
Microexon ID | Ps_NC_039359.1:100599479-100599483:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:100599479..100599483 |
Microexon Cluster ID | MEP09 |
Size | 5 |
Phase | 2 |
Pfam Domain Motif | SKG6 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,34,5,50 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GTDTWYATTCCDGSMMRAGATSAAAATGGAARYTATCSRCCCYTRMMAWCMAGCWCAGGAWTATCARGTGGAGYYATWGSTGGMATAKYTRTAGSAGYAGTAGYWGKR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CACAG |
Microexon Amino Acid seq | STG |
Microexon-tag DNA Seq | GTGTTTTTTCCTGGCAAAGATGAAACGGGAAACTACCCACGCTTGAAAGCGAGCACAGGACTTCCCACTGGAGCCATTGTTGGAATAGCAGTTGGAATAGTAGCTTTT |
Microexon-tag Amino Acid Seq | VFFPGKDETGNYPRLKASTGLPTGAIVGIAVGIVAF |
Microexon-tag spanning region | 100599338-100600993 |
Microexon-tag prediction score | 0.8734 |
Overlapped with the annotated transcript (%) | 97.3 |
New Transcript ID | XM_026592397.1x |
Reference Transcript ID | XM_026592397.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026592396.1 |
Protein ID | XP_026448181.1 |
Gene ID | LOC113348570 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026448181.1 MVPIGRRRIIKSKGEIQFKLGFVFWGILFLFSSIGEVECQCRRGCDLALAYYDIWAGTNLTFTSKIFSTSDQEILKYNPQ VPNKDLILADDILNVPFRCDCIQEQRLGHNFTYTLQPGDTYEKIVKYYSNLTTKEDLSRDNPSYNPNNILDGSLVNVIVN CSCGDEKVDDYGLFVTYPLLPGDNLSSIAKKFNISSDLLRSYNPKTDFSSGKGVVFFPGKDETGNYPRLKASTAGGLPTG AIVGIAVGIVAFALLLAVCTYIVLSKKKKAKKALLLFETSEGSRGNFNKSVELASPTALASPRVTGITVDKSVEFTYEEL ARATDDFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEFIDS GNLSEHLRGTEKEPLPWSTRVHIALDSARGLEYIHEHTVPVYIHRDIKSANILVDRNFRGKVADFGLTKLTEVGSGSLQT RVVGTFGYMPPEYAQWGDITPKVDVYAFGVVLYELISAKEAVVRSNGSSVESRGLVSMFEEVLNQPESNEDLRKLVDPRL GDNYPFDSIRKVAQLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENHGLVNLMSGR* |
CDS seq | >XM_026592396.1 ATGGTACCTATAGGAAGAAGAAGAATAATAAAGAGTAAAGGGGAGATTCAGTTTAAACTAGGGTTTGTGTTTTGGGGGAT TTTGTTTTTGTTCTCGAGTATTGGAGAAGTAGAATGCCAGTGCAGAAGGGGATGTGATCTCGCTTTAGCTTATTATGATA TATGGGCAGGTACAAACCTTACATTCACTTCGAAAATTTTTAGTACTAGTGACCAGGAGATTCTCAAGTACAATCCTCAA GTTCCTAACAAAGATCTCATTTTAGCTGATGACATATTGAATGTCCCTTTTAGATGTGATTGCATTCAGGAACAACGATT AGGTCACAATTTTACTTATACTCTCCAACCTGGTGATACTTATGAAAAAATCGTTAAATATTACTCTAATCTTACTACCA AAGAAGACTTGAGTAGAGATAACCCCTCTTATAATCCTAACAATATACTTGATGGCTCCCTGGTAAATGTCATTGTAAAT TGCTCTTGTGGAGATGAAAAGGTGGATGATTATGGGTTGTTCGTGACTTATCCTTTACTTCCTGGTGATAACTTGAGTTC TATTGCTAAGAAATTCAATATCAGTTCTGATTTGCTACGGAGTTACAACCCGAAAACGGATTTCAGCAGCGGGAAGGGTG TGGTGTTTTTTCCTGGCAAAGATGAAACGGGAAACTACCCACGCTTGAAAGCGAGCACAGCAGGAGGACTTCCCACTGGA GCCATTGTTGGAATAGCAGTTGGAATAGTAGCTTTTGCACTATTATTGGCAGTTTGTACATATATTGTACTTTCTAAAAA GAAAAAGGCGAAGAAGGCATTATTGCTCTTCGAAACATCTGAAGGTTCTCGAGGCAATTTTAATAAATCAGTCGAATTAG CTTCTCCAACCGCCCTTGCTTCACCTAGGGTAACAGGTATCACGGTGGATAAATCAGTCGAGTTTACATATGAAGAGCTC GCCAGGGCGACCGATGACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGAGCTGTTTACTATGCTGAGCTTAG AGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAGTTCCTCGCTGAACTGAAAGTTCTTACTCGGG TTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGTGTCGAGGGTTCTTTGTTTTTAGTGTACGAGTTCATTGACAGT GGAAACCTAAGTGAACATTTACGTGGAACAGAGAAGGAACCATTGCCGTGGTCCACAAGGGTGCACATTGCTCTCGATTC TGCAAGAGGTCTTGAATACATCCACGAGCACACAGTTCCTGTTTACATTCATCGTGATATCAAATCTGCAAACATTCTGG TAGACAGGAACTTCCGCGGAAAGGTTGCAGATTTTGGGTTAACAAAGCTAACTGAAGTTGGAAGTGGATCCTTGCAAACA CGGGTTGTGGGTACATTTGGATACATGCCGCCTGAGTATGCTCAGTGGGGTGATATTACCCCCAAGGTTGATGTCTATGC TTTCGGGGTTGTCCTGTATGAACTTATATCAGCAAAAGAAGCTGTGGTTAGATCAAATGGTTCCAGTGTTGAATCAAGAG GACTCGTCTCTATGTTTGAAGAAGTTCTTAATCAGCCCGAGTCAAATGAAGATCTTCGCAAACTAGTCGACCCTAGGCTT GGAGACAACTACCCTTTTGATTCAATCCGTAAGGTGGCTCAACTTGCAAAAGCTTGCACGCAAGAGAACCCTCAATTGAG ACCTAGCATGAGGTCAATTGTGGTCGCATTAATGACACTTTCATCATCAACTGAAGATTGGGATGTTGGCTCCTTCTATG AAAACCACGGTCTAGTGAATCTAATGTCAGGAAGGTAA |
Microexon DNA seq | CACAG |
Microexon Amino Acid seq | STA |
Microexon-tag DNA Seq | GTGTTTTTTCCTGGCAAAGATGAAACGGGAAACTACCCACGCTTGAAAGCGAGCACAGCAGGAGGACTTCCCACTGGAGCCATTGTTGGAATAGCAGTTGGAATAGTA |
Microexon-tag Amino Acid seq | VFFPGKDETGNYPRLKASTAGGLPTGAIVGIAVGIV |
Transcript ID | XM_026592396.1 |
Gene ID | Ps.11643 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026592396.1 MVPIGRRRIIKSKGEIQFKLGFVFWGILFLFSSIGEVECQCRRGCDLALAYYDIWAGTNLTFTSKIFSTSDQEILKYNPQ VPNKDLILADDILNVPFRCDCIQEQRLGHNFTYTLQPGDTYEKIVKYYSNLTTKEDLSRDNPSYNPNNILDGSLVNVIVN CSCGDEKVDDYGLFVTYPLLPGDNLSSIAKKFNISSDLLRSYNPKTDFSSGKGVVFFPGKDETGNYPRLKASTAGGLPTG AIVGIAVGIVAFALLLAVCTYIVLSKKKKAKKALLLFETSEGSRGNFNKSVELASPTALASPRVTGITVDKSVEFTYEEL ARATDDFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEFIDS GNLSEHLRGTEKEPLPWSTRVHIALDSARGLEYIHEHTVPVYIHRDIKSANILVDRNFRGKVADFGLTKLTEVGSGSLQT RVVGTFGYMPPEYAQWGDITPKVDVYAFGVVLYELISAKEAVVRSNGSSVESRGLVSMFEEVLNQPESNEDLRKLVDPRL GDNYPFDSIRKVAQLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENHGLVNLMSGR* |
CDS seq | >XM_026592396.1 ATGGTACCTATAGGAAGAAGAAGAATAATAAAGAGTAAAGGGGAGATTCAGTTTAAACTAGGGTTTGTGTTTTGGGGGAT TTTGTTTTTGTTCTCGAGTATTGGAGAAGTAGAATGCCAGTGCAGAAGGGGATGTGATCTCGCTTTAGCTTATTATGATA TATGGGCAGGTACAAACCTTACATTCACTTCGAAAATTTTTAGTACTAGTGACCAGGAGATTCTCAAGTACAATCCTCAA GTTCCTAACAAAGATCTCATTTTAGCTGATGACATATTGAATGTCCCTTTTAGATGTGATTGCATTCAGGAACAACGATT AGGTCACAATTTTACTTATACTCTCCAACCTGGTGATACTTATGAAAAAATCGTTAAATATTACTCTAATCTTACTACCA AAGAAGACTTGAGTAGAGATAACCCCTCTTATAATCCTAACAATATACTTGATGGCTCCCTGGTAAATGTCATTGTAAAT TGCTCTTGTGGAGATGAAAAGGTGGATGATTATGGGTTGTTCGTGACTTATCCTTTACTTCCTGGTGATAACTTGAGTTC TATTGCTAAGAAATTCAATATCAGTTCTGATTTGCTACGGAGTTACAACCCGAAAACGGATTTCAGCAGCGGGAAGGGTG TGGTGTTTTTTCCTGGCAAAGATGAAACGGGAAACTACCCACGCTTGAAAGCGAGCACAGCAGGAGGACTTCCCACTGGA GCCATTGTTGGAATAGCAGTTGGAATAGTAGCTTTTGCACTATTATTGGCAGTTTGTACATATATTGTACTTTCTAAAAA GAAAAAGGCGAAGAAGGCATTATTGCTCTTCGAAACATCTGAAGGTTCTCGAGGCAATTTTAATAAATCAGTCGAATTAG CTTCTCCAACCGCCCTTGCTTCACCTAGGGTAACAGGTATCACGGTGGATAAATCAGTCGAGTTTACATATGAAGAGCTC GCCAGGGCGACCGATGACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGAGCTGTTTACTATGCTGAGCTTAG AGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAGTTCCTCGCTGAACTGAAAGTTCTTACTCGGG TTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGTGTCGAGGGTTCTTTGTTTTTAGTGTACGAGTTCATTGACAGT GGAAACCTAAGTGAACATTTACGTGGAACAGAGAAGGAACCATTGCCGTGGTCCACAAGGGTGCACATTGCTCTCGATTC TGCAAGAGGTCTTGAATACATCCACGAGCACACAGTTCCTGTTTACATTCATCGTGATATCAAATCTGCAAACATTCTGG TAGACAGGAACTTCCGCGGAAAGGTTGCAGATTTTGGGTTAACAAAGCTAACTGAAGTTGGAAGTGGATCCTTGCAAACA CGGGTTGTGGGTACATTTGGATACATGCCGCCTGAGTATGCTCAGTGGGGTGATATTACCCCCAAGGTTGATGTCTATGC TTTCGGGGTTGTCCTGTATGAACTTATATCAGCAAAAGAAGCTGTGGTTAGATCAAATGGTTCCAGTGTTGAATCAAGAG GACTCGTCTCTATGTTTGAAGAAGTTCTTAATCAGCCCGAGTCAAATGAAGATCTTCGCAAACTAGTCGACCCTAGGCTT GGAGACAACTACCCTTTTGATTCAATCCGTAAGGTGGCTCAACTTGCAAAAGCTTGCACGCAAGAGAACCCTCAATTGAG ACCTAGCATGAGGTCAATTGTGGTCGCATTAATGACACTTTCATCATCAACTGAAGATTGGGATGTTGGCTCCTTCTATG AAAACCACGGTCTAGTGAATCTAATGTCAGGAAGGTAA |