Microexon ID Ha_1:143109750-143109755:+
Species Helianthus annuus
Coordinates 1:143109750..143109755
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAAGATTATATCGAACCACTCAAGTTATACTTGACTAGATACAGAGAGATGGAGGGTGACACCAAGGGATCTGCAAAAGGCCACGAAGGACTGGTTAGGAGAGAC
Microexon-tag Amino Acid Seq FEDYIEPLKLYLTRYREMEGDTKGSAKGHEGLVRRD
Microexon-tag spanning region143109577-143109892
Microexon-tag prediction score0.9395
Overlapped with the annotated transcript (%) 100
New Transcript ID OTG38210x
Reference Transcript ID OTG38210
Gene ID HannXRQ_Chr01g0027251
Gene Name NA
Transcript ID OTG38210
Protein ID OTG38210
Gene ID HannXRQ_Chr01g0027251
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >OTG38210
MQENQTNGVDKSELRISIVSFLLRSPASDLSSPSSSTLGAQISPSITGFWGFGVWMAEGPASPGGGGSHESGGDLSPRSS
NVREQDRFLPIANISRIMKKGLPANGKMSKDAKETVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDY
IEPLKLYLTRYREMEGDTKGSAKGHEGLVRRDGGQPDHNAHLAHQGSYLQGLDYGSSQGQHVVPMQGRD*
CDS seq >OTG38210
ATGCAAGAAAACCAAACCAACGGTGTTGATAAATCAGAGCTTCGCATCTCAATCGTCTCCTTTCTCCTTCGTTCTCCAGC
GTCGGATCTCTCATCGCCCTCTTCATCCACCCTTGGCGCCCAAATTTCTCCCTCCATAACAGGGTTTTGGGGTTTTGGTG
TTTGGATGGCGGAGGGTCCAGCTAGTCCAGGTGGCGGTGGGAGTCACGAGAGTGGGGGGGACCTGAGCCCGAGGTCGTCA
AATGTTCGAGAACAGGATCGGTTTTTGCCAATTGCGAATATCAGTCGGATTATGAAGAAAGGGTTACCGGCTAATGGCAA
AATGTCAAAGGATGCAAAGGAGACTGTTCAGGAGTGTGTTTCTGAGTTTATCAGCTTTGTCACTAGTGAGGCGAGTGATA
AGTGTCAAAGGGAAAAGAGGAAAACTATCAACGGTGATGATCTTCTATGGGCAATGGCTACCTTAGGGTTCGAAGATTAT
ATCGAACCACTCAAGTTATACTTGACTAGATACAGAGAGATGGAGGGTGACACCAAGGGATCTGCAAAAGGCCACGAAGG
ACTGGTTAGGAGAGACGGGGGGCAACCTGATCATAACGCACATCTTGCTCATCAAGGTTCGTACTTGCAGGGTCTGGATT
ACGGGAGCTCACAGGGTCAACATGTGGTTCCAATGCAAGGCAGAGATTAA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAAGATTATATCGAACCACTCAAGTTATACTTGACTAGATACAGAGAGATGGAGGGTGACACCAAGGGATCTGCAAAAGGCCACGAAGGACTGGTTAGGAGAGAC
Microexon-tag Amino Acid seq FEDYIEPLKLYLTRYREMEGDTKGSAKGHEGLVRRD
Transcript ID OTG38210
Gene ID Ha.2797
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >OTG38210
MQENQTNGVDKSELRISIVSFLLRSPASDLSSPSSSTLGAQISPSITGFWGFGVWMAEGPASPGGGGSHESGGDLSPRSS
NVREQDRFLPIANISRIMKKGLPANGKMSKDAKETVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDY
IEPLKLYLTRYREMEGDTKGSAKGHEGLVRRDGGQPDHNAHLAHQGSYLQGLDYGSSQGQHVVPMQGRD*
CDS seq >OTG38210
ATGCAAGAAAACCAAACCAACGGTGTTGATAAATCAGAGCTTCGCATCTCAATCGTCTCCTTTCTCCTTCGTTCTCCAGC
GTCGGATCTCTCATCGCCCTCTTCATCCACCCTTGGCGCCCAAATTTCTCCCTCCATAACAGGGTTTTGGGGTTTTGGTG
TTTGGATGGCGGAGGGTCCAGCTAGTCCAGGTGGCGGTGGGAGTCACGAGAGTGGGGGGGACCTGAGCCCGAGGTCGTCA
AATGTTCGAGAACAGGATCGGTTTTTGCCAATTGCGAATATCAGTCGGATTATGAAGAAAGGGTTACCGGCTAATGGCAA
AATGTCAAAGGATGCAAAGGAGACTGTTCAGGAGTGTGTTTCTGAGTTTATCAGCTTTGTCACTAGTGAGGCGAGTGATA
AGTGTCAAAGGGAAAAGAGGAAAACTATCAACGGTGATGATCTTCTATGGGCAATGGCTACCTTAGGGTTCGAAGATTAT
ATCGAACCACTCAAGTTATACTTGACTAGATACAGAGAGATGGAGGGTGACACCAAGGGATCTGCAAAAGGCCACGAAGG
ACTGGTTAGGAGAGACGGGGGGCAACCTGATCATAACGCACATCTTGCTCATCAAGGTTCGTACTTGCAGGGTCTGGATT
ACGGGAGCTCACAGGGTCAACATGTGGTTCCAATGCAAGGCAGAGATTAA