
Microexon ID | Sm_GL377588:333505-333510:- |
Species | Selaginella moellendorffii | Coordinates | GL377588:333505..333510 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377588:333505-333510:- does not have available information here.
Transcript ID | EFJ24974 |
Protein ID | EFJ24974 |
Gene ID | SELMODRAFT_450048 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >EFJ24974 MADVGSPRSQDSPHSDDAGGHGGERDNSNVREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEAS DKCQREKRKTINGDDLLWAMSTLGFEEYLEPLKIYLQKYRETEGDKGSGVKGEGKKDQSMAVPSPVQSSMYTSMSYLPQQ AL* |
CDS seq | >EFJ24974 ATGGCGGACGTGGGAAGTCCCAGGAGCCAGGATAGCCCACACTCGGACGACGCTGGTGGCCATGGTGGCGAACGCGACAA CTCCAACGTAAGGGAGCAAGACAGGTTCCTTCCCATCGCCAACATCAGCCGGATAATGAAGAAGGCGCTGCCGGCGAATG CAAAGATCGCCAAGGATGCCAAGGAGACGGTGCAAGAATGCGTCTCAGAGTTCATCAGCTTCATCACTAGCGAAGCCAGT GACAAGTGCCAAAGAGAGAAGAGGAAGACGATCAATGGCGATGACTTGCTATGGGCAATGAGCACGCTGGGCTTCGAGGA GTACTTGGAACCTTTGAAGATCTACTTGCAAAAGTACAGAGAGACGGAGGGAGACAAAGGATCGGGAGTCAAGGGAGAAG GCAAGAAGGACCAGAGCATGGCTGTTCCATCTCCTGTCCAGTCGAGTATGTACACCAGCATGAGTTACTTGCCACAGCAG GCACTCTAG |
Microexon DNA seq | ACGGAG |
Microexon Amino Acid seq | TE |
Microexon-tag DNA Seq | TTCGAGGAGTACTTGGAACCTTTGAAGATCTACTTGCAAAAGTACAGAGAGACGGAGGGAGACAAAGGATCGGGAGTCAAGGGAGAAGGCAAGAAGGACCAGAGCATG |
Microexon-tag Amino Acid seq | FEEYLEPLKIYLQKYRETEGDKGSGVKGEGKKDQSM |
Transcript ID | EFJ24974 |
Gene ID | Sm.12864 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >EFJ24974 MADVGSPRSQDSPHSDDAGGHGGERDNSNVREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEAS DKCQREKRKTINGDDLLWAMSTLGFEEYLEPLKIYLQKYRETEGDKGSGVKGEGKKDQSMAVPSPVQSSMYTSMSYLPQQ AL* |
CDS seq | >EFJ24974 ATGGCGGACGTGGGAAGTCCCAGGAGCCAGGATAGCCCACACTCGGACGACGCTGGTGGCCATGGTGGCGAACGCGACAA CTCCAACGTAAGGGAGCAAGACAGGTTCCTTCCCATCGCCAACATCAGCCGGATAATGAAGAAGGCGCTGCCGGCGAATG CAAAGATCGCCAAGGATGCCAAGGAGACGGTGCAAGAATGCGTCTCAGAGTTCATCAGCTTCATCACTAGCGAAGCCAGT GACAAGTGCCAAAGAGAGAAGAGGAAGACGATCAATGGCGATGACTTGCTATGGGCAATGAGCACGCTGGGCTTCGAGGA GTACTTGGAACCTTTGAAGATCTACTTGCAAAAGTACAGAGAGACGGAGGGAGACAAAGGATCGGGAGTCAAGGGAGAAG GCAAGAAGGACCAGAGCATGGCTGTTCCATCTCCTGTCCAGTCGAGTATGTACACCAGCATGAGTTACTTGCCACAGCAG GCACTCTAG |