
Microexon ID | Ta_4A:565303435-565303439:+ |
Species | Triticum Aestivum | Coordinates | 4A:565303435..565303439 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAA |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGACGCTAGAACTCAATGGTCCAGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCGTGGAAGCTCTCCAGGAT |
Microexon-tag Amino Acid Seq | FDARTQWSSCSTIGNILDQGHCGACWAFAAVEALQD |
Microexon-tag spanning region | 565303238-565303591 |
Microexon-tag prediction score | 0.9497 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G252900.1x |
Reference Transcript ID | TraesCS4A02G252900.1 |
Gene ID | TraesCS4A02G252900 |
Gene Name | NA |
Transcript ID | TraesCS4A02G252900.1 |
Protein ID | |
Gene ID | TraesCS4A02G252900 |
Gene Name | |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 2.20E-66 |
Motif start | 97 |
Motif end | 331 |
Protein seq | >TraesCS4A02G252900.1 MGGVGVSLALLVAVVLSAVAAAPQLAGTAKAEHSLGIIQKDIIQTVNKHPNAGWTAGHNPYFANYTIEQFKHILGVKPTP PGLLAGVPIKIHPEMDLPKEFDARTQWSSCSTIGNILDQGHCGACWAFAAVEALQDRFCIHLNMSVSLSVNDLLACCGFL CGSGCNGGYPISAWRYFRRSGVVTEECDPYFDQTGCQHPGCEPAYPTPKCQRKCKVENQAWKENKHFSVNAYRVHSNPHD IMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGGVMGGHAVKLIGWGTSDAGEDYWLLANQWNRGWGDDGYFKIIRGEN ECGIEGDVTAGMPSTKNTARNNDVAFGTAIL* |
CDS seq | >TraesCS4A02G252900.1 ATGGGGGGCGTCGGCGTCTCCCTTGCGCTGCTCGTCGCCGTCGTCCTCTCCGCCGTCGCTGCTGCCCCGCAGCTAGCCGG CACAGCCAAGGCAGAGCATTCCCTAGGAATCATCCAGAAGGACATCATTCAGACGGTCAACAAGCATCCCAATGCCGGGT GGACGGCTGGACACAACCCCTACTTTGCAAACTACACTATTGAGCAATTCAAGCATATCCTGGGAGTGAAGCCAACGCCT CCGGGTTTGCTCGCTGGTGTTCCGATCAAAATTCATCCAGAAATGGATCTCCCCAAGGAGTTTGACGCTAGAACTCAATG GTCCAGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCGTGGAAGCTC TCCAGGATCGTTTCTGTATTCATCTCAACATGAGCGTCTCCCTTTCGGTCAATGACCTACTGGCTTGCTGTGGTTTTCTG TGTGGTAGCGGTTGTAATGGAGGATATCCTATCAGCGCATGGCGCTACTTCCGTCGCAGTGGCGTCGTCACTGAGGAGTG CGATCCATACTTCGATCAGACTGGTTGCCAGCATCCTGGATGCGAGCCAGCTTATCCTACACCAAAATGTCAAAGGAAAT GCAAGGTGGAGAACCAAGCGTGGAAGGAAAATAAGCATTTCAGTGTTAACGCGTACAGAGTACATTCTAATCCCCATGAC ATCATGGCAGAGGTCTACAAAAATGGCCCTGTAGAAGTTGCTTTCACCGTTTATGAGGACTTCGCACACTACAAATCAGG AGTATACAAGCACATCACAGGTGGCGTGATGGGAGGTCATGCCGTCAAGTTGATCGGTTGGGGAACCAGTGATGCTGGCG AGGATTACTGGCTTCTTGCAAATCAGTGGAACAGAGGCTGGGGTGATGACGGATACTTCAAGATCATAAGGGGCGAGAAT GAATGTGGCATCGAAGGCGATGTTACTGCCGGTATGCCCTCGACAAAGAACACGGCCAGAAACAATGATGTCGCCTTTGG AACGGCCATACTTTGA |
Ta_4A:565303435-565303439:+ does not have available information here.