Microexon ID Sb_2:68920868-68920872:-
Species Sorghum   Bicolor
Coordinates 2:68920868..68920872
Microexon Cluster ID MEP08
Size 5
Phase 1
Pfam Domain Motif Peptidase_C1
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,5,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCAA
Microexon Amino Acid seq DQ
Microexon-tag DNA Seq TTTGATGCTAGATCTGTGTGGTCCCGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCATTGTGGCTCTTGTTGGGCTTTTGGTGCTGTGGAGTGCCTCCAGGAC
Microexon-tag Amino Acid Seq FDARSVWSRCSTIGNILDQGHCGSCWAFGAVECLQD
Microexon-tag spanning region68920728-68921042
Microexon-tag prediction score0.9635
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG36303x
Reference Transcript ID KXG36303
Gene ID SORBI_3002G315800
Gene Name NA
Transcript ID KXG36303
Protein ID
Gene ID SORBI_3002G315800
Gene Name
Pfam domain motif Peptidase_C1
Motif E-value 6.10E-65
Motif start 101
Motif end 335
Protein seq >KXG36303
MAGALQPPPQLLPLLLALLLVSAAAPQVVGVGVGDNSLRIIQEDIIETVNNHPSAGWTASRNPYFSNYTIAQFKHILGVK
PAPKNVLSDVPVKTYPRSLELPKEFDARSVWSRCSTIGNILDQGHCGSCWAFGAVECLQDRFCIHFNTSILLSVNDLLAC
CGFMCGDGCDGGYPIMAWHYFVQNGVVTDECDPYFDQVGCKHPGCEPAYDTPKCEKKCKVQNQVWQEKKHFSIDAYRINS
DPHDIMAEVYINGPVEVAFTVYEDFAHYKSGVYKHITGGIMGGHAVKLIGWGTSDAGEDYWLLANQWNRGWGDDGYFKII
RGTNECGIEEDVVAGMPSTKNMVPNFGSAVGTAVV*
CDS seq >KXG36303
ATGGCCGGCGCACTGCAGCCGCCGCCCCAGCTGCTGCCGCTGCTGCTTGCACTCCTCCTCGTCTCTGCTGCCGCCCCTCA
GGTTGTTGGAGTGGGGGTCGGAGACAACTCCCTGAGAATCATCCAGGAGGATATTATTGAGACAGTCAACAACCATCCCA
GTGCTGGGTGGACAGCCTCACGTAATCCTTACTTTTCAAACTATACCATTGCGCAATTTAAGCACATACTTGGAGTGAAA
CCAGCACCAAAGAATGTACTCAGTGATGTTCCTGTCAAAACTTATCCAAGATCACTGGAACTTCCAAAAGAGTTTGATGC
TAGATCTGTGTGGTCCCGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCATTGTGGCTCTTGTTGGGCTTTTGGTG
CTGTGGAGTGCCTCCAGGACCGTTTTTGCATTCACTTCAACACGAGCATTTTACTTTCAGTCAATGACCTACTGGCATGC
TGTGGTTTTATGTGCGGCGATGGGTGTGATGGAGGCTATCCTATAATGGCATGGCACTACTTTGTTCAAAATGGTGTTGT
TACTGATGAGTGTGATCCATACTTTGATCAGGTCGGTTGCAAGCATCCTGGATGTGAACCTGCTTATGATACACCTAAGT
GTGAAAAGAAATGCAAGGTGCAGAACCAAGTTTGGCAGGAAAAGAAGCATTTTAGCATTGATGCGTATAGAATAAATTCA
GATCCACATGACATAATGGCAGAGGTCTACATAAATGGTCCTGTAGAAGTCGCTTTCACAGTTTACGAGGATTTCGCACA
CTACAAATCTGGAGTATACAAGCACATCACCGGTGGCATTATGGGTGGCCATGCCGTCAAGTTGATTGGATGGGGAACCA
GTGATGCTGGAGAGGATTACTGGCTTCTTGCAAATCAGTGGAATAGGGGCTGGGGCGATGATGGTTACTTCAAGATCATA
AGGGGCACAAATGAATGTGGCATCGAGGAGGACGTTGTTGCTGGAATGCCATCTACAAAGAATATGGTTCCAAACTTCGG
CAGTGCAGTTGGAACAGCTGTAGTTTAA
Sb_2:68920868-68920872:- does not have available information here.