
Microexon ID | Pp_3:9633512-9633517:+ |
Species | Physcomitrium patens | Coordinates | 3:9633512..9633517 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Pp_3:9633512-9633517:+ does not have available information here.
Transcript ID | Pp3c3_13480V3.1 |
Protein ID | Pp3c3_13480V3.1 |
Gene ID | Pp3c3_13480 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Pp3c3_13480V3.1 MAEAGSPGSQDSPHSDEYGGNHGGGDRDNSSVREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSD LLSFMWSHVYDAISPFEWHLVLLPPFLGRFTELEGDTMVRKHAMNRASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPL KVYLHKYREIEGALTNKAGESSSGKKEGSNIVSPGVQMVQQGGYNPYMQAQMMTSGNYQVQHY* |
CDS seq | >Pp3c3_13480V3.1 ATGGCGGAGGCTGGAAGTCCTGGTAGTCAAGATAGTCCGCACTCGGATGAATACGGGGGTAACCATGGGGGCGGTGATAG GGACAACTCTAGTGTTCGTGAGCAGGATCGTTTTCTTCCAATTGCCAACATTAGCCGCATCATGAAGAAGGCGTTGCCTG CTAATGCTAAGATTGCCAAAGATGCGAAGGAGACTGTTCAGGAGTGTGTTTCAGAATTCATCAGTTTCATCACTAGCGAT TTGCTATCATTCATGTGGAGCCATGTTTATGATGCGATTTCTCCTTTTGAATGGCATTTAGTTCTACTTCCTCCTTTCTT AGGACGTTTTACAGAGTTGGAAGGCGATACAATGGTACGCAAGCATGCAATGAACAGAGCTAGCGACAAATGTCAGCGCG AAAAGAGAAAGACAATAAATGGAGACGATTTACTGTGGGCTATGAGCACATTAGGGTTCGAAGACTACGTCGAACCGCTA AAAGTTTATCTTCATAAGTATAGAGAGATTGAGGGTGCTTTGACAAACAAGGCTGGAGAATCATCCTCTGGCAAGAAGGA GGGAAGTAACATTGTGTCTCCTGGTGTGCAAATGGTACAGCAAGGAGGTTACAACCCCTACATGCAAGCGCAGATGATGA CTTCTGGCAATTACCAGGTACAGCATTATTAG |
Microexon DNA seq | ATTGAG |
Microexon Amino Acid seq | IE |
Microexon-tag DNA Seq | TTCGAAGACTACGTCGAACCGCTAAAAGTTTATCTTCATAAGTATAGAGAGATTGAGGGTGCTTTGACAAACAAGGCTGGAGAATCATCCTCTGGCAAGAAGGAGGGA |
Microexon-tag Amino Acid seq | FEDYVEPLKVYLHKYREIEGALTNKAGESSSGKKEG |
Transcript ID | Pp.18171.1 |
Gene ID | Pp.18171 |
Gene Name | NA |
Pfam domain motif | IL12 |
Motif E-value | 0.15 |
Motif start | 57 |
Motif end | 132 |
Protein seq | >Pp.18171.1 MAEAGSPGSQDSPHSDEYGGNHGGGDRDNSSVREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSE ASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYLHKYREIEGALTNKAGESSSGKKEGSNIVSPGVQMVQQGGYNP YMQAQMMTSGNYQVQHY* |
CDS seq | >Pp.18171.1 ATGGCGGAGGCTGGAAGTCCTGGTAGTCAAGATAGTCCGCACTCGGATGAATACGGGGGTAACCATGGGGGCGGTGATAG GGACAACTCTAGTGTTCGTGAGCAGGATCGTTTTCTTCCAATTGCCAACATTAGCCGCATCATGAAGAAGGCGTTGCCTG CTAATGCTAAGATTGCCAAAGATGCGAAGGAGACTGTTCAGGAGTGTGTTTCAGAATTCATCAGTTTCATCACTAGCGAA GCTAGCGACAAATGTCAGCGCGAAAAGAGAAAGACAATAAATGGAGACGATTTACTGTGGGCTATGAGCACATTAGGGTT CGAAGACTACGTCGAACCGCTAAAAGTTTATCTTCATAAGTATAGAGAGATTGAGGGTGCTTTGACAAACAAGGCTGGAG AATCATCCTCTGGCAAGAAGGAGGGAAGTAACATTGTGTCTCCTGGTGTGCAAATGGTACAGCAAGGAGGTTACAACCCC TACATGCAAGCGCAGATGATGACTTCTGGCAATTACCAGGTACAGCATTATTAG |