
Microexon ID | Ta_4B:54038642-54038646:- |
Species | Triticum Aestivum | Coordinates | 4B:54038642..54038646 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAA |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGACGCTAGAACTCAATGGTCCAGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCGTGGAAGCTCTCCAGGAT |
Microexon-tag Amino Acid Seq | FDARTQWSSCSTIGNILDQGHCGACWAFAAVEALQD |
Microexon-tag spanning region | 54038491-54038843 |
Microexon-tag prediction score | 0.9497 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G062400.1x |
Reference Transcript ID | TraesCS4B02G062400.1 |
Gene ID | TraesCS4B02G062400 |
Gene Name | NA |
Transcript ID | TraesCS4B02G062400.1 |
Protein ID | |
Gene ID | TraesCS4B02G062400 |
Gene Name | |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 6.60E-67 |
Motif start | 98 |
Motif end | 332 |
Protein seq | >TraesCS4B02G062400.1 MGGVGVSLALLAAVVLSAAAAAPQLAGAAKAEHSLGIIQKDIIQTVNKHPNAGWTAGHNPYFANYTIEQFKHILGVKPTP PGLLAGVPIQTHPESVDLPKEFDARTQWSSCSTIGNILDQGHCGACWAFAAVEALQDRFCIHLNMSVTLSVNDLLACCGF LCGSGCNGGYPISAWRYFRRSGIVTEECDPYFDQTGCQHPGCEPAYPTPKCQRKCKVQNQVWKEKKHFSVNAYRVHSDPH DIMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGGVMGGHAVKLIGWGTSDAGEDYWLLANQWNRGWGDDGYFKIIRGK NECGIEEDVTAGMPSTKNTARNNDVAFGTAIL* |
CDS seq | >TraesCS4B02G062400.1 ATGGGGGGCGTGGGCGTCTCCCTTGCGCTGCTCGCCGCCGTCGTCCTCTCCGCCGCTGCTGCTGCCCCGCAGCTAGCGGG AGCAGCCAAGGCAGAGCATTCCCTAGGAATCATCCAGAAGGACATCATTCAGACGGTCAACAAGCATCCCAATGCCGGGT GGACGGCTGGACACAACCCCTACTTCGCAAACTACACTATTGAGCAATTCAAGCATATCCTGGGTGTGAAGCCAACGCCT CCGGGTTTGCTCGCTGGTGTTCCAATCCAAACCCATCCAGAATCAGTGGATCTCCCCAAGGAGTTTGACGCTAGAACTCA ATGGTCCAGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCGTGGAAG CTCTCCAGGATCGTTTCTGTATTCATCTCAACATGAGCGTCACACTTTCGGTCAATGACCTACTGGCTTGCTGTGGTTTT CTGTGTGGTAGCGGTTGTAATGGAGGATATCCTATCAGCGCATGGCGCTACTTCCGTCGCAGTGGTATCGTCACTGAGGA GTGCGATCCATACTTCGATCAGACTGGTTGCCAGCATCCTGGATGCGAGCCAGCTTATCCTACACCAAAATGTCAAAGGA AATGCAAGGTGCAGAACCAAGTGTGGAAGGAAAAGAAGCATTTCAGTGTTAATGCGTACAGAGTACATTCTGATCCCCAT GACATCATGGCAGAGGTCTACAAAAATGGCCCTGTAGAAGTTGCTTTCACCGTTTATGAGGACTTCGCACACTACAAGTC AGGAGTGTACAAGCACATCACAGGTGGCGTGATGGGAGGTCACGCCGTCAAGTTGATTGGTTGGGGAACCAGTGATGCTG GCGAGGATTACTGGCTTCTTGCAAATCAGTGGAACAGAGGCTGGGGTGATGACGGGTACTTCAAGATCATAAGGGGCAAG AATGAATGTGGCATCGAAGAAGATGTTACTGCCGGTATGCCCTCGACAAAGAACACGGCCAGAAACAATGATGTCGCCTT TGGAACGGCCATACTTTGA |
Ta_4B:54038642-54038646:- does not have available information here.