
Microexon ID | Pt_8:2551730-2551735:- |
Species | Populus Trichocarpa | Coordinates | 8:2551730..2551735 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGAG |
Microexon Amino Acid seq | LE |
Microexon-tag DNA Seq | TTTGAGGATTATATTGAGCCACTTAAGGTGTACCTGGCTAGGTACCGGGAGTTGGAGGGTGATGCAAAGGGGTCTGCTAGAGGTGGAGATGGATCTTCTAAACGGGAT |
Microexon-tag Amino Acid Seq | FEDYIEPLKVYLARYRELEGDAKGSARGGDGSSKRD |
Microexon-tag spanning region | 2551529-2551916 |
Microexon-tag prediction score | 0.968 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Potri.008G044800.4.v4.1x |
Reference Transcript ID | Potri.008G044800.4.v4.1 |
Gene ID | Potri.008G044800.v4.1 |
Gene Name | NA |
Transcript ID | Potri.008G044800.4.v4.1 |
Protein ID | |
Gene ID | Potri.008G044800.v4.1 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Potri.008G044800.4.v4.1 MADNPTSPAAGSHESGGEQSPRSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFVTSEASDKCQK EKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRELEGDAKGSARGGDGSSKRDAVGGLPGQNAQFAFQGSMNYTSPQV QGQHMILPSMPGNE* |
CDS seq | >Potri.008G044800.4.v4.1 ATGGCCGATAATCCGACCAGTCCGGCGGCGGGGAGCCACGAGAGTGGTGGTGAGCAGAGCCCGCGGTCAGGGGTGAGAGA GCAGGATAGATACCTGCCTATTGCTAATATAAGTAGGATCATGAAGAAGGCGTTGCCGGCTAATGGAAAAATTGCTAAGG ATGCTAAGGATACTGTTCAGGAATGTGTTTCTGAGTTCATTAGCTTTGTTACCAGCGAGGCGAGTGATAAGTGTCAGAAG GAGAAGAGGAAGACGATCAATGGGGATGATTTGTTGTGGGCAATGGCAACGTTAGGATTTGAGGATTATATTGAGCCACT TAAGGTGTACCTGGCTAGGTACCGGGAGTTGGAGGGTGATGCAAAGGGGTCTGCTAGAGGTGGAGATGGATCTTCTAAAC GGGATGCAGTTGGAGGTCTGCCTGGTCAAAATGCACAGTTTGCTTTTCAAGGATCGATGAACTATACGAGTCCACAAGTG CAGGGACAGCATATGATCCTTCCTTCCATGCCAGGCAACGAGTAG |
Pt_8:2551730-2551735:- does not have available information here.