
Microexon ID | Ps_NC_039359.1:20830120-20830124:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:20830120..20830124 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ps_NC_039359.1:20830120-20830124:- does not have available information here.
Transcript ID | XM_026590695.1 |
Protein ID | XP_026446480.1 |
Gene ID | LOC113347104 |
Gene Name | NA |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 1.3e-66 |
Motif start | 95 |
Motif end | 329 |
Protein seq | >XP_026446480.1 MNMVPLVILILGTIFLAPNPQADAIKSGPEILQDTIVQQINANPNAGWEAGLNSRFSNYTVSQFKYLLGVKPRTASSRND LLDVPIVSHPKNLELPKEFDARTAWPQCTTIGKILDQGHCGSCWAVAAAEALSDRFCVNLGMNIALSANDLLACCGFMCG DGCDGGYPISAWRYFVQNGIVTEACDPYFDAIGCSHPGCEPGFPTPKCVKQCKDKNQIWKQSKHFSVNAYQVGSDPIDIM AEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTTEDGEDYWLLANQWNRSWGDDGYFKIRRGTNEC GIEEDVVAGMPSTKNILIQKYAATADDFSDVPTDASV* |
CDS seq | >XM_026590695.1 ATGAATATGGTGCCTCTGGTAATCCTAATCCTGGGAACCATTTTCTTGGCTCCTAACCCACAGGCGGATGCAATAAAATC AGGCCCGGAGATTCTTCAGGACACCATTGTCCAACAGATAAATGCAAACCCTAATGCTGGATGGGAAGCTGGCTTGAATT CCCGCTTTTCAAATTACACAGTTTCCCAATTCAAGTACCTATTGGGTGTAAAACCGAGAACAGCATCATCCCGCAATGAT TTGCTGGACGTTCCTATTGTCAGTCACCCCAAAAACTTGGAGTTGCCTAAGGAATTTGATGCCAGAACAGCTTGGCCTCA ATGTACCACCATCGGCAAAATTCTTGATCAGGGGCATTGTGGTTCTTGTTGGGCTGTTGCTGCAGCGGAAGCACTGTCTG ATCGTTTCTGCGTCAATCTTGGCATGAACATTGCCTTGTCTGCTAATGACCTCTTGGCATGTTGTGGCTTTATGTGCGGA GATGGTTGTGACGGTGGTTATCCTATTTCTGCGTGGCGATATTTTGTACAAAATGGCATTGTTACTGAAGCGTGTGATCC TTACTTTGATGCCATTGGATGTTCTCACCCTGGTTGTGAACCTGGATTTCCCACTCCTAAGTGTGTGAAACAATGCAAAG ATAAAAACCAGATCTGGAAGCAGTCAAAGCACTTCAGTGTCAATGCATACCAGGTCGGTTCCGACCCCATAGATATCATG GCAGAGGTCTACAAGAATGGTCCTGTCGAGGTGGCTTTCACTGTTTATGAGGATTTTGCTCATTACAAATCGGGCGTTTA CAAACACATCACAGGGGATGTGATGGGAGGACACGCTGTAAAGTTGATTGGTTGGGGAACTACTGAAGATGGAGAGGATT ATTGGCTTTTGGCCAACCAGTGGAATAGAAGCTGGGGAGATGACGGTTACTTCAAAATCAGGAGAGGTACAAATGAATGT GGAATTGAAGAGGATGTGGTTGCTGGTATGCCTTCTACCAAGAACATTTTAATCCAGAAGTACGCTGCCACTGCTGATGA TTTTTCTGACGTTCCAACTGATGCCTCCGTCTGA |
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCCAGAACAGCTTGGCCTCAATGTACCACCATCGGCAAAATTCTTGATCAGGGGCATTGTGGTTCTTGTTGGGCTGTTGCTGCTGCAGAAGCACTGTCTGAT |
Microexon-tag Amino Acid seq | FDARTAWPQCTTIGKILDQGHCGSCWAVAAAEALSD |
Transcript ID | Ps.8971.2 |
Gene ID | Ps.8971 |
Gene Name | NA |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 2.4e-65 |
Motif start | 95 |
Motif end | 329 |
Protein seq | >Ps.8971.2 MNMVPLVILILGTIFLAPNPQADAIKSGPEILQDTIVQQINANPNAGWEAGLNSRFSNYTVSQFKYLLGVKPRTASSRND LLDVPIVSHPKNLELPKEFDARTAWPQCTTIGKILDQGHCGSCWAVAAAEALSDRFCVNLGMNITLSANDLLACCGFMCG NGCGGGVPIFAWRYFVHHGIVTEECDPYFDAIGCSHPGCEPGFPTPKCVKHCKDKNQIWKQSKHFGVNAYHVKSNPTDIM AEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTTEDGEDYWLLANQWNRSWGDDGYFKIRRGTNEC GIERGVFAGMPSTKNILIRKYAADDDDSYVPNDASI* |
CDS seq | >Ps.8971.2 ATGAATATGGTGCCTCTGGTAATCCTAATCCTGGGAACCATTTTCTTGGCTCCTAACCCACAGGCGGATGCAATAAAATC AGGCCCGGAGATTCTTCAGGACACCATTGTCCAACAGATAAATGCAAACCCTAATGCTGGATGGGAAGCTGGCTTGAATT CCCGCTTTTCAAATTACACAGTTTCCCAATTCAAGTACCTATTGGGTGTAAAACCGAGAACAGCATCATCCCGCAATGAT TTGCTGGACGTTCCTATTGTCAGTCACCCCAAAAACTTGGAGTTGCCTAAGGAATTTGATGCCAGAACAGCTTGGCCTCA ATGTACCACCATCGGCAAAATTCTTGATCAGGGGCATTGTGGTTCTTGTTGGGCTGTTGCTGCTGCAGAAGCACTGTCTG ATCGTTTCTGCGTCAATCTTGGCATGAACATTACCTTATCTGCTAATGACCTCTTGGCATGTTGTGGCTTTATGTGCGGA AATGGTTGTGGAGGTGGTGTTCCTATTTTTGCATGGCGATATTTTGTACACCATGGCATTGTTACTGAAGAGTGTGATCC TTACTTCGATGCCATTGGATGTTCTCACCCTGGTTGTGAACCTGGATTTCCCACTCCTAAGTGCGTGAAACATTGCAAAG ATAAAAACCAGATCTGGAAGCAGTCAAAGCACTTCGGTGTCAATGCATATCATGTCAAATCCAACCCCACTGATATCATG GCAGAGGTCTACAAAAATGGTCCTGTCGAGGTGGCTTTCACTGTTTATGAGGATTTTGCTCATTACAAATCGGGTGTTTA CAAGCACATCACAGGGGATGTAATGGGAGGTCATGCTGTAAAGTTGATTGGCTGGGGAACTACTGAAGACGGAGAGGATT ATTGGCTTTTGGCCAACCAGTGGAATAGAAGCTGGGGAGATGACGGTTACTTCAAAATCAGGAGAGGTACAAATGAATGT GGAATTGAAAGGGGTGTGTTTGCTGGTATGCCTTCTACCAAGAACATTTTAATCCGGAAATATGCTGCTGATGATGATGA TTCTTACGTTCCAAATGATGCTTCCATCTGA |