Microexon ID Ta_4B:54038642-54038646:-
Species Triticum   Aestivum
Coordinates 4B:54038642..54038646
Microexon Cluster ID MEP08
Size 5
Phase 1
Pfam Domain Motif Peptidase_C1
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,5,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCAA
Microexon Amino Acid seq DQ
Microexon-tag DNA Seq TTTGACGCTAGAACTCAATGGTCCAGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCGTGGAAGCTCTCCAGGAT
Microexon-tag Amino Acid Seq FDARTQWSSCSTIGNILDQGHCGACWAFAAVEALQD
Microexon-tag spanning region54038491-54038843
Microexon-tag prediction score0.9497
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4B02G062400.1x
Reference Transcript ID TraesCS4B02G062400.1
Gene ID TraesCS4B02G062400
Gene Name NA
Transcript ID TraesCS4B02G062400.1
Protein ID
Gene ID TraesCS4B02G062400
Gene Name
Pfam domain motif Peptidase_C1
Motif E-value 6.60E-67
Motif start 98
Motif end 332
Protein seq >TraesCS4B02G062400.1
MGGVGVSLALLAAVVLSAAAAAPQLAGAAKAEHSLGIIQKDIIQTVNKHPNAGWTAGHNPYFANYTIEQFKHILGVKPTP
PGLLAGVPIQTHPESVDLPKEFDARTQWSSCSTIGNILDQGHCGACWAFAAVEALQDRFCIHLNMSVTLSVNDLLACCGF
LCGSGCNGGYPISAWRYFRRSGIVTEECDPYFDQTGCQHPGCEPAYPTPKCQRKCKVQNQVWKEKKHFSVNAYRVHSDPH
DIMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGGVMGGHAVKLIGWGTSDAGEDYWLLANQWNRGWGDDGYFKIIRGK
NECGIEEDVTAGMPSTKNTARNNDVAFGTAIL*
CDS seq >TraesCS4B02G062400.1
ATGGGGGGCGTGGGCGTCTCCCTTGCGCTGCTCGCCGCCGTCGTCCTCTCCGCCGCTGCTGCTGCCCCGCAGCTAGCGGG
AGCAGCCAAGGCAGAGCATTCCCTAGGAATCATCCAGAAGGACATCATTCAGACGGTCAACAAGCATCCCAATGCCGGGT
GGACGGCTGGACACAACCCCTACTTCGCAAACTACACTATTGAGCAATTCAAGCATATCCTGGGTGTGAAGCCAACGCCT
CCGGGTTTGCTCGCTGGTGTTCCAATCCAAACCCATCCAGAATCAGTGGATCTCCCCAAGGAGTTTGACGCTAGAACTCA
ATGGTCCAGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCGTGGAAG
CTCTCCAGGATCGTTTCTGTATTCATCTCAACATGAGCGTCACACTTTCGGTCAATGACCTACTGGCTTGCTGTGGTTTT
CTGTGTGGTAGCGGTTGTAATGGAGGATATCCTATCAGCGCATGGCGCTACTTCCGTCGCAGTGGTATCGTCACTGAGGA
GTGCGATCCATACTTCGATCAGACTGGTTGCCAGCATCCTGGATGCGAGCCAGCTTATCCTACACCAAAATGTCAAAGGA
AATGCAAGGTGCAGAACCAAGTGTGGAAGGAAAAGAAGCATTTCAGTGTTAATGCGTACAGAGTACATTCTGATCCCCAT
GACATCATGGCAGAGGTCTACAAAAATGGCCCTGTAGAAGTTGCTTTCACCGTTTATGAGGACTTCGCACACTACAAGTC
AGGAGTGTACAAGCACATCACAGGTGGCGTGATGGGAGGTCACGCCGTCAAGTTGATTGGTTGGGGAACCAGTGATGCTG
GCGAGGATTACTGGCTTCTTGCAAATCAGTGGAACAGAGGCTGGGGTGATGACGGGTACTTCAAGATCATAAGGGGCAAG
AATGAATGTGGCATCGAAGAAGATGTTACTGCCGGTATGCCCTCGACAAAGAACACGGCCAGAAACAATGATGTCGCCTT
TGGAACGGCCATACTTTGA
Ta_4B:54038642-54038646:- does not have available information here.