
Microexon ID | Os_5:28574014-28574019:+ |
Species | Oryza sativa | Coordinates | 5:28574014..28574019 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Os_5:28574014-28574019:+ does not have available information here.
Transcript ID | Os05t0573500-01 |
Protein ID | Os05t0573500-01 |
Gene ID | Os05g0573500 |
Gene Name | HAP3C |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os05t0573500-01 MSEGFDGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGSRASELPVKKDVVLNGDPGSSFEGM* |
CDS seq | >Os05t0573500-01 ATGTCGGAGGGGTTCGACGGGACGGAGAACGGCGGCGGCGGCGGCGGAGGCGGAGTAGGGAAGGAGCAGGACCGGTTCCT GCCGATCGCCAACATCGGCCGCATCATGCGCCGGGCCGTGCCGGAGAACGGCAAGATCGCCAAGGACTCCAAGGAGTCCG TCCAGGAGTGCGTCTCCGAGTTCATCAGCTTCATCACCAGCGAAGCAAGCGACAAGTGCCTCAAGGAGAAGCGCAAGACC ATCAATGGGGACGACCTGATCTGGTCAATGGGCACGCTCGGATTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAG GCTCTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAAAGATGTTGTACTTAATG GAGATCCTGGATCATCGTTTGAAGGCATGTAG |
Microexon DNA seq | ACGGAG |
Microexon Amino Acid seq | TE |
Microexon-tag DNA Seq | TTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAGGCTCTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAAAGATGTT |
Microexon-tag Amino Acid seq | FEDYVEPLKLYLRLYRETEGDTKGSRASELPVKKDV |
Transcript ID | Os05t0573500-01 |
Gene ID | Os.27653 |
Gene Name | HAP3C |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os05t0573500-01 MSEGFDGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGSRASELPVKKDVVLNGDPGSSFEGM* |
CDS seq | >Os05t0573500-01 ATGTCGGAGGGGTTCGACGGGACGGAGAACGGCGGCGGCGGCGGCGGAGGCGGAGTAGGGAAGGAGCAGGACCGGTTCCT GCCGATCGCCAACATCGGCCGCATCATGCGCCGGGCCGTGCCGGAGAACGGCAAGATCGCCAAGGACTCCAAGGAGTCCG TCCAGGAGTGCGTCTCCGAGTTCATCAGCTTCATCACCAGCGAAGCAAGCGACAAGTGCCTCAAGGAGAAGCGCAAGACC ATCAATGGGGACGACCTGATCTGGTCAATGGGCACGCTCGGATTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAG GCTCTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAAAGATGTTGTACTTAATG GAGATCCTGGATCATCGTTTGAAGGCATGTAG |