Microexon ID Hv_3H:553152429-553152434:+
Species Hordeum   Vulgare
Coordinates 3H:553152429..553152434
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAGGAGTACGTAGACCCCCTCAAGATCTACCTGCAAAAGTACAGAGATATGGAGGGTGATAGTAAATTGACCTCAAAATCTGGTGATGGATCCGTGAAGAAAGAT
Microexon-tag Amino Acid Seq FEEYVDPLKIYLQKYRDMEGDSKLTSKSGDGSVKKD
Microexon-tag spanning region553152244-553152951
Microexon-tag prediction score0.9214
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.3HG0303530.1x
Reference Transcript ID HORVU.MOREX.r3.3HG0303530.1
Gene ID HORVU.MOREX.r3.3HG0303530
Gene Name NA
Transcript ID HORVU.MOREX.r3.3HG0303530.1
Protein ID
Gene ID HORVU.MOREX.r3.3HG0303530
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >HORVU.MOREX.r3.3HG0303530.1
MADDDSGSPRGGGGGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTING
DDLLWAMATLGFEEYVDPLKIYLQKYRDMEGDSKLTSKSGDGSVKKDIIGAHGGATSSNAQVMVQHGAYAQGMGYMQPQY
HNGDT*
CDS seq >HORVU.MOREX.r3.3HG0303530.1
ATGGCCGACGACGACAGCGGCAGCCCCCGGGGCGGCGGCGGCGGCGGGGTCCGGGAGCAGGACCGCTTCCTCCCCATCGC
CAACATCAGCCGCATCATGAAGAAGGCCGTGCCGGCCAACGGCAAGATCGCCAAGGACGCCAAGGAGACCCTCCAGGAGT
GCGTCTCCGAGTTCATCTCCTTCGTCACCAGCGAGGCCAGCGACAAGTGCCAGAAGGAGAAGCGCAAGACCATCAACGGG
GACGATCTGCTCTGGGCCATGGCCACGCTCGGGTTCGAGGAGTACGTAGACCCCCTCAAGATCTACCTGCAAAAGTACAG
AGATATGGAGGGTGATAGTAAATTGACCTCAAAATCTGGTGATGGATCCGTGAAGAAAGATATAATTGGTGCTCATGGTG
GTGCGACTAGCTCAAACGCCCAAGTGATGGTTCAGCATGGTGCTTACGCCCAAGGCATGGGTTATATGCAACCCCAGTAC
CATAATGGGGATACCTGA
Hv_3H:553152429-553152434:+ does not have available information here.