Microexon ID Os_5:28574014-28574019:+
Species Oryza sativa
Coordinates 5:28574014..28574019
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Os_5:28574014-28574019:+ does not have available information here.
Transcript ID Os05t0573500-01
Protein ID Os05t0573500-01
Gene ID Os05g0573500
Gene Name HAP3C
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Os05t0573500-01
MSEGFDGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT
INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGSRASELPVKKDVVLNGDPGSSFEGM*
CDS seq >Os05t0573500-01
ATGTCGGAGGGGTTCGACGGGACGGAGAACGGCGGCGGCGGCGGCGGAGGCGGAGTAGGGAAGGAGCAGGACCGGTTCCT
GCCGATCGCCAACATCGGCCGCATCATGCGCCGGGCCGTGCCGGAGAACGGCAAGATCGCCAAGGACTCCAAGGAGTCCG
TCCAGGAGTGCGTCTCCGAGTTCATCAGCTTCATCACCAGCGAAGCAAGCGACAAGTGCCTCAAGGAGAAGCGCAAGACC
ATCAATGGGGACGACCTGATCTGGTCAATGGGCACGCTCGGATTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAG
GCTCTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAAAGATGTTGTACTTAATG
GAGATCCTGGATCATCGTTTGAAGGCATGTAG
Microexon DNA seq ACGGAG
Microexon Amino Acid seq TE
Microexon-tag DNA Seq TTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAGGCTCTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAAAGATGTT
Microexon-tag Amino Acid seq FEDYVEPLKLYLRLYRETEGDTKGSRASELPVKKDV
Transcript ID Os05t0573500-01
Gene ID Os.27653
Gene Name HAP3C
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Os05t0573500-01
MSEGFDGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT
INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGSRASELPVKKDVVLNGDPGSSFEGM*
CDS seq >Os05t0573500-01
ATGTCGGAGGGGTTCGACGGGACGGAGAACGGCGGCGGCGGCGGCGGAGGCGGAGTAGGGAAGGAGCAGGACCGGTTCCT
GCCGATCGCCAACATCGGCCGCATCATGCGCCGGGCCGTGCCGGAGAACGGCAAGATCGCCAAGGACTCCAAGGAGTCCG
TCCAGGAGTGCGTCTCCGAGTTCATCAGCTTCATCACCAGCGAAGCAAGCGACAAGTGCCTCAAGGAGAAGCGCAAGACC
ATCAATGGGGACGACCTGATCTGGTCAATGGGCACGCTCGGATTCGAGGACTATGTCGAGCCTCTCAAGCTCTACCTCAG
GCTCTACCGGGAGACGGAGGGTGACACAAAGGGTTCAAGAGCTTCTGAACTGCCAGTAAAGAAAGATGTTGTACTTAATG
GAGATCCTGGATCATCGTTTGAAGGCATGTAG