
Microexon ID | Ha_9:62788162-62788167:- |
Species | Helianthus annuus | Coordinates | 9:62788162..62788167 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTAGAG |
Microexon Amino Acid seq | LE |
Microexon-tag DNA Seq | TTCGAAGATTACATTGATCCACTCAAAGCTTACCTATCTAGGTACAGAGAGTTAGAGGGTGATAGTAAGGGGTCGGGTAGGGGTGGAGATGGATCTGGTAAGAAAGAT |
Microexon-tag Amino Acid Seq | FEDYIDPLKAYLSRYRELEGDSKGSGRGGDGSGKKD |
Microexon-tag spanning region | 62788029-62788612 |
Microexon-tag prediction score | 0.965 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG14183x |
Reference Transcript ID | OTG14183 |
Gene ID | HannXRQ_Chr09g0246541 |
Gene Name | NA |
Transcript ID | OTG14183 |
Protein ID | OTG14183 |
Gene ID | HannXRQ_Chr09g0246541 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >OTG14183 MKKALPTNGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLSRYRELEGD SKGSGRGGDGSGKKDTIESQLASNAQVIYSSRFFYTRHELCEFSRLNFQARGSWEHHLAVHLCKPNTRRTFKLCVY* |
CDS seq | >OTG14183 ATGAAAAAGGCGTTGCCCACCAACGGGAAGATTGCCAAGGATGCCAAGGATACGGTGCAGGAATGCGTTTCTGAGTTTAT CAGTTTCATCACTAGCGAGGCTAGTGACAAATGCCAGAAAGAGAAAAGGAAGACGATCAACGGTGATGACTTGTTGTGGG CGATGGCTACTTTAGGCTTCGAAGATTACATTGATCCACTCAAAGCTTACCTATCTAGGTACAGAGAGTTAGAGGGTGAT AGTAAGGGGTCGGGTAGGGGTGGAGATGGATCTGGTAAGAAAGATACTATTGAATCTCAACTTGCTTCTAATGCACAGGT GATTTACTCATCAAGGTTCTTTTACACAAGGCATGAACTTTGTGAATTCTCACGTCTGAACTTTCAGGCAAGGGGGAGCT GGGAGCATCATCTTGCTGTTCACTTATGCAAGCCAAACACTCGTCGAACTTTCAAGCTTTGTGTTTACTGA |
Microexon DNA seq | TTAGAG |
Microexon Amino Acid seq | LE |
Microexon-tag DNA Seq | TTCGAAGATTACATTGATCCACTCAAAGCTTACCTATCTAGGTACAGAGAGTTAGAGGGTGATAGTAAGGGGTCGGGTAGGGGTGGAGATGGATCTGGTAAGAAAGAT |
Microexon-tag Amino Acid seq | FEDYIDPLKAYLSRYRELEGDSKGSGRGGDGSGKKD |
Transcript ID | Ha.55414.2 |
Gene ID | Ha.55414 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Ha.55414.2 MADGPGSPAGGSQSGGDRSPQSNYNIREQDRFLPIANISRIMKKALPTNGKIAKDAKDTVQECVSEFISFITSEASDKCQ KEKRKTINGDDLLWAMATLGFEDYIDPLKAYLSRYRELEGDSKGSGRGGDGSGKKDTIESQLASNAQFTHQGSFTQGMNF VNSHV* |
CDS seq | >Ha.55414.2 ATGGCGGACGGTCCTGGTAGTCCGGCCGGTGGTAGTCAGAGCGGCGGAGACAGGAGTCCTCAGTCGAATTATAATATTAG AGAGCAGGATAGGTTTTTGCCCATTGCGAATATCAGTAGGATTATGAAAAAGGCGTTGCCCACCAACGGGAAGATTGCCA AGGATGCCAAGGATACGGTGCAGGAATGCGTTTCTGAGTTTATCAGTTTCATCACTAGCGAGGCTAGTGACAAATGCCAG AAAGAGAAAAGGAAGACGATCAACGGTGATGACTTGTTGTGGGCGATGGCTACTTTAGGCTTCGAAGATTACATTGATCC ACTCAAAGCTTACCTATCTAGGTACAGAGAGTTAGAGGGTGATAGTAAGGGGTCGGGTAGGGGTGGAGATGGATCTGGTA AGAAAGATACTATTGAATCTCAACTTGCTTCTAATGCACAGTTTACTCATCAAGGTTCTTTTACACAAGGCATGAACTTT GTGAATTCTCACGTCTGA |