Microexon ID Os_5:22772394-22772399:-
Species Oryza sativa
Coordinates 5:22772394..22772399
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAGGACTACATCGAGCCCCTCAAGGTCTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAATTAACTGCAAAGGCTGGTGATGGCTCTGTGAAAAAGGAT
Microexon-tag Amino Acid Seq FEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKD
Microexon-tag spanning region22771703-22773246
Microexon-tag prediction score0.9577
Overlapped with the annotated transcript (%) 100
New Transcript ID Os05t0463800-02x
Reference Transcript ID Os05t0463800-02
Gene ID Os05g0463800
Gene Name HAP3B
Transcript ID Os05t0463800-02
Protein ID Os05t0463800-02
Gene ID Os05g0463800
Gene Name HAP3B
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Os05t0463800-02
MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISF
ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQG
MGQQAAYNQGMGYMQPQYHNGDVSN*
CDS seq >Os05t0463800-02
ATGGCGGATGGGCCGGGGAGCCCGGGGGGAGGAGGGGGGAGCCACGAGAGCGGGAGCCCGAGGGGGGGAGGGGGAGGAGG
GGGAGGTGGGGGTGGGGGTGGGGGGGTGAGGGAGCAGGACAGGTTCCTCCCCATCGCCAACATCAGCCGCATCATGAAGA
AGGCCATCCCGGCCAACGGGAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTC
ATCACCAGCGAGGCGAGCGATAAATGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACTTGCTGTGGGCGATGGC
CACGCTGGGCTTCGAGGACTACATCGAGCCCCTCAAGGTCTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAAT
TAACTGCAAAGGCTGGTGATGGCTCTGTGAAAAAGGATGTACTTGGTTCTCATGGAGGAAGCAGTTCAAGTGCCCAAGGG
ATGGGCCAACAAGCAGCATACAATCAAGGAATGGGTTATATGCAACCTCAGTACCATAATGGGGATGTCTCAAACTGA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAGGACTACATCGAGCCCCTCAAGGTCTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAATTAACTGCAAAGGCTGGTGATGGCTCTGTGAAAAAGGAT
Microexon-tag Amino Acid seq FEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKD
Transcript ID Os.26790.1
Gene ID Os.26790
Gene Name HAP3B
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Os.26790.1
MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISF
ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQG
MGQQAAYNQGMGYMQPQYHNGDVSN*
CDS seq >Os.26790.1
ATGGCGGATGGGCCGGGGAGCCCGGGGGGAGGAGGGGGGAGCCACGAGAGCGGGAGCCCGAGGGGGGGAGGGGGAGGAGG
GGGAGGTGGGGGTGGGGGTGGGGGGGTGAGGGAGCAGGACAGGTTCCTCCCCATCGCCAACATCAGCCGCATCATGAAGA
AGGCCATCCCGGCCAACGGGAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTC
ATCACCAGCGAGGCGAGCGATAAATGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACTTGCTGTGGGCGATGGC
CACGCTGGGCTTCGAGGACTACATCGAGCCCCTCAAGGTCTACCTGCAGAAGTACAGAGAGATGGAGGGTGATAGTAAAT
TAACTGCAAAGGCTGGTGATGGCTCTGTGAAAAAGGATGTACTTGGTTCTCATGGAGGAAGCAGTTCAAGTGCCCAAGGG
ATGGGCCAACAAGCAGCATACAATCAAGGAATGGGTTATATGCAACCTCAGTACCATAATGGGGATGTCTCAAACTGA