
Microexon ID | Ps_NC_039358.1:145506860-145506864:- |
Species | Papaver somniferum | Coordinates | NC_039358.1:145506860..145506864 |
Microexon Cluster ID | MEP09 |
Size | 5 |
Phase | 2 |
Pfam Domain Motif | SKG6 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,34,5,50 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GTDTWYATTCCDGSMMRAGATSAAAATGGAARYTATCSRCCCYTRMMAWCMAGCWCAGGAWTATCARGTGGAGYYATWGSTGGMATAKYTRTAGSAGYAGTAGYWGKR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CAGAG |
Microexon Amino Acid seq | SRG |
Microexon-tag DNA Seq | GTGTTCGTACCTGCAAAAGATCAAACAGGGGATTTTCCACGCCTGAAGTCGAGCAGAGGAATCTCCAGAGGCGCAATTGCAGGCACGTCAGTTGCAGTAGTAGCTGTT |
Microexon-tag Amino Acid Seq | VFVPAKDQTGDFPRLKSSRGISRGAIAGTSVAVVAV |
Microexon-tag spanning region | 145506705-145507136 |
Microexon-tag prediction score | 0.8821 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026552528.1x |
Reference Transcript ID | XM_026552528.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026552528.1 |
Protein ID | XP_026408313.1 |
Gene ID | LOC113303479 |
Gene Name | NA |
Pfam domain motif | VSP |
Motif E-value | 0.078 |
Motif start | 221 |
Motif end | 250 |
Protein seq | >XP_026408313.1 MFFCSSKRRKLELGIVILFFLCFRVKAKCSPGCDLAMASYFLVEGSNLTYISDIFGKNIPEILAYDPDVKDQNTIQFGTR VNVPFSCDCLNDDFLGHTFDYTTQTGDTYKIIAQKIFAELTTADWIQRINHLNPNLVLPYTSINVTVNCSCGDESVSKDY GLFMTYPLHPEDNLSFVASESGVPKKLLQMYNPGMDFSQGSGLVFVPAKDQTGDFPRLKSSRGISRGAIAGTSVAVVAVA VLLMAVCSYFGLSRRKKVNRLSLLPKLCTDSPTPSGLVGMVRSTPLGKHTESIGHVGGASPGLSGISMDKSVEFSYEELA KATNNFSSSKLIGQGGFGTVYYGMLRGEKAAIKKMDMQASKEFLAELNVLTHVHHLNLVHLIGYCVEGSLFLVYEYIENG NLSEHLHGSGWESLPWTTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDRNFHGKVADFGLTKLTEVGNSSLQTR LVGTFGYISPEYAQYGDISPKVDVYAFGVVIFELISAKEAVVKANGCIAESRGLVDLFEDVLNQIDPKGDLANLVDPKLG KDYPLDSVLKMAQLAKACAQENPQLRPSMRSIVVALTTLSSSSDNWDVGSFYENQALVNLVTGR* |
CDS seq | >XM_026552528.1 ATGTTTTTCTGTTCAAGTAAAAGAAGAAAACTAGAGTTGGGTATAGTGATTCTTTTCTTCTTATGTTTTCGAGTTAAAGC TAAGTGTAGTCCAGGTTGTGATCTTGCTATGGCATCTTATTTCTTAGTAGAAGGATCAAACTTGACTTATATCAGTGATA TATTCGGCAAAAACATTCCGGAAATCCTTGCTTATGATCCGGATGTTAAAGATCAAAACACTATTCAGTTTGGAACAAGA GTGAACGTTCCATTCTCATGTGATTGTCTTAATGATGATTTTTTAGGACATACTTTCGATTATACAACGCAAACTGGAGA TACATATAAGATAATTGCTCAAAAGATTTTCGCAGAACTCACAACGGCAGATTGGATACAAAGAATAAATCATTTGAATC CTAATTTAGTGCTACCTTATACATCCATCAATGTAACAGTGAATTGCTCGTGTGGTGATGAAAGTGTATCAAAGGATTAT GGGTTATTTATGACTTACCCACTTCATCCTGAAGATAATTTATCTTTCGTAGCGTCTGAATCTGGTGTACCCAAAAAATT GCTACAGATGTATAACCCAGGAATGGATTTCAGCCAAGGGAGTGGATTGGTGTTCGTACCTGCAAAAGATCAAACAGGGG ATTTTCCACGCCTGAAGTCGAGCAGAGGAATCTCCAGAGGCGCAATTGCAGGCACGTCAGTTGCAGTAGTAGCTGTTGCA GTGTTATTAATGGCAGTCTGTTCATACTTTGGGCTCTCCAGAAGGAAGAAGGTCAACAGGTTGTCATTACTTCCAAAATT GTGCACAGATTCCCCTACCCCATCTGGTCTAGTAGGTATGGTAAGAAGTACTCCCTTGGGTAAACATACGGAATCAATCG GGCATGTTGGTGGAGCTTCCCCAGGACTTAGCGGTATCTCTATGGACAAATCTGTGGAATTCTCATATGAAGAACTTGCT AAGGCGACAAATAATTTTAGTAGTAGCAAGTTAATTGGTCAAGGAGGGTTTGGAACAGTTTACTATGGTATGCTAAGAGG AGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCGAAAGAGTTTCTTGCTGAACTGAATGTTCTAACACATGTTC ATCACTTGAACCTGGTACACTTAATTGGATATTGTGTTGAAGGTTCTTTGTTCCTTGTTTACGAGTATATTGAGAACGGG AACTTAAGCGAACACTTACATGGCTCGGGGTGGGAATCGCTACCATGGACCACAAGGGTGCAAATTGCACTTGATTCAGC AAGAGGTCTTGAATATATCCATGAACATACAGTTCCAGTGTACATCCATCGTGATATTAAATCAGCAAACATTTTGATAG ACAGAAACTTCCATGGAAAGGTAGCTGATTTTGGTTTAACTAAACTGACTGAAGTCGGAAATTCATCCTTGCAAACACGT CTAGTTGGTACATTCGGATATATTTCACCCGAGTATGCTCAGTATGGTGATATATCCCCTAAGGTTGATGTATATGCTTT TGGAGTAGTTATTTTTGAACTTATTTCCGCGAAGGAAGCTGTAGTTAAAGCAAATGGATGTATTGCTGAATCAAGGGGAC TTGTTGATTTGTTTGAGGATGTTCTTAATCAAATTGACCCGAAAGGTGATCTTGCCAATCTAGTCGACCCTAAACTTGGG AAGGATTATCCACTTGATTCAGTTCTTAAGATGGCACAGCTTGCCAAAGCTTGTGCACAAGAGAATCCACAACTAAGACC AAGTATGCGATCTATAGTGGTTGCATTAACCACACTCTCATCGTCATCTGACAATTGGGATGTCGGATCCTTCTACGAAA ATCAAGCTCTAGTTAACCTAGTGACAGGAAGGTAG |
Microexon DNA seq | CAGAG |
Microexon Amino Acid seq | SRG |
Microexon-tag DNA Seq | GTGTTCGTACCTGCAAAAGATCAAACAGGGGATTTTCCACGCCTGAAGTCGAGCAGAGGAATCTCCAGAGGCGCAATTGCAGGCACGTCAGTTGCAGTAGTAGCTGTT |
Microexon-tag Amino Acid seq | VFVPAKDQTGDFPRLKSSRGISRGAIAGTSVAVVAV |
Transcript ID | Ps.4534.1 |
Gene ID | Ps.4534 |
Gene Name | NA |
Pfam domain motif | VSP |
Motif E-value | 0.078 |
Motif start | 221 |
Motif end | 250 |
Protein seq | >Ps.4534.1 MFFCSSKRRKLELGIVILFFLCFRVKAKCSPGCDLAMASYFLVEGSNLTYISDIFGKNIPEILAYDPDVKDQNTIQFGTR VNVPFSCDCLNDDFLGHTFDYTTQTGDTYKIIAQKIFAELTTADWIQRINHLNPNLVLPYTSINVTVNCSCGDESVSKDY GLFMTYPLHPEDNLSFVASESGVPKKLLQMYNPGMDFSQGSGLVFVPAKDQTGDFPRLKSSRGISRGAIAGTSVAVVAVA VLLMAVCSYFGLSRRKKVNRLSLLPKLCTDSPTPSGLGMVRSTPLGKHTESIGHVGGASPGLSGISMDKSVEFSYEELAK ATNNFSSSKLIGQGGFGTVYYGMLRGEKAAIKKMDMQASKEFLAELNVLTHVHHLNLVHLIGYCVEGSLFLVYEYIENGN LSEHLHGSGWESLPWTTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDRNFHGKVADFGLTKLTEVGNSSLQTRL VGTFGYISPEYAQYGDISPKVDVYAFGVVIFELISAKEAVVKANGCIAESRGLVDLFEDVLNQIDPKGDLANLVDPKLGK DYPLDSVLKMAQLAKACAQENPQLRPSMRSIVVALTTLSSSSDNWDVGSFYENQALVNLVTGR* |
CDS seq | >Ps.4534.1 ATGTTTTTCTGTTCAAGTAAAAGAAGAAAACTAGAGTTGGGTATAGTGATTCTTTTCTTCTTATGTTTTCGAGTTAAAGC TAAGTGTAGTCCAGGTTGTGATCTTGCTATGGCATCTTATTTCTTAGTAGAAGGATCAAACTTGACTTATATCAGTGATA TATTCGGCAAAAACATTCCGGAAATCCTTGCTTATGATCCGGATGTTAAAGATCAAAACACTATTCAGTTTGGAACAAGA GTGAACGTTCCATTCTCATGTGATTGTCTTAATGATGATTTTTTAGGACATACTTTCGATTATACAACGCAAACTGGAGA TACATATAAGATAATTGCTCAAAAGATTTTCGCAGAACTCACAACGGCAGATTGGATACAAAGAATAAATCATTTGAATC CTAATTTAGTGCTACCTTATACATCCATCAATGTAACAGTGAATTGCTCGTGTGGTGATGAAAGTGTATCAAAGGATTAT GGGTTATTTATGACTTACCCACTTCATCCTGAAGATAATTTATCTTTCGTAGCGTCTGAATCTGGTGTACCCAAAAAATT GCTACAGATGTATAACCCAGGAATGGATTTCAGCCAAGGGAGTGGATTGGTGTTCGTACCTGCAAAAGATCAAACAGGGG ATTTTCCACGCCTGAAGTCGAGCAGAGGAATCTCCAGAGGCGCAATTGCAGGCACGTCAGTTGCAGTAGTAGCTGTTGCA GTGTTATTAATGGCAGTCTGTTCATACTTTGGGCTCTCCAGAAGGAAGAAGGTCAACAGGTTGTCATTACTTCCAAAATT GTGCACAGATTCCCCTACCCCATCTGGTCTAGGTATGGTAAGAAGTACTCCCTTGGGTAAACATACGGAATCAATCGGGC ATGTTGGTGGAGCTTCCCCAGGACTTAGCGGTATCTCTATGGACAAATCTGTGGAATTCTCATATGAAGAACTTGCTAAG GCGACAAATAATTTTAGTAGTAGCAAGTTAATTGGTCAAGGAGGGTTTGGAACAGTTTACTATGGTATGCTAAGAGGAGA GAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCGAAAGAGTTTCTTGCTGAACTGAATGTTCTAACACATGTTCATC ACTTGAACCTGGTACACTTAATTGGATATTGTGTTGAAGGTTCTTTGTTCCTTGTTTACGAGTATATTGAGAACGGGAAC TTAAGCGAACACTTACATGGCTCGGGGTGGGAATCGCTACCATGGACCACAAGGGTGCAAATTGCACTTGATTCAGCAAG AGGTCTTGAATATATCCATGAACATACAGTTCCAGTGTACATCCATCGTGATATTAAATCAGCAAACATTTTGATAGACA GAAACTTCCATGGAAAGGTAGCTGATTTTGGTTTAACTAAACTGACTGAAGTCGGAAATTCATCCTTGCAAACACGTCTA GTTGGTACATTCGGATATATTTCACCCGAGTATGCTCAGTATGGTGATATATCCCCTAAGGTTGATGTATATGCTTTTGG AGTAGTTATTTTTGAACTTATTTCCGCGAAGGAAGCTGTAGTTAAAGCAAATGGATGTATTGCTGAATCAAGGGGACTTG TTGATTTGTTTGAGGATGTTCTTAATCAAATTGACCCGAAAGGTGATCTTGCCAATCTAGTCGACCCTAAACTTGGGAAG GATTATCCACTTGATTCAGTTCTTAAGATGGCACAGCTTGCCAAAGCTTGTGCACAAGAGAATCCACAACTAAGACCAAG TATGCGATCTATAGTGGTTGCATTAACCACACTCTCATCGTCATCTGACAATTGGGATGTCGGATCCTTCTACGAAAATC AAGCTCTAGTTAACCTAGTGACAGGAAGGTAG |