
Microexon ID | Ta_4B:54348789-54348793:- |
Species | Triticum Aestivum | Coordinates | 4B:54348789..54348793 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAA |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTCGACGCCAGATCTAAATGGTCTGGCTGCAGCACGATCGGGAAAATACTTGATCAAGGTCACTGTGGTGCGTGTTGGGCCTTTGGTGCTGTGGAGTGCCTGCAAGAT |
Microexon-tag Amino Acid Seq | FDARSKWSGCSTIGKILDQGHCGACWAFGAVECLQD |
Microexon-tag spanning region | 54348641-54348972 |
Microexon-tag prediction score | 0.9465 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G062600.1x |
Reference Transcript ID | TraesCS4B02G062600.1 |
Gene ID | TraesCS4B02G062600 |
Gene Name | NA |
Transcript ID | TraesCS4B02G062600.1 |
Protein ID | |
Gene ID | TraesCS4B02G062600 |
Gene Name | |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 9.50E-61 |
Motif start | 112 |
Motif end | 345 |
Protein seq | >TraesCS4B02G062600.1 MGRLLPLALLVLLSAAAAAPQLVGAARGDHSLPIIQLAGAAKAEHSLGIIQKDIIQTVNKHPNAGWTAGHNPYLANYTIE QFKHILGVKPTPPGLLAGVPTKTYSTSEKEDLPKEFDARSKWSGCSTIGKILDQGHCGACWAFGAVECLQDRFCIHHGVN VSLSVNDIVACCGFLCGDGCEGGYPIFAWQYFVENGVVTDECDPFFDQVGCQHPGCEPAYPTPVCEKKCKVQNQVWEEKK HFSIDAYQVNSDPHDIMAEVYKNGPVEVSFIIYEDFAHYKSGVYKQITGRMVGGHAAKLIGWGTSDAGEDYWLLANQWNR GWGDDGYFKVIRGTNECGIEGDVNAGMPSTKNIAGSAFAM* |
CDS seq | >TraesCS4B02G062600.1 ATGGGGAGGCTACTCCCGCTGGCGCTGCTCGTCCTCCTCTCTGCCGCCGCCGCTGCCCCCCAGCTCGTCGGAGCTGCGAG GGGAGACCATTCCCTACCAATAATACAGCTAGCGGGAGCAGCCAAGGCAGAGCATTCCCTAGGAATCATCCAGAAGGACA TCATTCAGACGGTCAACAAGCATCCCAATGCCGGGTGGACGGCTGGACACAATCCCTACCTCGCAAACTATACTATTGAG CAATTTAAGCATATCCTGGGAGTGAAGCCAACGCCTCCAGGTTTACTGGCTGGTGTTCCAACCAAAACTTATTCTACATC AGAAAAGGAGGATCTCCCAAAGGAGTTCGACGCCAGATCTAAATGGTCTGGCTGCAGCACGATCGGGAAAATACTTGATC AAGGTCACTGTGGTGCGTGTTGGGCCTTTGGTGCTGTGGAGTGCCTGCAAGATCGTTTCTGCATTCATCACGGCGTGAAC GTTTCACTTTCTGTCAATGACATAGTGGCTTGCTGTGGGTTTCTGTGTGGCGATGGTTGTGAGGGAGGATATCCTATCTT CGCATGGCAATACTTCGTCGAGAACGGTGTTGTTACTGACGAGTGCGATCCATTCTTTGATCAGGTTGGCTGCCAGCATC CTGGATGCGAACCTGCTTATCCTACACCTGTGTGTGAAAAGAAATGCAAGGTTCAGAACCAAGTTTGGGAGGAAAAGAAA CATTTCAGCATCGATGCATACCAAGTAAACTCTGATCCACATGACATCATGGCAGAGGTCTACAAGAATGGCCCTGTAGA AGTTTCTTTCATAATTTATGAGGACTTTGCACACTACAAGTCAGGTGTTTACAAGCAAATCACAGGTAGGATGGTGGGAG GTCATGCCGCCAAATTGATTGGATGGGGAACAAGTGATGCTGGCGAGGATTACTGGCTTCTTGCAAATCAGTGGAACAGA GGATGGGGCGATGATGGGTACTTCAAGGTCATAAGGGGCACGAATGAATGTGGCATTGAAGGAGATGTTAATGCCGGTAT GCCCTCGACAAAGAACATCGCGGGTAGCGCCTTTGCAATGTGA |
Ta_4B:54348789-54348793:- does not have available information here.