Microexon ID Gm_10:42452047-42452052:+
Species Glycine max
Coordinates 10:42452047..42452052
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCGGAG
Microexon Amino Acid seq AE
Microexon-tag DNA Seq TTTGAAGACTACATTGAGCCGCTTAAGGTGTACCTGGCTAGGTACAGAGAGGCGGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTAGACCAGAT
Microexon-tag Amino Acid Seq FEDYIEPLKVYLARYREAEGDTKGSARSGDGSARPD
Microexon-tag spanning region42451531-42452206
Microexon-tag prediction score0.9618
Overlapped with the annotated transcript (%) 100
New Transcript ID KRH34567x
Reference Transcript ID KRH34567
Gene ID GLYMA_10G192000
Gene Name NA
Transcript ID KRH34567
Protein ID KRH34567
Gene ID GLYMA_10G192000
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >KRH34567
MSDAPASPSHESGGEQSPRGSLSGAAREQDRYLPIANISRIMKKALPPNGKIAKDAKDTMQECVSEFISFITSEASEKCQ
KEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREAEGDTKGSARSGDGSARPDQVGLAGQNAQLVHQGSLNYIGLQV
QPQHLVMPSMQGHE*
CDS seq >KRH34567
ATGTCGGATGCACCGGCGAGTCCGAGTCACGAGAGTGGTGGCGAGCAGAGCCCTCGCGGCTCGTTGTCCGGCGCGGCTAG
AGAGCAGGACCGGTACCTTCCCATTGCCAACATCAGCCGCATCATGAAGAAGGCTCTGCCTCCCAATGGCAAGATTGCGA
AGGATGCAAAAGACACAATGCAAGAATGCGTTTCTGAATTCATCAGCTTCATTACCAGCGAGGCGAGTGAGAAATGCCAG
AAGGAGAAGAGAAAGACAATCAATGGAGACGATTTACTATGGGCCATGGCAACTTTAGGGTTTGAAGACTACATTGAGCC
GCTTAAGGTGTACCTGGCTAGGTACAGAGAGGCGGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTA
GACCAGATCAAGTTGGCCTTGCAGGTCAAAATGCTCAGCTTGTTCATCAGGGTTCGCTGAACTATATTGGTTTGCAGGTG
CAACCACAACATCTGGTTATGCCTTCAATGCAAGGCCATGAATAG
Microexon DNA seq GCGGAG
Microexon Amino Acid seq AE
Microexon-tag DNA Seq TTTGAAGACTACATTGAGCCGCTTAAGGTGTACCTGGCTAGGTACAGAGAGGCGGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTAGACCAGAT
Microexon-tag Amino Acid seq FEDYIEPLKVYLARYREAEGDTKGSARSGDGSARPD
Transcript ID Gm.4235.1
Gene ID Gm.4235
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Gm.4235.1
MSDAPASPSHESGGEQSPRGSLSGAAREQDRYLPIANISRIMKKALPPNGKIAKDAKDTMQECVSEFISFITSEASEKCQ
KEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREAEGDTKGSARSGDGSARPDQVGLAGQNAQLVHQGSLNYIGLQV
QPQHLVMPSMQGHE*
CDS seq >Gm.4235.1
ATGTCGGATGCACCGGCGAGTCCGAGTCACGAGAGTGGTGGCGAGCAGAGCCCTCGCGGCTCGTTGTCCGGCGCGGCTAG
AGAGCAGGACCGGTACCTTCCCATTGCCAACATCAGCCGCATCATGAAGAAGGCTCTGCCTCCCAATGGCAAGATTGCGA
AGGATGCAAAAGACACAATGCAAGAATGCGTTTCTGAATTCATCAGCTTCATTACCAGCGAGGCGAGTGAGAAATGCCAG
AAGGAGAAGAGAAAGACAATCAATGGAGACGATTTACTATGGGCCATGGCAACTTTAGGGTTTGAAGACTACATTGAGCC
GCTTAAGGTGTACCTGGCTAGGTACAGAGAGGCGGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTA
GACCAGATCAAGTTGGCCTTGCAGGTCAAAATGCTCAGCTTGTTCATCAGGGTTCGCTGAACTATATTGGTTTGCAGGTG
CAACCACAACATCTGGTTATGCCTTCAATGCAAGGCCATGAATAG