
Microexon ID | Ta_4A:564972370-564972374:+ |
Species | Triticum Aestivum | Coordinates | 4A:564972370..564972374 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAA |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTCGACGCCAGATCTAAATGGTCTGGCTGCACCACAATCGGGAAAATACTTGATCAAGGTCACTGTGGTGCCTGCTGGGCCTTTGGTGCCGTGGAGTGTCTGCAAGAT |
Microexon-tag Amino Acid Seq | FDARSKWSGCTTIGKILDQGHCGACWAFGAVECLQD |
Microexon-tag spanning region | 564972194-564972522 |
Microexon-tag prediction score | 0.9478 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G252700.1x |
Reference Transcript ID | TraesCS4A02G252700.1 |
Gene ID | TraesCS4A02G252700 |
Gene Name | NA |
Transcript ID | TraesCS4A02G252700.1 |
Protein ID | |
Gene ID | TraesCS4A02G252700 |
Gene Name | |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 4.10E-61 |
Motif start | 97 |
Motif end | 330 |
Protein seq | >TraesCS4A02G252700.1 MGGLLPLALLVVLSAAAAAPQLVGAARGDHSLPIIQEDIIRTVNNHPNAGWTAGHNPYLANYTIEQFKHILGVKPTPPGL LAGVPTKTYSRSEKEDLPKEFDARSKWSGCTTIGKILDQGHCGACWAFGAVECLQDRFCIHHGVNVSLSVNDIVACCGFL CGDGCDGGYPIFAWQYFVENGVVTDECDPFFDQVGCQHPGCEPAYPTPVCEKKCKVQNQVWEEKKHFSVDAYQVNSDPHD IMAEVYKNGPVEVSFIIYEDFAHYKSGVYKQITGRMVGGHAAKLIGWGTSDAGEDYWLLANQWNRGWGEDGYFKVIRGMN ECGIEGDVNAGMPSTKNIAGSAFAI* |
CDS seq | >TraesCS4A02G252700.1 ATGGGTGGCCTACTCCCGCTGGCGCTGCTCGTCGTCCTCTCTGCCGCCGCCGCTGCCCCTCAGCTCGTCGGAGCTGCGAG GGGAGACCATTCCCTTCCAATCATCCAGGAAGACATCATACGGACGGTCAACAACCATCCCAATGCCGGATGGACGGCTG GACACAACCCCTACCTCGCAAACTATACTATCGAGCAATTTAAGCATATCCTGGGAGTGAAGCCAACACCTCCAGGTTTA CTGGCTGGTGTCCCAACCAAAACTTATTCAAGATCAGAAAAGGAGGATCTCCCAAAGGAGTTCGACGCCAGATCTAAATG GTCTGGCTGCACCACAATCGGGAAAATACTTGATCAAGGTCACTGTGGTGCCTGCTGGGCCTTTGGTGCCGTGGAGTGTC TGCAAGATCGTTTCTGCATTCATCATGGCGTGAACGTTTCACTTTCTGTCAATGACATAGTGGCTTGCTGTGGGTTTCTG TGTGGCGATGGTTGTGATGGAGGATATCCTATCTTCGCATGGCAATACTTCGTCGAGAACGGTGTTGTTACTGACGAGTG TGATCCATTCTTTGATCAGGTTGGCTGCCAGCATCCTGGATGCGAACCTGCTTATCCTACACCTGTGTGTGAAAAGAAAT GCAAGGTGCAGAACCAAGTTTGGGAGGAAAAGAAACATTTCAGTGTCGATGCATACCAAGTAAACTCTGATCCACATGAC ATCATGGCAGAGGTCTACAAGAATGGCCCTGTAGAAGTTTCTTTCATAATTTATGAGGACTTTGCACACTACAAGTCAGG TGTTTACAAGCAAATCACAGGTAGGATGGTGGGAGGTCATGCCGCCAAATTGATTGGATGGGGAACAAGTGATGCTGGCG AGGATTACTGGCTTCTTGCAAATCAGTGGAACAGAGGATGGGGCGAAGACGGGTACTTCAAGGTCATAAGGGGCATGAAT GAATGTGGCATTGAAGGAGATGTTAATGCCGGTATGCCCTCGACAAAGAACATCGCGGGTAGCGCCTTTGCAATCTGA |
Ta_4A:564972370-564972374:+ does not have available information here.