq TTCGAGGAGTACTTGGAACCTTTGAAGATCTACTTGCAAAAGTACAGAGAGACGGAGGGAGACAAAGGATCGGGAGTCAAGGGAGAAGGCAAGAAGGACCAGAGCATG
Microexon-tag Amino Acid seq FEEYLEPLKIYLQKYRETEGDKGSGVKGEGKKDQSM
Transcript ID Sm.22213.5
Gene ID Sm.22213
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Sm.22213.5
MADVGSPRSQDSPHSDDAGGHGGERDNSNVREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSDDK
CQREKRKTINGDDLLWAMSTLGFEEYLEPLKIYLQKYRETEGDKGSGVKGEGKKDQSMAVPSPVQSSMYTSMSYLPQQAL
*
CDS seq >Sm.22213.5
ATGGCGGACGTGGGAAGTCCCAGGAGCCAGGATAGCCCACACTCGGACGACGCTGGTGGCCATGGTGGCGAACGCGACAA
CTCCAACGTAAGGGAGCAAGACAGGTTCCTTCCCATCGCCAACATCAGTCGGATAATGAAGAAGGCGCTGCCGGCGAATG
CAAAGATCGCCAAGGATGCCAAGGAGACGGTGCAAGAATGCGTCTCGGAGTTCATCAGCTTCATCACTAGCGATGACAAG
TGCCAAAGAGAGAAGAGGAAGACGATCAATGGCGATGACTTGCTATGGGCAATGAGCACGCTGGGCTTCGAGGAGTACTT
GGAACCTTTGAAGATCTACTTGCAAAAGTACAGAGAGACGGAGGGAGACAAAGGATCGGGAGTCAAGGGAGAAGGCAAGA
AGGACCAGAGCATGGCTGTTCCATCTCCTGTCCAGTCGAGTATGTACACCAGCATGAGTTACTTGCCACAGCAGGCACTC
TAG