
Microexon ID | Hv_1H:460232065-460232070:+ |
Species | Hordeum Vulgare | Coordinates | 1H:460232065..460232070 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACGGAG |
Microexon Amino Acid seq | TE |
Microexon-tag DNA Seq | TTTGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGAAGTCTGGCGACGTCTCTGTTAAAAAGGAT |
Microexon-tag Amino Acid Seq | FEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKD |
Microexon-tag spanning region | 460231275-460233010 |
Microexon-tag prediction score | 0.9401 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.1HG0072890.2x |
Reference Transcript ID | HORVU.MOREX.r3.1HG0072890.2 |
Gene ID | HORVU.MOREX.r3.1HG0072890 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.1HG0072890.2 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.1HG0072890 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >HORVU.MOREX.r3.1HG0072890.2 MSDAPASPPGGGNGGGGGGVGSDDGGGGGYGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITS EASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKDALGPHGGASAQGMGQQV AYNPGMVYMQPQYHNGDISN* |
CDS seq | >HORVU.MOREX.r3.1HG0072890.2 ATGTCGGACGCGCCGGCGAGCCCCCCGGGCGGCGGGAACGGGGGAGGAGGGGGAGGGGTGGGCAGCGACGACGGCGGCGG CGGCGGATATGGCGGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCATCC CGGCCAACGGCAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTCATCACCAGC GAGGCCAGCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACCTGCTCTGGGCGATGGCCACGCTCGG GTTTGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGA AGTCTGGCGACGTCTCTGTTAAAAAGGATGCACTTGGTCCTCATGGAGGAGCAAGTGCGCAAGGGATGGGCCAACAAGTA GCATACAATCCAGGAATGGTTTATATGCAACCTCAGTACCATAATGGGGACATCTCAAACTGA |
Hv_1H:460232065-460232070:+ does not have available information here.