
Microexon ID | Sb_2:68920868-68920872:- |
Species | Sorghum Bicolor | Coordinates | 2:68920868..68920872 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAA |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCTAGATCTGTGTGGTCCCGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCATTGTGGCTCTTGTTGGGCTTTTGGTGCTGTGGAGTGCCTCCAGGAC |
Microexon-tag Amino Acid Seq | FDARSVWSRCSTIGNILDQGHCGSCWAFGAVECLQD |
Microexon-tag spanning region | 68920728-68921042 |
Microexon-tag prediction score | 0.9635 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG36303x |
Reference Transcript ID | KXG36303 |
Gene ID | SORBI_3002G315800 |
Gene Name | NA |
Transcript ID | KXG36303 |
Protein ID | |
Gene ID | SORBI_3002G315800 |
Gene Name | |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 6.10E-65 |
Motif start | 101 |
Motif end | 335 |
Protein seq | >KXG36303 MAGALQPPPQLLPLLLALLLVSAAAPQVVGVGVGDNSLRIIQEDIIETVNNHPSAGWTASRNPYFSNYTIAQFKHILGVK PAPKNVLSDVPVKTYPRSLELPKEFDARSVWSRCSTIGNILDQGHCGSCWAFGAVECLQDRFCIHFNTSILLSVNDLLAC CGFMCGDGCDGGYPIMAWHYFVQNGVVTDECDPYFDQVGCKHPGCEPAYDTPKCEKKCKVQNQVWQEKKHFSIDAYRINS DPHDIMAEVYINGPVEVAFTVYEDFAHYKSGVYKHITGGIMGGHAVKLIGWGTSDAGEDYWLLANQWNRGWGDDGYFKII RGTNECGIEEDVVAGMPSTKNMVPNFGSAVGTAVV* |
CDS seq | >KXG36303 ATGGCCGGCGCACTGCAGCCGCCGCCCCAGCTGCTGCCGCTGCTGCTTGCACTCCTCCTCGTCTCTGCTGCCGCCCCTCA GGTTGTTGGAGTGGGGGTCGGAGACAACTCCCTGAGAATCATCCAGGAGGATATTATTGAGACAGTCAACAACCATCCCA GTGCTGGGTGGACAGCCTCACGTAATCCTTACTTTTCAAACTATACCATTGCGCAATTTAAGCACATACTTGGAGTGAAA CCAGCACCAAAGAATGTACTCAGTGATGTTCCTGTCAAAACTTATCCAAGATCACTGGAACTTCCAAAAGAGTTTGATGC TAGATCTGTGTGGTCCCGTTGCAGCACAATTGGGAACATACTTGATCAAGGTCATTGTGGCTCTTGTTGGGCTTTTGGTG CTGTGGAGTGCCTCCAGGACCGTTTTTGCATTCACTTCAACACGAGCATTTTACTTTCAGTCAATGACCTACTGGCATGC TGTGGTTTTATGTGCGGCGATGGGTGTGATGGAGGCTATCCTATAATGGCATGGCACTACTTTGTTCAAAATGGTGTTGT TACTGATGAGTGTGATCCATACTTTGATCAGGTCGGTTGCAAGCATCCTGGATGTGAACCTGCTTATGATACACCTAAGT GTGAAAAGAAATGCAAGGTGCAGAACCAAGTTTGGCAGGAAAAGAAGCATTTTAGCATTGATGCGTATAGAATAAATTCA GATCCACATGACATAATGGCAGAGGTCTACATAAATGGTCCTGTAGAAGTCGCTTTCACAGTTTACGAGGATTTCGCACA CTACAAATCTGGAGTATACAAGCACATCACCGGTGGCATTATGGGTGGCCATGCCGTCAAGTTGATTGGATGGGGAACCA GTGATGCTGGAGAGGATTACTGGCTTCTTGCAAATCAGTGGAATAGGGGCTGGGGCGATGATGGTTACTTCAAGATCATA AGGGGCACAAATGAATGTGGCATCGAGGAGGACGTTGTTGCTGGAATGCCATCTACAAAGAATATGGTTCCAAACTTCGG CAGTGCAGTTGGAACAGCTGTAGTTTAA |
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