
Microexon ID | Ps_NC_039366.1:29403531-29403536:- |
Species | Papaver somniferum | Coordinates | NC_039366.1:29403531..29403536 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTTGAGGATTATATAGATCCACTTAAGGTGTACCTCAATAGGTACAGAGAGATGGAGGGTGATACAAAAGGAACTGCTAAGGGTTCTGATGGATCTGGTAAAGCTCAA |
Microexon-tag Amino Acid Seq | FEDYIDPLKVYLNRYREMEGDTKGTAKGSDGSGKAQ |
Microexon-tag spanning region | 29403394-29403716 |
Microexon-tag prediction score | 0.937 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026556950.1x |
Reference Transcript ID | XM_026556950.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026556950.1 |
Protein ID | XP_026412735.1 |
Gene ID | LOC113308484 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026412735.1 MAEGPASPGGGSHESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQRE KRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREMEGDTKGTAKGSDGSGKAQPGQNPQIAPQGSFSQGGYMNS* |
CDS seq | >XM_026556950.1 ATGGCAGAAGGTCCAGCAAGTCCAGGCGGTGGAAGTCATGAAAGTGGAGAACAAAGTCCACGTTCTAATGTTCGTGAACA AGATAGATACTTACCAATTGCTAATATTAGCCGGATCATGAAGAAAGCTTTACCTGCTAATGGAAAGATTGCTAAAGATG CCAAAGAAACTGTTCAAGAATGTGTTTCTGAGTTTATCAGTTTCATCACTAGCGAGGCAAGTGATAAATGTCAGAGAGAA AAGCGAAAGACTATTAATGGAGATGATCTTTTGTGGGCAATGGCTACTTTAGGATTTGAGGATTATATAGATCCACTTAA GGTGTACCTCAATAGGTACAGAGAGATGGAGGGTGATACAAAAGGAACTGCTAAGGGTTCTGATGGATCTGGTAAAGCTC AACCAGGTCAAAACCCTCAGATTGCTCCCCAGGGGTCATTTTCACAGGGAGGCTATATGAACTCTTAA |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTTGAGGATTATATAGATCCACTTAAGGTGTACCTCAATAGGTACAGAGAGATGGAGGGTGATACAAAAGGAACTGCTAAGGGTTCTGATGGATCTGGTAAAGCTCAA |
Microexon-tag Amino Acid seq | FEDYIDPLKVYLNRYREMEGDTKGTAKGSDGSGKAQ |
Transcript ID | XM_026556950.1 |
Gene ID | Ps.54201 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026556950.1 MAEGPASPGGGSHESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQRE KRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREMEGDTKGTAKGSDGSGKAQPGQNPQIAPQGSFSQGGYMNS* |
CDS seq | >XM_026556950.1 ATGGCAGAAGGTCCAGCAAGTCCAGGCGGTGGAAGTCATGAAAGTGGAGAACAAAGTCCACGTTCTAATGTTCGTGAACA AGATAGATACTTACCAATTGCTAATATTAGCCGGATCATGAAGAAAGCTTTACCTGCTAATGGAAAGATTGCTAAAGATG CCAAAGAAACTGTTCAAGAATGTGTTTCTGAGTTTATCAGTTTCATCACTAGCGAGGCAAGTGATAAATGTCAGAGAGAA AAGCGAAAGACTATTAATGGAGATGATCTTTTGTGGGCAATGGCTACTTTAGGATTTGAGGATTATATAGATCCACTTAA GGTGTACCTCAATAGGTACAGAGAGATGGAGGGTGATACAAAAGGAACTGCTAAGGGTTCTGATGGATCTGGTAAAGCTC AACCAGGTCAAAACCCTCAGATTGCTCCCCAGGGGTCATTTTCACAGGGAGGCTATATGAACTCTTAA |