Microexon ID Ta_4B:54348789-54348793:-
Species Triticum   Aestivum
Coordinates 4B:54348789..54348793
Microexon Cluster ID MEP08
Size 5
Phase 1
Pfam Domain Motif Peptidase_C1
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,5,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCAA
Microexon Amino Acid seq DQ
Microexon-tag DNA Seq TTCGACGCCAGATCTAAATGGTCTGGCTGCAGCACGATCGGGAAAATACTTGATCAAGGTCACTGTGGTGCGTGTTGGGCCTTTGGTGCTGTGGAGTGCCTGCAAGAT
Microexon-tag Amino Acid Seq FDARSKWSGCSTIGKILDQGHCGACWAFGAVECLQD
Microexon-tag spanning region54348641-54348972
Microexon-tag prediction score0.9465
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4B02G062600.1x
Reference Transcript ID TraesCS4B02G062600.1
Gene ID TraesCS4B02G062600
Gene Name NA
Transcript ID TraesCS4B02G062600.1
Protein ID
Gene ID TraesCS4B02G062600
Gene Name
Pfam domain motif Peptidase_C1
Motif E-value 9.50E-61
Motif start 112
Motif end 345
Protein seq >TraesCS4B02G062600.1
MGRLLPLALLVLLSAAAAAPQLVGAARGDHSLPIIQLAGAAKAEHSLGIIQKDIIQTVNKHPNAGWTAGHNPYLANYTIE
QFKHILGVKPTPPGLLAGVPTKTYSTSEKEDLPKEFDARSKWSGCSTIGKILDQGHCGACWAFGAVECLQDRFCIHHGVN
VSLSVNDIVACCGFLCGDGCEGGYPIFAWQYFVENGVVTDECDPFFDQVGCQHPGCEPAYPTPVCEKKCKVQNQVWEEKK
HFSIDAYQVNSDPHDIMAEVYKNGPVEVSFIIYEDFAHYKSGVYKQITGRMVGGHAAKLIGWGTSDAGEDYWLLANQWNR
GWGDDGYFKVIRGTNECGIEGDVNAGMPSTKNIAGSAFAM*
CDS seq >TraesCS4B02G062600.1
ATGGGGAGGCTACTCCCGCTGGCGCTGCTCGTCCTCCTCTCTGCCGCCGCCGCTGCCCCCCAGCTCGTCGGAGCTGCGAG
GGGAGACCATTCCCTACCAATAATACAGCTAGCGGGAGCAGCCAAGGCAGAGCATTCCCTAGGAATCATCCAGAAGGACA
TCATTCAGACGGTCAACAAGCATCCCAATGCCGGGTGGACGGCTGGACACAATCCCTACCTCGCAAACTATACTATTGAG
CAATTTAAGCATATCCTGGGAGTGAAGCCAACGCCTCCAGGTTTACTGGCTGGTGTTCCAACCAAAACTTATTCTACATC
AGAAAAGGAGGATCTCCCAAAGGAGTTCGACGCCAGATCTAAATGGTCTGGCTGCAGCACGATCGGGAAAATACTTGATC
AAGGTCACTGTGGTGCGTGTTGGGCCTTTGGTGCTGTGGAGTGCCTGCAAGATCGTTTCTGCATTCATCACGGCGTGAAC
GTTTCACTTTCTGTCAATGACATAGTGGCTTGCTGTGGGTTTCTGTGTGGCGATGGTTGTGAGGGAGGATATCCTATCTT
CGCATGGCAATACTTCGTCGAGAACGGTGTTGTTACTGACGAGTGCGATCCATTCTTTGATCAGGTTGGCTGCCAGCATC
CTGGATGCGAACCTGCTTATCCTACACCTGTGTGTGAAAAGAAATGCAAGGTTCAGAACCAAGTTTGGGAGGAAAAGAAA
CATTTCAGCATCGATGCATACCAAGTAAACTCTGATCCACATGACATCATGGCAGAGGTCTACAAGAATGGCCCTGTAGA
AGTTTCTTTCATAATTTATGAGGACTTTGCACACTACAAGTCAGGTGTTTACAAGCAAATCACAGGTAGGATGGTGGGAG
GTCATGCCGCCAAATTGATTGGATGGGGAACAAGTGATGCTGGCGAGGATTACTGGCTTCTTGCAAATCAGTGGAACAGA
GGATGGGGCGATGATGGGTACTTCAAGGTCATAAGGGGCACGAATGAATGTGGCATTGAAGGAGATGTTAATGCCGGTAT
GCCCTCGACAAAGAACATCGCGGGTAGCGCCTTTGCAATGTGA
Ta_4B:54348789-54348793:- does not have available information here.