Microexon ID Os_1:35757866-35757871:-
Species Oryza sativa
Coordinates 1:35757866..35757871
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTTGAGGAGTACGTTGATCCGTTGAAGATCTATTTACACAAGTACAGAGAGATGGAGGGTGATAGTAAGCTGTCCTCAAAGGCTGGTGATGGTTCAGTAAAGAAGGAT
Microexon-tag Amino Acid Seq FEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKD
Microexon-tag spanning region35757370-35758050
Microexon-tag prediction score0.9336
Overlapped with the annotated transcript (%) 100
New Transcript ID Os01t0834400-02x
Reference Transcript ID Os01t0834400-02
Gene ID Os01g0834400
Gene Name HAP3A
Transcript ID Os01t0834400-02
Protein ID Os01t0834400-02
Gene ID Os01g0834400
Gene Name HAP3A
Pfam domain motif DUF4788
Motif E-value 0.024
Motif start 76
Motif end 134
Protein seq >Os01t0834400-02
MMMMDLGFLEGGAGMADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSE
ASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKDTIGPHSGASSSSAQGMVG
AYTQGMGYMQPQYHNGDT*
CDS seq >Os01t0834400-02
ATGATGATGATGGATCTAGGGTTTTTGGAGGGCGGCGCGGGGATGGCGGACGCGGGGCACGACGAGAGCGGGAGCCCGCC
GAGGAGCGGCGGGGTGAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCGTCCCGG
CGAACGGCAAGATCGCCAAGGACGCCAAGGAGACCCTGCAGGAGTGCGTCTCGGAGTTCATCTCCTTCGTCACCAGCGAG
GCGAGCGACAAATGTCAGAAGGAGAAGCGCAAGACCATCAACGGGGAAGATCTCCTCTTTGCGATGGGTACGCTTGGCTT
TGAGGAGTACGTTGATCCGTTGAAGATCTATTTACACAAGTACAGAGAGATGGAGGGTGATAGTAAGCTGTCCTCAAAGG
CTGGTGATGGTTCAGTAAAGAAGGATACAATTGGTCCGCACAGTGGCGCTAGTAGCTCAAGTGCGCAAGGGATGGTTGGG
GCTTACACCCAAGGGATGGGTTATATGCAACCTCAGTATCATAATGGGGACACCTAA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTTGAGGAGTACGTTGATCCGTTGAAGATCTATTTACACAAGTACAGAGAGATGGAGGGTGATAGTAAGCTGTCCTCAAAGGCTGGTGATGGTTCAGTAAAGAAGGAT
Microexon-tag Amino Acid seq FEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKD
Transcript ID Os.4216.1
Gene ID Os.4216
Gene Name HAP3A
Pfam domain motif DUF4788
Motif E-value 0.02
Motif start 62
Motif end 120
Protein seq >Os.4216.1
MADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTIN
GEDLLFAMGTLGFEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKDTIGPHSGASSSSAQGMVGAYTQGMGYMQPQYH
NGDT*
CDS seq >Os.4216.1
ATGGCGGACGCGGGGCACGACGAGAGCGGGAGCCCGCCGAGGAGCGGCGGGGTGAGGGAGCAGGACAGGTTCCTGCCCAT
CGCCAACATCAGCCGCATCATGAAGAAGGCCGTCCCGGCGAACGGCAAGATCGCCAAGGACGCCAAGGAGACCCTGCAGG
AGTGCGTCTCGGAGTTCATCTCCTTCGTCACCAGCGAGGCGAGCGACAAATGTCAGAAGGAGAAGCGCAAGACCATCAAC
GGGGAAGATCTCCTCTTTGCGATGGGTACGCTTGGCTTTGAGGAGTACGTTGATCCGTTGAAGATCTATTTACACAAGTA
CAGAGAGATGGAGGGTGATAGTAAGCTGTCCTCAAAGGCTGGTGATGGTTCAGTAAAGAAGGATACAATTGGTCCGCACA
GTGGCGCTAGTAGCTCAAGTGCGCAAGGGATGGTTGGGGCTTACACCCAAGGGATGGGTTATATGCAACCTCAGTATCAT
AATGGGGACACCTAA