
Microexon ID | Pp_3:10167977-10167982:- |
Species | Physcomitrium patens | Coordinates | 3:10167977..10167982 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Pp_3:10167977-10167982:- does not have available information here.
Transcript ID | Pp3c3_14260V3.1 |
Protein ID | Pp3c3_14260V3.1 |
Gene ID | Pp3c3_14260 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Pp3c3_14260V3.1 MGKAHSVVPLPNQPPSLPPVARFASVLPLPPSLAPISPSSLSSCSSYIRCRRCCPLLLPLRPPLPSATPDPLSLPSLPPS LLHCLLGILTLLLHRRLALLGRLLSPTHGIRLGLPFRNISSMAEAGSPGSQDSPHSDDYGGNHGSGERDNSSVREQDRFL PIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYLH KYRETEGALTNKAGESSSGKKEGSGMVSPGVQQGGYNPYMQAQMMNPGNYQVQHY* |
CDS seq | >Pp3c3_14260V3.1 ATGGGGAAAGCGCACAGCGTCGTCCCTCTGCCAAACCAGCCTCCCTCTCTCCCTCCTGTTGCCCGCTTTGCCTCCGTGCT ACCCTTGCCTCCCTCCCTCGCACCGATCTCACCCTCCTCCCTCTCTTCCTGCAGCTCATACATACGCTGCAGACGTTGTT GTCCCCTTCTCCTTCCCCTTCGACCTCCCCTTCCCTCCGCCACACCGGACCCCCTCTCCCTTCCCTCCCTCCCTCCCTCC CTTCTTCATTGCCTCCTGGGAATACTTACCCTTTTACTTCATCGGCGTCTCGCTTTGCTGGGCAGGCTCCTCTCTCCAAC CCACGGCATTCGTCTAGGCCTTCCCTTTAGGAATATAAGTTCAATGGCTGAGGCTGGAAGTCCTGGCAGTCAAGACAGTC CACACTCGGATGATTACGGGGGTAACCATGGGAGTGGTGAGAGGGATAACTCCAGCGTTCGCGAGCAGGATCGTTTCCTG CCAATCGCTAATATTAGCCGCATCATGAAGAAGGCGTTGCCTGCTAATGCCAAGATTGCCAAAGATGCGAAGGAGACAGT TCAAGAGTGTGTTTCCGAATTCATCAGTTTCATCACGAGCGAAGCTAGCGACAAGTGTCAGCGGGAAAAGAGAAAGACGA TCAATGGAGATGATTTACTTTGGGCCATGAGCACATTAGGGTTTGAAGACTACGTCGAGCCGCTGAAGGTTTACCTTCAC AAGTACAGAGAGACTGAGGGTGCTCTGACGAACAAGGCTGGTGAATCATCTTCTGGCAAGAAGGAGGGAAGTGGCATGGT ATCTCCTGGCGTTCAGCAAGGAGGCTATAACCCTTACATGCAAGCGCAGATGATGAATCCTGGCAACTACCAGGTTCAAC ATTATTAG |
Microexon DNA seq | ACTGAG |
Microexon Amino Acid seq | TE |
Microexon-tag DNA Seq | TTTGAAGACTACGTCGAGCCGCTGAAGGTTTACCTTCACAAGTACAGAGAGACTGAGGGTGCTCTGACGAACAAGGCTGGTGAATCATCTTCTGGCAAGAAGGAGGGA |
Microexon-tag Amino Acid seq | FEDYVEPLKVYLHKYRETEGALTNKAGESSSGKKEG |
Transcript ID | Pp3c3_14260V3.2 |
Gene ID | Pp.18192 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Pp3c3_14260V3.2 MGKAHSVVPLPNQPPSLPPVARFASVLPLPPSLAPISPSSLSSCSSYIRCRRCCPLLLPLRPPLPSATPDPLSLPSLPPS LLHCLLGILTLLLHRRLALLGRLLSPTHGIRLGLPFRNISSMAEAGSPGSQDSPHSDDYGGNHGSGERDNSSVREQDRFL PIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYLH KYRETEGALTNKAGESSSGKKEGSGMVSPGVQMVQQGGYNPYMQAQMMNPGNYQVQHY* |
CDS seq | >Pp3c3_14260V3.2 ATGGGGAAAGCGCACAGCGTCGTCCCTCTGCCAAACCAGCCTCCCTCTCTCCCTCCTGTTGCCCGCTTTGCCTCCGTGCT ACCCTTGCCTCCCTCCCTCGCACCGATCTCACCCTCCTCCCTCTCTTCCTGCAGCTCATACATACGCTGCAGACGTTGTT GTCCCCTTCTCCTTCCCCTTCGACCTCCCCTTCCCTCCGCCACACCGGACCCCCTCTCCCTTCCCTCCCTCCCTCCCTCC CTTCTTCATTGCCTCCTGGGAATACTTACCCTTTTACTTCATCGGCGTCTCGCTTTGCTGGGCAGGCTCCTCTCTCCAAC CCACGGCATTCGTCTAGGCCTTCCCTTTAGGAATATAAGTTCAATGGCTGAGGCTGGAAGTCCTGGCAGTCAAGACAGTC CACACTCGGATGATTACGGGGGTAACCATGGGAGTGGTGAGAGGGATAACTCCAGCGTTCGCGAGCAGGATCGTTTCCTG CCAATCGCTAATATTAGCCGCATCATGAAGAAGGCGTTGCCTGCTAATGCCAAGATTGCCAAAGATGCGAAGGAGACAGT TCAAGAGTGTGTTTCCGAATTCATCAGTTTCATCACGAGCGAAGCTAGCGACAAGTGTCAGCGGGAAAAGAGAAAGACGA TCAATGGAGATGATTTACTTTGGGCCATGAGCACATTAGGGTTTGAAGACTACGTCGAGCCGCTGAAGGTTTACCTTCAC AAGTACAGAGAGACTGAGGGTGCTCTGACGAACAAGGCTGGTGAATCATCTTCTGGCAAGAAGGAGGGAAGTGGCATGGT ATCTCCTGGCGTTCAGATGGTGCAGCAAGGAGGCTATAACCCTTACATGCAAGCGCAGATGATGAATCCTGGCAACTACC AGGTTCAACATTATTAG |