Microexon ID Sb_9:52255797-52255802:-
Species Sorghum   Bicolor
Coordinates 9:52255797..52255802
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTTGAGGACTACATTGAACCACTCAAGGTGTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAGTTAACTGCAAAAACCGGTGATGGCTCAATTAAAAAGGAT
Microexon-tag Amino Acid Seq FEDYIEPLKVYLQKYREMEGDSKLTAKTGDGSIKKD
Microexon-tag spanning region52255102-52256544
Microexon-tag prediction score0.953
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG22176x
Reference Transcript ID KXG22176
Gene ID SORBI_3009G166200
Gene Name NF-YB2
Transcript ID KXG22176
Protein ID
Gene ID SORBI_3009G166200
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >KXG22176
MADAPASPGGGGGSHESGSPRGGGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEA
SDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKTGDGSIKKDALGHVGGSSSAAQGMGQQG
AYNQGMGYMQPQYHNGDISN*
CDS seq >KXG22176
ATGGCGGACGCTCCGGCGAGCCCTGGGGGCGGCGGCGGGAGCCACGAGAGCGGGAGCCCCAGGGGCGGCGGAGGTGGAGG
CGGTGGCAGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGTCGCATCATGAAGAAGGCCATCCCGGCTA
ACGGGAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCAGAGTTCATCTCCTTCATCACTAGCGAAGCG
AGTGACAAGTGCCAGAGGGAGAAGCGGAAGACCATCAACGGCGACGACCTGCTGTGGGCCATGGCCACATTGGGGTTTGA
GGACTACATTGAACCACTCAAGGTGTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAGTTAACTGCAAAAACCG
GTGATGGCTCAATTAAAAAGGATGCCCTTGGTCATGTGGGAGGAAGTAGCTCAGCTGCACAAGGGATGGGCCAACAAGGA
GCATACAACCAAGGAATGGGTTATATGCAACCTCAGTACCATAATGGGGATATCTCAAACTAA
Sb_9:52255797-52255802:- does not have available information here.