
Microexon ID | Ha_1:143109750-143109755:+ |
Species | Helianthus annuus | Coordinates | 1:143109750..143109755 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTCGAAGATTATATCGAACCACTCAAGTTATACTTGACTAGATACAGAGAGATGGAGGGTGACACCAAGGGATCTGCAAAAGGCCACGAAGGACTGGTTAGGAGAGAC |
Microexon-tag Amino Acid Seq | FEDYIEPLKLYLTRYREMEGDTKGSAKGHEGLVRRD |
Microexon-tag spanning region | 143109577-143109892 |
Microexon-tag prediction score | 0.9395 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG38210x |
Reference Transcript ID | OTG38210 |
Gene ID | HannXRQ_Chr01g0027251 |
Gene Name | NA |
Transcript ID | OTG38210 |
Protein ID | OTG38210 |
Gene ID | HannXRQ_Chr01g0027251 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >OTG38210 MQENQTNGVDKSELRISIVSFLLRSPASDLSSPSSSTLGAQISPSITGFWGFGVWMAEGPASPGGGGSHESGGDLSPRSS NVREQDRFLPIANISRIMKKGLPANGKMSKDAKETVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDY IEPLKLYLTRYREMEGDTKGSAKGHEGLVRRDGGQPDHNAHLAHQGSYLQGLDYGSSQGQHVVPMQGRD* |
CDS seq | >OTG38210 ATGCAAGAAAACCAAACCAACGGTGTTGATAAATCAGAGCTTCGCATCTCAATCGTCTCCTTTCTCCTTCGTTCTCCAGC GTCGGATCTCTCATCGCCCTCTTCATCCACCCTTGGCGCCCAAATTTCTCCCTCCATAACAGGGTTTTGGGGTTTTGGTG TTTGGATGGCGGAGGGTCCAGCTAGTCCAGGTGGCGGTGGGAGTCACGAGAGTGGGGGGGACCTGAGCCCGAGGTCGTCA AATGTTCGAGAACAGGATCGGTTTTTGCCAATTGCGAATATCAGTCGGATTATGAAGAAAGGGTTACCGGCTAATGGCAA AATGTCAAAGGATGCAAAGGAGACTGTTCAGGAGTGTGTTTCTGAGTTTATCAGCTTTGTCACTAGTGAGGCGAGTGATA AGTGTCAAAGGGAAAAGAGGAAAACTATCAACGGTGATGATCTTCTATGGGCAATGGCTACCTTAGGGTTCGAAGATTAT ATCGAACCACTCAAGTTATACTTGACTAGATACAGAGAGATGGAGGGTGACACCAAGGGATCTGCAAAAGGCCACGAAGG ACTGGTTAGGAGAGACGGGGGGCAACCTGATCATAACGCACATCTTGCTCATCAAGGTTCGTACTTGCAGGGTCTGGATT ACGGGAGCTCACAGGGTCAACATGTGGTTCCAATGCAAGGCAGAGATTAA |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTCGAAGATTATATCGAACCACTCAAGTTATACTTGACTAGATACAGAGAGATGGAGGGTGACACCAAGGGATCTGCAAAAGGCCACGAAGGACTGGTTAGGAGAGAC |
Microexon-tag Amino Acid seq | FEDYIEPLKLYLTRYREMEGDTKGSAKGHEGLVRRD |
Transcript ID | OTG38210 |
Gene ID | Ha.2797 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >OTG38210 MQENQTNGVDKSELRISIVSFLLRSPASDLSSPSSSTLGAQISPSITGFWGFGVWMAEGPASPGGGGSHESGGDLSPRSS NVREQDRFLPIANISRIMKKGLPANGKMSKDAKETVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDY IEPLKLYLTRYREMEGDTKGSAKGHEGLVRRDGGQPDHNAHLAHQGSYLQGLDYGSSQGQHVVPMQGRD* |
CDS seq | >OTG38210 ATGCAAGAAAACCAAACCAACGGTGTTGATAAATCAGAGCTTCGCATCTCAATCGTCTCCTTTCTCCTTCGTTCTCCAGC GTCGGATCTCTCATCGCCCTCTTCATCCACCCTTGGCGCCCAAATTTCTCCCTCCATAACAGGGTTTTGGGGTTTTGGTG TTTGGATGGCGGAGGGTCCAGCTAGTCCAGGTGGCGGTGGGAGTCACGAGAGTGGGGGGGACCTGAGCCCGAGGTCGTCA AATGTTCGAGAACAGGATCGGTTTTTGCCAATTGCGAATATCAGTCGGATTATGAAGAAAGGGTTACCGGCTAATGGCAA AATGTCAAAGGATGCAAAGGAGACTGTTCAGGAGTGTGTTTCTGAGTTTATCAGCTTTGTCACTAGTGAGGCGAGTGATA AGTGTCAAAGGGAAAAGAGGAAAACTATCAACGGTGATGATCTTCTATGGGCAATGGCTACCTTAGGGTTCGAAGATTAT ATCGAACCACTCAAGTTATACTTGACTAGATACAGAGAGATGGAGGGTGACACCAAGGGATCTGCAAAAGGCCACGAAGG ACTGGTTAGGAGAGACGGGGGGCAACCTGATCATAACGCACATCTTGCTCATCAAGGTTCGTACTTGCAGGGTCTGGATT ACGGGAGCTCACAGGGTCAACATGTGGTTCCAATGCAAGGCAGAGATTAA |