Microexon ID Ta_4A:565303435-565303439:+
Species Triticum   Aestivum
Coordinates 4A:565303435..565303439
Microexon Cluster ID MEP08
Size 5
Phase 1
Pfam Domain Motif Peptidase_C1
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,5,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCAA
Microexon Amino Acid seq DQ
Microexon-tag DNA Seq TTTGACGCTAGAACTCAATGGTCCAGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCGTGGAAGCTCTCCAGGAT
Microexon-tag Amino Acid Seq FDARTQWSSCSTIGNILDQGHCGACWAFAAVEALQD
Microexon-tag spanning region565303238-565303591
Microexon-tag prediction score0.9497
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4A02G252900.1x
Reference Transcript ID TraesCS4A02G252900.1
Gene ID TraesCS4A02G252900
Gene Name NA
Transcript ID TraesCS4A02G252900.1
Protein ID
Gene ID TraesCS4A02G252900
Gene Name
Pfam domain motif Peptidase_C1
Motif E-value 2.20E-66
Motif start 97
Motif end 331
Protein seq >TraesCS4A02G252900.1
MGGVGVSLALLVAVVLSAVAAAPQLAGTAKAEHSLGIIQKDIIQTVNKHPNAGWTAGHNPYFANYTIEQFKHILGVKPTP
PGLLAGVPIKIHPEMDLPKEFDARTQWSSCSTIGNILDQGHCGACWAFAAVEALQDRFCIHLNMSVSLSVNDLLACCGFL
CGSGCNGGYPISAWRYFRRSGVVTEECDPYFDQTGCQHPGCEPAYPTPKCQRKCKVENQAWKENKHFSVNAYRVHSNPHD
IMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGGVMGGHAVKLIGWGTSDAGEDYWLLANQWNRGWGDDGYFKIIRGEN
ECGIEGDVTAGMPSTKNTARNNDVAFGTAIL*
CDS seq >TraesCS4A02G252900.1
ATGGGGGGCGTCGGCGTCTCCCTTGCGCTGCTCGTCGCCGTCGTCCTCTCCGCCGTCGCTGCTGCCCCGCAGCTAGCCGG
CACAGCCAAGGCAGAGCATTCCCTAGGAATCATCCAGAAGGACATCATTCAGACGGTCAACAAGCATCCCAATGCCGGGT
GGACGGCTGGACACAACCCCTACTTTGCAAACTACACTATTGAGCAATTCAAGCATATCCTGGGAGTGAAGCCAACGCCT
CCGGGTTTGCTCGCTGGTGTTCCGATCAAAATTCATCCAGAAATGGATCTCCCCAAGGAGTTTGACGCTAGAACTCAATG
GTCCAGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCGTGGAAGCTC
TCCAGGATCGTTTCTGTATTCATCTCAACATGAGCGTCTCCCTTTCGGTCAATGACCTACTGGCTTGCTGTGGTTTTCTG
TGTGGTAGCGGTTGTAATGGAGGATATCCTATCAGCGCATGGCGCTACTTCCGTCGCAGTGGCGTCGTCACTGAGGAGTG
CGATCCATACTTCGATCAGACTGGTTGCCAGCATCCTGGATGCGAGCCAGCTTATCCTACACCAAAATGTCAAAGGAAAT
GCAAGGTGGAGAACCAAGCGTGGAAGGAAAATAAGCATTTCAGTGTTAACGCGTACAGAGTACATTCTAATCCCCATGAC
ATCATGGCAGAGGTCTACAAAAATGGCCCTGTAGAAGTTGCTTTCACCGTTTATGAGGACTTCGCACACTACAAATCAGG
AGTATACAAGCACATCACAGGTGGCGTGATGGGAGGTCATGCCGTCAAGTTGATCGGTTGGGGAACCAGTGATGCTGGCG
AGGATTACTGGCTTCTTGCAAATCAGTGGAACAGAGGCTGGGGTGATGACGGATACTTCAAGATCATAAGGGGCGAGAAT
GAATGTGGCATCGAAGGCGATGTTACTGCCGGTATGCCCTCGACAAAGAACACGGCCAGAAACAATGATGTCGCCTTTGG
AACGGCCATACTTTGA
Ta_4A:565303435-565303439:+ does not have available information here.