
Microexon ID | Os_1:35757866-35757871:- |
Species | Oryza sativa | Coordinates | 1:35757866..35757871 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTTGAGGAGTACGTTGATCCGTTGAAGATCTATTTACACAAGTACAGAGAGATGGAGGGTGATAGTAAGCTGTCCTCAAAGGCTGGTGATGGTTCAGTAAAGAAGGAT |
Microexon-tag Amino Acid Seq | FEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKD |
Microexon-tag spanning region | 35757370-35758050 |
Microexon-tag prediction score | 0.9336 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os01t0834400-02x |
Reference Transcript ID | Os01t0834400-02 |
Gene ID | Os01g0834400 |
Gene Name | HAP3A |
Transcript ID | Os01t0834400-02 |
Protein ID | Os01t0834400-02 |
Gene ID | Os01g0834400 |
Gene Name | HAP3A |
Pfam domain motif | DUF4788 |
Motif E-value | 0.024 |
Motif start | 76 |
Motif end | 134 |
Protein seq | >Os01t0834400-02 MMMMDLGFLEGGAGMADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSE ASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKDTIGPHSGASSSSAQGMVG AYTQGMGYMQPQYHNGDT* |
CDS seq | >Os01t0834400-02 ATGATGATGATGGATCTAGGGTTTTTGGAGGGCGGCGCGGGGATGGCGGACGCGGGGCACGACGAGAGCGGGAGCCCGCC GAGGAGCGGCGGGGTGAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCGTCCCGG CGAACGGCAAGATCGCCAAGGACGCCAAGGAGACCCTGCAGGAGTGCGTCTCGGAGTTCATCTCCTTCGTCACCAGCGAG GCGAGCGACAAATGTCAGAAGGAGAAGCGCAAGACCATCAACGGGGAAGATCTCCTCTTTGCGATGGGTACGCTTGGCTT TGAGGAGTACGTTGATCCGTTGAAGATCTATTTACACAAGTACAGAGAGATGGAGGGTGATAGTAAGCTGTCCTCAAAGG CTGGTGATGGTTCAGTAAAGAAGGATACAATTGGTCCGCACAGTGGCGCTAGTAGCTCAAGTGCGCAAGGGATGGTTGGG GCTTACACCCAAGGGATGGGTTATATGCAACCTCAGTATCATAATGGGGACACCTAA |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTTGAGGAGTACGTTGATCCGTTGAAGATCTATTTACACAAGTACAGAGAGATGGAGGGTGATAGTAAGCTGTCCTCAAAGGCTGGTGATGGTTCAGTAAAGAAGGAT |
Microexon-tag Amino Acid seq | FEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKD |
Transcript ID | Os.4216.1 |
Gene ID | Os.4216 |
Gene Name | HAP3A |
Pfam domain motif | DUF4788 |
Motif E-value | 0.02 |
Motif start | 62 |
Motif end | 120 |
Protein seq | >Os.4216.1 MADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTIN GEDLLFAMGTLGFEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKDTIGPHSGASSSSAQGMVGAYTQGMGYMQPQYH NGDT* |
CDS seq | >Os.4216.1 ATGGCGGACGCGGGGCACGACGAGAGCGGGAGCCCGCCGAGGAGCGGCGGGGTGAGGGAGCAGGACAGGTTCCTGCCCAT CGCCAACATCAGCCGCATCATGAAGAAGGCCGTCCCGGCGAACGGCAAGATCGCCAAGGACGCCAAGGAGACCCTGCAGG AGTGCGTCTCGGAGTTCATCTCCTTCGTCACCAGCGAGGCGAGCGACAAATGTCAGAAGGAGAAGCGCAAGACCATCAAC GGGGAAGATCTCCTCTTTGCGATGGGTACGCTTGGCTTTGAGGAGTACGTTGATCCGTTGAAGATCTATTTACACAAGTA CAGAGAGATGGAGGGTGATAGTAAGCTGTCCTCAAAGGCTGGTGATGGTTCAGTAAAGAAGGATACAATTGGTCCGCACA GTGGCGCTAGTAGCTCAAGTGCGCAAGGGATGGTTGGGGCTTACACCCAAGGGATGGGTTATATGCAACCTCAGTATCAT AATGGGGACACCTAA |