
Microexon ID | Sb_9:52255797-52255802:- |
Species | Sorghum Bicolor | Coordinates | 9:52255797..52255802 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTTGAGGACTACATTGAACCACTCAAGGTGTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAGTTAACTGCAAAAACCGGTGATGGCTCAATTAAAAAGGAT |
Microexon-tag Amino Acid Seq | FEDYIEPLKVYLQKYREMEGDSKLTAKTGDGSIKKD |
Microexon-tag spanning region | 52255102-52256544 |
Microexon-tag prediction score | 0.953 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG22176x |
Reference Transcript ID | KXG22176 |
Gene ID | SORBI_3009G166200 |
Gene Name | NF-YB2 |
Transcript ID | KXG22176 |
Protein ID | |
Gene ID | SORBI_3009G166200 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KXG22176 MADAPASPGGGGGSHESGSPRGGGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEA SDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKTGDGSIKKDALGHVGGSSSAAQGMGQQG AYNQGMGYMQPQYHNGDISN* |
CDS seq | >KXG22176 ATGGCGGACGCTCCGGCGAGCCCTGGGGGCGGCGGCGGGAGCCACGAGAGCGGGAGCCCCAGGGGCGGCGGAGGTGGAGG CGGTGGCAGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGTCGCATCATGAAGAAGGCCATCCCGGCTA ACGGGAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCAGAGTTCATCTCCTTCATCACTAGCGAAGCG AGTGACAAGTGCCAGAGGGAGAAGCGGAAGACCATCAACGGCGACGACCTGCTGTGGGCCATGGCCACATTGGGGTTTGA GGACTACATTGAACCACTCAAGGTGTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAGTTAACTGCAAAAACCG GTGATGGCTCAATTAAAAAGGATGCCCTTGGTCATGTGGGAGGAAGTAGCTCAGCTGCACAAGGGATGGGCCAACAAGGA GCATACAACCAAGGAATGGGTTATATGCAACCTCAGTACCATAATGGGGATATCTCAAACTAA |
Sb_9:52255797-52255802:- does not have available information here.