
Microexon ID | Ps_NC_039367.1:54301721-54301725:- |
Species | Papaver somniferum | Coordinates | NC_039367.1:54301721..54301725 |
Microexon Cluster ID | MEP09 |
Size | 5 |
Phase | 2 |
Pfam Domain Motif | SKG6 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,34,5,50 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GTDTWYATTCCDGSMMRAGATSAAAATGGAARYTATCSRCCCYTRMMAWCMAGCWCAGGAWTATCARGTGGAGYYATWGSTGGMATAKYTRTAGSAGYAGTAGYWGKR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CACAG |
Microexon Amino Acid seq | STG |
Microexon-tag DNA Seq | GTGTTTATTCCTGGCAAAGATGCAACGGGAAGCTACCCACGCTTGAAACCGAGCACAGGACTTCCTGCTGGAGCCATTGTTGGAATAGCAGTTGGGATAGTAGCTTTT |
Microexon-tag Amino Acid Seq | VFIPGKDATGSYPRLKPSTGLPAGAIVGIAVGIVAF |
Microexon-tag spanning region | 54301569-54302824 |
Microexon-tag prediction score | 0.8854 |
Overlapped with the annotated transcript (%) | 97.3 |
New Transcript ID | XM_026566667.1x |
Reference Transcript ID | XM_026566667.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026566667.1 |
Protein ID | XP_026422452.1 |
Gene ID | LOC113318498 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026422452.1 MVPIGRRRMKRKGEIEFELGLVFLGILFLFSSIGGVECQCRRGCDLALASYEIWAGTNLTFTSQIFNTNDQEILKYNRQV PNKDLIVAGERLNVPFTCDCLEEQRLGHNFTYILKPGGTYEKIVKYYANLTTVGDLTRENKYDNPNNILDGSLVNIIVNC SCGDEKVDDYGLFVTYPLLPGDNLSSIAKQFNISSDLVGRYNLNTDFSSGKGLVFIPGKDATGSYPRLKPSTGGLPAGAI VGIAVGIVAFALLLAVCTYIGLSRRKKAKKALLLSETSEGSRGNFNKSVELASPTALASPRVTGITVDKSVEFTYEELAR ATDDFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEFIDSGN LSEHLRGTEKEPLPWSTRVYIALDSARGLEYIHEHTVPVYIHRDIKSANILVDRNFRGKVADFGLTKLTEVGSGSLQTRV VGTFGYMPPEYAQWGDITPKVDVYAFGVVLYELISAKEAVVRSNGSSVESRGLVSMFEEVLNQPDSNEDLRKLVDPRLGD NYPFDSVRKLAQLAKACTHENPQLRPTMRSIVVALMTLSSSTEDWDVGSFYENHGLVNLMSGR* |
CDS seq | >XM_026566667.1 ATGGTACCTATAGGAAGAAGAAGAATGAAGAGAAAAGGGGAAATTGAGTTTGAACTAGGGTTAGTGTTTCTGGGGATATT GTTCTTATTTTCGAGTATTGGAGGAGTAGAATGCCAGTGCAGAAGGGGATGTGATCTCGCTTTAGCTTCTTATGAAATAT GGGCAGGTACAAACCTTACATTCACTTCACAAATTTTTAATACTAATGACCAGGAGATTCTCAAATACAATCGTCAAGTT CCTAACAAAGATCTTATTGTAGCTGGTGAAAGATTGAATGTCCCTTTTACATGTGATTGCCTTGAGGAACAACGTTTAGG TCATAATTTTACTTATATTCTTAAACCTGGTGGTACTTATGAAAAAATTGTGAAATATTACGCTAATCTTACTACTGTTG GGGATTTGACGAGAGAAAACAAATATGATAATCCTAACAATATACTTGATGGCTCCCTGGTAAATATCATTGTAAATTGC TCTTGTGGAGATGAAAAGGTGGATGATTATGGGTTGTTCGTGACTTATCCTTTACTTCCCGGTGATAACTTGAGTTCTAT TGCTAAGCAATTCAATATCAGTTCTGATTTGGTGGGGAGATACAACCTGAACACGGATTTCAGCAGCGGGAAGGGACTGG TGTTTATTCCTGGCAAAGATGCAACGGGAAGCTACCCACGCTTGAAACCGAGCACAGGAGGACTTCCTGCTGGAGCCATT GTTGGAATAGCAGTTGGGATAGTAGCTTTTGCACTATTATTGGCAGTTTGTACATATATTGGACTTTCTAGAAGGAAAAA GGCAAAGAAGGCATTATTGCTCTCCGAAACATCTGAAGGTTCTCGAGGCAACTTTAATAAATCAGTCGAATTAGCTTCTC CAACCGCCCTTGCTTCGCCTAGGGTTACAGGTATCACGGTGGATAAATCAGTGGAGTTTACGTATGAAGAGCTCGCCAGA GCAACCGATGACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGCTTTGGAGCTGTTTACTACGCTGAGCTTAGAGGCGA GAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAGTTCCTCGCGGAACTGAAAGTTCTTACTCGTGTTCATC ACTTGAATCTGGTGCGCTTGATTGGATATTGTGTCGAGGGTTCTTTGTTCTTAGTGTACGAGTTCATTGACAGTGGAAAC CTAAGTGAACATTTACGTGGAACAGAGAAGGAACCATTGCCGTGGTCCACAAGGGTGTACATTGCTCTCGATTCTGCAAG AGGTCTTGAATACATCCACGAGCACACAGTTCCTGTTTACATTCATCGTGATATCAAATCTGCAAACATTCTGGTAGACA GAAACTTCCGCGGAAAGGTTGCAGATTTTGGGTTAACAAAGCTAACTGAAGTTGGAAGTGGATCCTTGCAAACACGGGTT GTGGGTACATTTGGATACATGCCGCCTGAGTATGCTCAATGGGGTGACATCACCCCCAAGGTTGATGTCTATGCTTTCGG GGTTGTCCTGTATGAACTTATATCAGCAAAAGAAGCCGTGGTTAGGTCAAATGGTTCCAGTGTTGAATCAAGAGGACTCG TCTCTATGTTTGAAGAAGTTCTTAATCAACCCGATTCGAATGAAGATCTTCGCAAACTAGTCGACCCTAGGCTTGGAGAC AACTACCCTTTTGATTCAGTCCGCAAGTTAGCTCAACTTGCAAAAGCTTGCACGCACGAGAATCCCCAATTGAGACCTAC CATGAGGTCAATTGTGGTCGCATTAATGACACTTTCATCATCAACAGAGGATTGGGATGTTGGCTCCTTCTACGAAAACC ACGGTCTAGTGAATCTAATGTCAGGAAGGTAA |
Microexon DNA seq | CACAG |
Microexon Amino Acid seq | STG |
Microexon-tag DNA Seq | GTGTTTATTCCTGGCAAAGATGCAACGGGAAGCTACCCACGCTTGAAACCGAGCACAGGAGGACTTCCTGCTGGAGCCATTGTTGGAATAGCAGTTGGGATAGTAGCT |
Microexon-tag Amino Acid seq | VFIPGKDATGSYPRLKPSTGGLPAGAIVGIAVGIVA |
Transcript ID | XM_026566667.1 |
Gene ID | Ps.60903 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026566667.1 MVPIGRRRMKRKGEIEFELGLVFLGILFLFSSIGGVECQCRRGCDLALASYEIWAGTNLTFTSQIFNTNDQEILKYNRQV PNKDLIVAGERLNVPFTCDCLEEQRLGHNFTYILKPGGTYEKIVKYYANLTTVGDLTRENKYDNPNNILDGSLVNIIVNC SCGDEKVDDYGLFVTYPLLPGDNLSSIAKQFNISSDLVGRYNLNTDFSSGKGLVFIPGKDATGSYPRLKPSTGGLPAGAI VGIAVGIVAFALLLAVCTYIGLSRRKKAKKALLLSETSEGSRGNFNKSVELASPTALASPRVTGITVDKSVEFTYEELAR ATDDFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEFIDSGN LSEHLRGTEKEPLPWSTRVYIALDSARGLEYIHEHTVPVYIHRDIKSANILVDRNFRGKVADFGLTKLTEVGSGSLQTRV VGTFGYMPPEYAQWGDITPKVDVYAFGVVLYELISAKEAVVRSNGSSVESRGLVSMFEEVLNQPDSNEDLRKLVDPRLGD NYPFDSVRKLAQLAKACTHENPQLRPTMRSIVVALMTLSSSTEDWDVGSFYENHGLVNLMSGR* |
CDS seq | >XM_026566667.1 ATGGTACCTATAGGAAGAAGAAGAATGAAGAGAAAAGGGGAAATTGAGTTTGAACTAGGGTTAGTGTTTCTGGGGATATT GTTCTTATTTTCGAGTATTGGAGGAGTAGAATGCCAGTGCAGAAGGGGATGTGATCTCGCTTTAGCTTCTTATGAAATAT GGGCAGGTACAAACCTTACATTCACTTCACAAATTTTTAATACTAATGACCAGGAGATTCTCAAATACAATCGTCAAGTT CCTAACAAAGATCTTATTGTAGCTGGTGAAAGATTGAATGTCCCTTTTACATGTGATTGCCTTGAGGAACAACGTTTAGG TCATAATTTTACTTATATTCTTAAACCTGGTGGTACTTATGAAAAAATTGTGAAATATTACGCTAATCTTACTACTGTTG GGGATTTGACGAGAGAAAACAAATATGATAATCCTAACAATATACTTGATGGCTCCCTGGTAAATATCATTGTAAATTGC TCTTGTGGAGATGAAAAGGTGGATGATTATGGGTTGTTCGTGACTTATCCTTTACTTCCCGGTGATAACTTGAGTTCTAT TGCTAAGCAATTCAATATCAGTTCTGATTTGGTGGGGAGATACAACCTGAACACGGATTTCAGCAGCGGGAAGGGACTGG TGTTTATTCCTGGCAAAGATGCAACGGGAAGCTACCCACGCTTGAAACCGAGCACAGGAGGACTTCCTGCTGGAGCCATT GTTGGAATAGCAGTTGGGATAGTAGCTTTTGCACTATTATTGGCAGTTTGTACATATATTGGACTTTCTAGAAGGAAAAA GGCAAAGAAGGCATTATTGCTCTCCGAAACATCTGAAGGTTCTCGAGGCAACTTTAATAAATCAGTCGAATTAGCTTCTC CAACCGCCCTTGCTTCGCCTAGGGTTACAGGTATCACGGTGGATAAATCAGTGGAGTTTACGTATGAAGAGCTCGCCAGA GCAACCGATGACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGCTTTGGAGCTGTTTACTACGCTGAGCTTAGAGGCGA GAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAGTTCCTCGCGGAACTGAAAGTTCTTACTCGTGTTCATC ACTTGAATCTGGTGCGCTTGATTGGATATTGTGTCGAGGGTTCTTTGTTCTTAGTGTACGAGTTCATTGACAGTGGAAAC CTAAGTGAACATTTACGTGGAACAGAGAAGGAACCATTGCCGTGGTCCACAAGGGTGTACATTGCTCTCGATTCTGCAAG AGGTCTTGAATACATCCACGAGCACACAGTTCCTGTTTACATTCATCGTGATATCAAATCTGCAAACATTCTGGTAGACA GAAACTTCCGCGGAAAGGTTGCAGATTTTGGGTTAACAAAGCTAACTGAAGTTGGAAGTGGATCCTTGCAAACACGGGTT GTGGGTACATTTGGATACATGCCGCCTGAGTATGCTCAATGGGGTGACATCACCCCCAAGGTTGATGTCTATGCTTTCGG GGTTGTCCTGTATGAACTTATATCAGCAAAAGAAGCCGTGGTTAGGTCAAATGGTTCCAGTGTTGAATCAAGAGGACTCG TCTCTATGTTTGAAGAAGTTCTTAATCAACCCGATTCGAATGAAGATCTTCGCAAACTAGTCGACCCTAGGCTTGGAGAC AACTACCCTTTTGATTCAGTCCGCAAGTTAGCTCAACTTGCAAAAGCTTGCACGCACGAGAATCCCCAATTGAGACCTAC CATGAGGTCAATTGTGGTCGCATTAATGACACTTTCATCATCAACAGAGGATTGGGATGTTGGCTCCTTCTACGAAAACC ACGGTCTAGTGAATCTAATGTCAGGAAGGTAA |