
Microexon ID | Os_5:22772394-22772399:- |
Species | Oryza sativa | Coordinates | 5:22772394..22772399 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTCGAGGACTACATCGAGCCCCTCAAGGTCTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAATTAACTGCAAAGGCTGGTGATGGCTCTGTGAAAAAGGAT |
Microexon-tag Amino Acid Seq | FEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKD |
Microexon-tag spanning region | 22771703-22773246 |
Microexon-tag prediction score | 0.9577 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os05t0463800-02x |
Reference Transcript ID | Os05t0463800-02 |
Gene ID | Os05g0463800 |
Gene Name | HAP3B |
Transcript ID | Os05t0463800-02 |
Protein ID | Os05t0463800-02 |
Gene ID | Os05g0463800 |
Gene Name | HAP3B |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os05t0463800-02 MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISF ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQG MGQQAAYNQGMGYMQPQYHNGDVSN* |
CDS seq | >Os05t0463800-02 ATGGCGGATGGGCCGGGGAGCCCGGGGGGAGGAGGGGGGAGCCACGAGAGCGGGAGCCCGAGGGGGGGAGGGGGAGGAGG GGGAGGTGGGGGTGGGGGTGGGGGGGTGAGGGAGCAGGACAGGTTCCTCCCCATCGCCAACATCAGCCGCATCATGAAGA AGGCCATCCCGGCCAACGGGAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTC ATCACCAGCGAGGCGAGCGATAAATGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACTTGCTGTGGGCGATGGC CACGCTGGGCTTCGAGGACTACATCGAGCCCCTCAAGGTCTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAAT TAACTGCAAAGGCTGGTGATGGCTCTGTGAAAAAGGATGTACTTGGTTCTCATGGAGGAAGCAGTTCAAGTGCCCAAGGG ATGGGCCAACAAGCAGCATACAATCAAGGAATGGGTTATATGCAACCTCAGTACCATAATGGGGATGTCTCAAACTGA |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTCGAGGACTACATCGAGCCCCTCAAGGTCTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAATTAACTGCAAAGGCTGGTGATGGCTCTGTGAAAAAGGAT |
Microexon-tag Amino Acid seq | FEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKD |
Transcript ID | Os.26790.1 |
Gene ID | Os.26790 |
Gene Name | HAP3B |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os.26790.1 MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISF ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQG MGQQAAYNQGMGYMQPQYHNGDVSN* |
CDS seq | >Os.26790.1 ATGGCGGATGGGCCGGGGAGCCCGGGGGGAGGAGGGGGGAGCCACGAGAGCGGGAGCCCGAGGGGGGGAGGGGGAGGAGG GGGAGGTGGGGGTGGGGGTGGGGGGGTGAGGGAGCAGGACAGGTTCCTCCCCATCGCCAACATCAGCCGCATCATGAAGA AGGCCATCCCGGCCAACGGGAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTC ATCACCAGCGAGGCGAGCGATAAATGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACTTGCTGTGGGCGATGGC CACGCTGGGCTTCGAGGACTACATCGAGCCCCTCAAGGTCTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAAT TAACTGCAAAGGCTGGTGATGGCTCTGTGAAAAAGGATGTACTTGGTTCTCATGGAGGAAGCAGTTCAAGTGCCCAAGGG ATGGGCCAACAAGCAGCATACAATCAAGGAATGGGTTATATGCAACCTCAGTACCATAATGGGGATGTCTCAAACTGA |