
Microexon ID | Gm_10:42452047-42452052:+ |
Species | Glycine max | Coordinates | 10:42452047..42452052 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCGGAG |
Microexon Amino Acid seq | AE |
Microexon-tag DNA Seq | TTTGAAGACTACATTGAGCCGCTTAAGGTGTACCTGGCTAGGTACAGAGAGGCGGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTAGACCAGAT |
Microexon-tag Amino Acid Seq | FEDYIEPLKVYLARYREAEGDTKGSARSGDGSARPD |
Microexon-tag spanning region | 42451531-42452206 |
Microexon-tag prediction score | 0.9618 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH34567x |
Reference Transcript ID | KRH34567 |
Gene ID | GLYMA_10G192000 |
Gene Name | NA |
Transcript ID | KRH34567 |
Protein ID | KRH34567 |
Gene ID | GLYMA_10G192000 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRH34567 MSDAPASPSHESGGEQSPRGSLSGAAREQDRYLPIANISRIMKKALPPNGKIAKDAKDTMQECVSEFISFITSEASEKCQ KEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREAEGDTKGSARSGDGSARPDQVGLAGQNAQLVHQGSLNYIGLQV QPQHLVMPSMQGHE* |
CDS seq | >KRH34567 ATGTCGGATGCACCGGCGAGTCCGAGTCACGAGAGTGGTGGCGAGCAGAGCCCTCGCGGCTCGTTGTCCGGCGCGGCTAG AGAGCAGGACCGGTACCTTCCCATTGCCAACATCAGCCGCATCATGAAGAAGGCTCTGCCTCCCAATGGCAAGATTGCGA AGGATGCAAAAGACACAATGCAAGAATGCGTTTCTGAATTCATCAGCTTCATTACCAGCGAGGCGAGTGAGAAATGCCAG AAGGAGAAGAGAAAGACAATCAATGGAGACGATTTACTATGGGCCATGGCAACTTTAGGGTTTGAAGACTACATTGAGCC GCTTAAGGTGTACCTGGCTAGGTACAGAGAGGCGGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTA GACCAGATCAAGTTGGCCTTGCAGGTCAAAATGCTCAGCTTGTTCATCAGGGTTCGCTGAACTATATTGGTTTGCAGGTG CAACCACAACATCTGGTTATGCCTTCAATGCAAGGCCATGAATAG |
Microexon DNA seq | GCGGAG |
Microexon Amino Acid seq | AE |
Microexon-tag DNA Seq | TTTGAAGACTACATTGAGCCGCTTAAGGTGTACCTGGCTAGGTACAGAGAGGCGGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTAGACCAGAT |
Microexon-tag Amino Acid seq | FEDYIEPLKVYLARYREAEGDTKGSARSGDGSARPD |
Transcript ID | Gm.4235.1 |
Gene ID | Gm.4235 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Gm.4235.1 MSDAPASPSHESGGEQSPRGSLSGAAREQDRYLPIANISRIMKKALPPNGKIAKDAKDTMQECVSEFISFITSEASEKCQ KEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREAEGDTKGSARSGDGSARPDQVGLAGQNAQLVHQGSLNYIGLQV QPQHLVMPSMQGHE* |
CDS seq | >Gm.4235.1 ATGTCGGATGCACCGGCGAGTCCGAGTCACGAGAGTGGTGGCGAGCAGAGCCCTCGCGGCTCGTTGTCCGGCGCGGCTAG AGAGCAGGACCGGTACCTTCCCATTGCCAACATCAGCCGCATCATGAAGAAGGCTCTGCCTCCCAATGGCAAGATTGCGA AGGATGCAAAAGACACAATGCAAGAATGCGTTTCTGAATTCATCAGCTTCATTACCAGCGAGGCGAGTGAGAAATGCCAG AAGGAGAAGAGAAAGACAATCAATGGAGACGATTTACTATGGGCCATGGCAACTTTAGGGTTTGAAGACTACATTGAGCC GCTTAAGGTGTACCTGGCTAGGTACAGAGAGGCGGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTA GACCAGATCAAGTTGGCCTTGCAGGTCAAAATGCTCAGCTTGTTCATCAGGGTTCGCTGAACTATATTGGTTTGCAGGTG CAACCACAACATCTGGTTATGCCTTCAATGCAAGGCCATGAATAG |