
Microexon ID | At_3:19775363-19775368:- |
Species | Arabidopsis thaliana | Coordinates | 3:19775363..19775368 |
Microexon Cluster ID | MEP10 |
Size | 6 |
Phase | 0 |
Pfam Domain Motif | DUF4788 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,6,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTTGARGAYTAYATYGADCCMCTYAAGRTKTACCTGRMTAGRTACAGAGAGWTGGAGGGTGAYACYAAGGGATCTGCWARRGSTGGWGATGSATCTGCTAARARRGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTCGAAGATTACATCGATCCCCTCAAGGTTTACCTGATGCGATATAGAGAGATGGAGGGTGACACTAAAGGATCAGGAAAAGGCGGGGAATCGAGTGCAAAGAGAGAT |
Microexon-tag Amino Acid Seq | FEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRD |
Microexon-tag spanning region | 19775176-19775527 |
Microexon-tag prediction score | 0.9385 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT3G53340.1x |
Reference Transcript ID | AT3G53340.1 |
Gene ID | AT3G53340 |
Gene Name | NFYB10 |
Transcript ID | AT3G53340.1 |
Protein ID | AT3G53340.1 |
Gene ID | AT3G53340 |
Gene Name | NFYB10 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >AT3G53340.1 MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKC QREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPY GNSQGSNMMVQMPGTE* |
CDS seq | >AT3G53340.1 ATGGCCGAATCGCAAACCGGTGGTGGTGGTGGTGGAAGCCATGAGAGTGGCGGTGATCAGAGCCCGAGGTCTTTGAATGT TCGTGAGCAGGACAGGTTTCTTCCGATTGCTAACATAAGCCGTATCATGAAGAGAGGTTTACCTCTAAATGGCAAAATCG CTAAAGATGCTAAAGAGACTATGCAGGAATGTGTCTCTGAATTCATCAGCTTCGTCACCAGCGAGGCTAGTGATAAGTGC CAAAGAGAGAAAAGGAAGACCATCAATGGAGATGATTTGCTTTGGGCTATGGCCACTTTAGGATTCGAAGATTACATCGA TCCCCTCAAGGTTTACCTGATGCGATATAGAGAGATGGAGGGTGACACTAAAGGATCAGGAAAAGGCGGGGAATCGAGTG CAAAGAGAGATGGTCAACCAAGCCAAGTGTCTCAGTTCTCGCAGGTTCCTCAACAAGGCTCATTCTCACAGGGTCCTTAT GGAAACTCTCAAGGTTCGAATATGATGGTTCAAATGCCGGGCACAGAGTAG |
Microexon DNA seq | ATGGAG |
Microexon Amino Acid seq | ME |
Microexon-tag DNA Seq | TTCGAAGATTACATCGATCCCCTCAAGGTTTACCTGATGCGATATAGAGAGATGGAGGGTGACACTAAAGGATCAGGAAAAGGCGGGGAATCGAGTGCAAAGAGAGAT |
Microexon-tag Amino Acid seq | FEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRD |
Transcript ID | AT3G53340.5 |
Gene ID | At.16321 |
Gene Name | NFYB10 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >AT3G53340.5 MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKC QREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPY GNSQGSNMMVQMPGTE* |
CDS seq | >AT3G53340.5 ATGGCCGAATCGCAAACCGGTGGTGGTGGTGGTGGAAGCCATGAGAGTGGCGGTGATCAGAGCCCGAGGTCTTTGAATGT TCGTGAGCAGGACAGGTTTCTTCCGATTGCTAACATAAGCCGTATCATGAAGAGAGGTTTACCTCTAAATGGCAAAATCG CTAAAGATGCTAAAGAGACTATGCAGGAATGTGTCTCTGAATTCATCAGCTTCGTCACCAGCGAGGCTAGTGATAAGTGC CAAAGAGAGAAAAGGAAGACCATCAATGGAGATGATTTGCTTTGGGCTATGGCCACTTTAGGATTCGAAGATTACATCGA TCCCCTCAAGGTTTACCTGATGCGATATAGAGAGATGGAGGGTGACACTAAAGGATCAGGAAAAGGCGGGGAATCGAGTG CAAAGAGAGATGGTCAACCAAGCCAAGTGTCTCAGTTCTCGCAGGTTCCTCAACAAGGCTCATTCTCACAGGGTCCTTAT GGAAACTCTCAAGGTTCGAATATGATGGTTCAAATGCCGGGCACAGAGTAG |