Microexon ID At_3:19775363-19775368:-
Species Arabidopsis thaliana
Coordinates 3:19775363..19775368
Microexon Cluster ID MEP10
Size 6
Phase 0
Pfam Domain Motif DUF4788
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,6,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAAGATTACATCGATCCCCTCAAGGTTTACCTGATGCGATATAGAGAGATGGAGGGTGACACTAAAGGATCAGGAAAAGGCGGGGAATCGAGTGCAAAGAGAGAT
Microexon-tag Amino Acid Seq FEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRD
Microexon-tag spanning region19775176-19775527
Microexon-tag prediction score0.9385
Overlapped with the annotated transcript (%) 100
New Transcript ID AT3G53340.1x
Reference Transcript ID AT3G53340.1
Gene ID AT3G53340
Gene Name NFYB10
Transcript ID AT3G53340.1
Protein ID AT3G53340.1
Gene ID AT3G53340
Gene Name NFYB10
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >AT3G53340.1
MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKC
QREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPY
GNSQGSNMMVQMPGTE*
CDS seq >AT3G53340.1
ATGGCCGAATCGCAAACCGGTGGTGGTGGTGGTGGAAGCCATGAGAGTGGCGGTGATCAGAGCCCGAGGTCTTTGAATGT
TCGTGAGCAGGACAGGTTTCTTCCGATTGCTAACATAAGCCGTATCATGAAGAGAGGTTTACCTCTAAATGGCAAAATCG
CTAAAGATGCTAAAGAGACTATGCAGGAATGTGTCTCTGAATTCATCAGCTTCGTCACCAGCGAGGCTAGTGATAAGTGC
CAAAGAGAGAAAAGGAAGACCATCAATGGAGATGATTTGCTTTGGGCTATGGCCACTTTAGGATTCGAAGATTACATCGA
TCCCCTCAAGGTTTACCTGATGCGATATAGAGAGATGGAGGGTGACACTAAAGGATCAGGAAAAGGCGGGGAATCGAGTG
CAAAGAGAGATGGTCAACCAAGCCAAGTGTCTCAGTTCTCGCAGGTTCCTCAACAAGGCTCATTCTCACAGGGTCCTTAT
GGAAACTCTCAAGGTTCGAATATGATGGTTCAAATGCCGGGCACAGAGTAG
Microexon DNA seq ATGGAG
Microexon Amino Acid seq ME
Microexon-tag DNA Seq TTCGAAGATTACATCGATCCCCTCAAGGTTTACCTGATGCGATATAGAGAGATGGAGGGTGACACTAAAGGATCAGGAAAAGGCGGGGAATCGAGTGCAAAGAGAGAT
Microexon-tag Amino Acid seq FEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRD
Transcript ID AT3G53340.5
Gene ID At.16321
Gene Name NFYB10
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >AT3G53340.5
MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKC
QREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPY
GNSQGSNMMVQMPGTE*
CDS seq >AT3G53340.5
ATGGCCGAATCGCAAACCGGTGGTGGTGGTGGTGGAAGCCATGAGAGTGGCGGTGATCAGAGCCCGAGGTCTTTGAATGT
TCGTGAGCAGGACAGGTTTCTTCCGATTGCTAACATAAGCCGTATCATGAAGAGAGGTTTACCTCTAAATGGCAAAATCG
CTAAAGATGCTAAAGAGACTATGCAGGAATGTGTCTCTGAATTCATCAGCTTCGTCACCAGCGAGGCTAGTGATAAGTGC
CAAAGAGAGAAAAGGAAGACCATCAATGGAGATGATTTGCTTTGGGCTATGGCCACTTTAGGATTCGAAGATTACATCGA
TCCCCTCAAGGTTTACCTGATGCGATATAGAGAGATGGAGGGTGACACTAAAGGATCAGGAAAAGGCGGGGAATCGAGTG
CAAAGAGAGATGGTCAACCAAGCCAAGTGTCTCAGTTCTCGCAGGTTCCTCAACAAGGCTCATTCTCACAGGGTCCTTAT
GGAAACTCTCAAGGTTCGAATATGATGGTTCAAATGCCGGGCACAGAGTAG