Microexon ID Hv_1H:460232065-460232070:+
Species Hordeum   Vulgare
Coordinates 1H:460232065..460232070
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACGGAG
Microexon Amino Acid seq TE
Microexon-tag DNA Seq TTTGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGAAGTCTGGCGACGTCTCTGTTAAAAAGGAT
Microexon-tag Amino Acid Seq FEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKD
Microexon-tag spanning region460231275-460233010
Microexon-tag prediction score0.9401
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.1HG0072890.2x
Reference Transcript ID HORVU.MOREX.r3.1HG0072890.2
Gene ID HORVU.MOREX.r3.1HG0072890
Gene Name NA
Transcript ID HORVU.MOREX.r3.1HG0072890.2
Protein ID
Gene ID HORVU.MOREX.r3.1HG0072890
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >HORVU.MOREX.r3.1HG0072890.2
MSDAPASPPGGGNGGGGGGVGSDDGGGGGYGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITS
EASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRETEGDSKLAGKSGDVSVKKDALGPHGGASAQGMGQQV
AYNPGMVYMQPQYHNGDISN*
CDS seq >HORVU.MOREX.r3.1HG0072890.2
ATGTCGGACGCGCCGGCGAGCCCCCCGGGCGGCGGGAACGGGGGAGGAGGGGGAGGGGTGGGCAGCGACGACGGCGGCGG
CGGCGGATATGGCGGCGTCAGGGAGCAGGACAGGTTCCTGCCCATCGCCAACATCAGCCGCATCATGAAGAAGGCCATCC
CGGCCAACGGCAAGATCGCCAAGGACGCCAAGGAGACCGTGCAGGAGTGCGTCTCCGAGTTCATCTCCTTCATCACCAGC
GAGGCCAGCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGACCTGCTCTGGGCGATGGCCACGCTCGG
GTTTGAGGAGTACATCGAGCCCCTCAAGGTTTATCTGCAGAAGTACAGAGAGACGGAGGGTGATAGTAAGCTAGCTGGGA
AGTCTGGCGACGTCTCTGTTAAAAAGGATGCACTTGGTCCTCATGGAGGAGCAAGTGCGCAAGGGATGGGCCAACAAGTA
GCATACAATCCAGGAATGGTTTATATGCAACCTCAGTACCATAATGGGGACATCTCAAACTGA
Hv_1H:460232065-460232070:+ does not have available information here.