Microexon ID Pp_3:10167977-10167982:-
Species Physcomitrium patens
Coordinates 3:10167977..10167982
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Pp_3:10167977-10167982:- does not have available information here.
Transcript ID Pp3c3_14260V3.1
Protein ID Pp3c3_14260V3.1
Gene ID Pp3c3_14260
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Pp3c3_14260V3.1
MGKAHSVVPLPNQPPSLPPVARFASVLPLPPSLAPISPSSLSSCSSYIRCRRCCPLLLPLRPPLPSATPDPLSLPSLPPS
LLHCLLGILTLLLHRRLALLGRLLSPTHGIRLGLPFRNISSMAEAGSPGSQDSPHSDDYGGNHGSGERDNSSVREQDRFL
PIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYLH
KYRETEGALTNKAGESSSGKKEGSGMVSPGVQQGGYNPYMQAQMMNPGNYQVQHY*
CDS seq >Pp3c3_14260V3.1
ATGGGGAAAGCGCACAGCGTCGTCCCTCTGCCAAACCAGCCTCCCTCTCTCCCTCCTGTTGCCCGCTTTGCCTCCGTGCT
ACCCTTGCCTCCCTCCCTCGCACCGATCTCACCCTCCTCCCTCTCTTCCTGCAGCTCATACATACGCTGCAGACGTTGTT
GTCCCCTTCTCCTTCCCCTTCGACCTCCCCTTCCCTCCGCCACACCGGACCCCCTCTCCCTTCCCTCCCTCCCTCCCTCC
CTTCTTCATTGCCTCCTGGGAATACTTACCCTTTTACTTCATCGGCGTCTCGCTTTGCTGGGCAGGCTCCTCTCTCCAAC
CCACGGCATTCGTCTAGGCCTTCCCTTTAGGAATATAAGTTCAATGGCTGAGGCTGGAAGTCCTGGCAGTCAAGACAGTC
CACACTCGGATGATTACGGGGGTAACCATGGGAGTGGTGAGAGGGATAACTCCAGCGTTCGCGAGCAGGATCGTTTCCTG
CCAATCGCTAATATTAGCCGCATCATGAAGAAGGCGTTGCCTGCTAATGCCAAGATTGCCAAAGATGCGAAGGAGACAGT
TCAAGAGTGTGTTTCCGAATTCATCAGTTTCATCACGAGCGAAGCTAGCGACAAGTGTCAGCGGGAAAAGAGAAAGACGA
TCAATGGAGATGATTTACTTTGGGCCATGAGCACATTAGGGTTTGAAGACTACGTCGAGCCGCTGAAGGTTTACCTTCAC
AAGTACAGAGAGACTGAGGGTGCTCTGACGAACAAGGCTGGTGAATCATCTTCTGGCAAGAAGGAGGGAAGTGGCATGGT
ATCTCCTGGCGTTCAGCAAGGAGGCTATAACCCTTACATGCAAGCGCAGATGATGAATCCTGGCAACTACCAGGTTCAAC
ATTATTAG
Microexon DNA seq ACTGAG
Microexon Amino Acid seq TE
Microexon-tag DNA Seq TTTGAAGACTACGTCGAGCCGCTGAAGGTTTACCTTCACAAGTACAGAGAGACTGAGGGTGCTCTGACGAACAAGGCTGGTGAATCATCTTCTGGCAAGAAGGAGGGA
Microexon-tag Amino Acid seq FEDYVEPLKVYLHKYRETEGALTNKAGESSSGKKEG
Transcript ID Pp3c3_14260V3.2
Gene ID Pp.18192
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Pp3c3_14260V3.2
MGKAHSVVPLPNQPPSLPPVARFASVLPLPPSLAPISPSSLSSCSSYIRCRRCCPLLLPLRPPLPSATPDPLSLPSLPPS
LLHCLLGILTLLLHRRLALLGRLLSPTHGIRLGLPFRNISSMAEAGSPGSQDSPHSDDYGGNHGSGERDNSSVREQDRFL
PIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYLH
KYRETEGALTNKAGESSSGKKEGSGMVSPGVQMVQQGGYNPYMQAQMMNPGNYQVQHY*
CDS seq >Pp3c3_14260V3.2
ATGGGGAAAGCGCACAGCGTCGTCCCTCTGCCAAACCAGCCTCCCTCTCTCCCTCCTGTTGCCCGCTTTGCCTCCGTGCT
ACCCTTGCCTCCCTCCCTCGCACCGATCTCACCCTCCTCCCTCTCTTCCTGCAGCTCATACATACGCTGCAGACGTTGTT
GTCCCCTTCTCCTTCCCCTTCGACCTCCCCTTCCCTCCGCCACACCGGACCCCCTCTCCCTTCCCTCCCTCCCTCCCTCC
CTTCTTCATTGCCTCCTGGGAATACTTACCCTTTTACTTCATCGGCGTCTCGCTTTGCTGGGCAGGCTCCTCTCTCCAAC
CCACGGCATTCGTCTAGGCCTTCCCTTTAGGAATATAAGTTCAATGGCTGAGGCTGGAAGTCCTGGCAGTCAAGACAGTC
CACACTCGGATGATTACGGGGGTAACCATGGGAGTGGTGAGAGGGATAACTCCAGCGTTCGCGAGCAGGATCGTTTCCTG
CCAATCGCTAATATTAGCCGCATCATGAAGAAGGCGTTGCCTGCTAATGCCAAGATTGCCAAAGATGCGAAGGAGACAGT
TCAAGAGTGTGTTTCCGAATTCATCAGTTTCATCACGAGCGAAGCTAGCGACAAGTGTCAGCGGGAAAAGAGAAAGACGA
TCAATGGAGATGATTTACTTTGGGCCATGAGCACATTAGGGTTTGAAGACTACGTCGAGCCGCTGAAGGTTTACCTTCAC
AAGTACAGAGAGACTGAGGGTGCTCTGACGAACAAGGCTGGTGAATCATCTTCTGGCAAGAAGGAGGGAAGTGGCATGGT
ATCTCCTGGCGTTCAGATGGTGCAGCAAGGAGGCTATAACCCTTACATGCAAGCGCAGATGATGAATCCTGGCAACTACC
AGGTTCAACATTATTAG