
Microexon ID | Ps_NC_039359.1:20826833-20826837:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:20826833..20826837 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCCAGAACAGCTTGGCCCCAGTGTAACACCATCGGCAAAATTCTTGATCAGGGGCATTGTGGTTCTTGTTGGGCTGTTGCTGCTGCAGAAGCACTGTCTGAT |
Microexon-tag Amino Acid Seq | FDARTAWPQCNTIGKILDQGHCGSCWAVAAAEALSD |
Microexon-tag spanning region | 20826690-20827011 |
Microexon-tag prediction score | 0.9671 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026590696.1x |
Reference Transcript ID | XM_026590696.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026590696.1 |
Protein ID | XP_026446481.1 |
Gene ID | LOC113347105 |
Gene Name | NA |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 2e-65 |
Motif start | 95 |
Motif end | 329 |
Protein seq | >XP_026446481.1 MNMVPLVILILGAIFLAPNFQVDAIKSGLGILQDTIVQQINSNPNAGWEAGLNSRFSNYTVSQFKYLLGVKPITAASHND FLDIPIVSHPKNLKLPKEFDARTAWPQCNTIGKILDQGHCGSCWAVAAAEALSDRFCVNLGMNITLSANDLLACCGFMCG NGCGGGVPIFAWRYFVHHGIVTEECDPYFDAIGCSHPGCEPGFPTPKCVKHCKDKNQIWKQSKHFGVNAYHVKSNPTDIM AEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTTEDGEDYWLLANQWNRSWGDDGYFKIRRGTNEC GIERGVFAGMPSTKNILIRKYAADDDDSYVPNDASI* |
CDS seq | >XM_026590696.1 ATGAATATGGTGCCTCTGGTAATCCTAATCTTGGGAGCCATTTTCTTGGCTCCTAATTTCCAGGTGGATGCAATAAAATC TGGCCTGGGGATTCTCCAGGACACAATTGTCCAACAGATCAATTCAAATCCTAATGCTGGATGGGAAGCTGGCTTGAATT CCCGCTTTTCCAATTACACAGTTTCACAATTCAAGTACCTATTGGGTGTGAAACCAATAACAGCAGCCTCCCACAATGAT TTTCTGGATATTCCTATTGTTAGTCATCCCAAAAACTTGAAGTTGCCTAAGGAATTTGATGCCAGAACAGCTTGGCCCCA GTGTAACACCATCGGCAAAATTCTTGATCAGGGGCATTGTGGTTCTTGTTGGGCTGTTGCTGCTGCAGAAGCACTGTCTG ATCGTTTCTGCGTCAATCTTGGCATGAACATTACCTTATCTGCTAATGACCTCTTGGCATGTTGTGGCTTTATGTGCGGA AATGGTTGTGGAGGTGGTGTTCCTATTTTTGCATGGCGATATTTTGTACACCATGGCATTGTTACTGAAGAGTGTGATCC TTACTTCGATGCCATTGGATGTTCTCACCCTGGTTGTGAACCTGGATTTCCCACTCCTAAGTGCGTGAAACATTGCAAAG ATAAAAACCAGATCTGGAAGCAGTCAAAGCACTTCGGTGTCAATGCATATCATGTCAAATCCAACCCCACTGATATCATG GCAGAGGTCTACAAAAATGGTCCTGTCGAGGTGGCTTTCACTGTTTATGAGGATTTTGCTCATTACAAATCGGGTGTTTA CAAGCACATCACAGGGGATGTAATGGGAGGTCATGCTGTAAAGTTGATTGGCTGGGGAACTACTGAAGACGGAGAGGATT ATTGGCTTTTGGCCAACCAGTGGAATAGAAGCTGGGGAGATGACGGTTACTTCAAAATCAGGAGAGGTACAAATGAATGT GGAATTGAAAGGGGTGTGTTTGCTGGTATGCCTTCTACCAAGAACATTTTAATCCGGAAATATGCTGCTGATGATGATGA TTCTTACGTTCCAAATGATGCTTCCATCTGA |
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCCAGAACAGCTTGGCCCCAGTGTAACACCATCGGCAAAATTCTTGATCAGGGGCATTGTGGTTCTTGTTGGGCTGTTGCTGCTGCAGAAGCACTGTCTGAT |
Microexon-tag Amino Acid seq | FDARTAWPQCNTIGKILDQGHCGSCWAVAAAEALSD |
Transcript ID | Ps.8971.4 |
Gene ID | Ps.8971 |
Gene Name | NA |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 2e-65 |
Motif start | 95 |
Motif end | 329 |
Protein seq | >Ps.8971.4 MNMVPLVILILGAIFLAPNFQVDAIKSGLGILQDTIVQQINSNPNAGWEAGLNSRFSNYTVSQFKYLLGVKPITAASHND FLDIPIVSHPKNLKLPKEFDARTAWPQCNTIGKILDQGHCGSCWAVAAAEALSDRFCVNLGMNITLSANDLLACCGFMCG NGCGGGVPIFAWRYFVHHGIVTEECDPYFDAIGCSHPGCEPGFPTPKCVKHCKDKNQIWKQSKHFGVNAYHVKSNPTDIM AEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTTEDGEDYWLLANQWNRSWGDDGYFKIRRGTNEC GIERGVFAGMPSTKNILIRKYAADDDDSYVPNDASI* |
CDS seq | >Ps.8971.4 ATGAATATGGTGCCTCTGGTAATCCTAATCTTGGGAGCCATTTTCTTGGCTCCTAATTTCCAGGTGGATGCAATAAAATC TGGCCTGGGGATTCTCCAGGACACAATTGTCCAACAGATCAATTCAAATCCTAATGCTGGATGGGAAGCTGGCTTGAATT CCCGCTTTTCCAATTACACAGTTTCACAATTCAAGTACCTATTGGGTGTGAAACCAATAACAGCAGCCTCCCACAATGAT TTTCTGGATATTCCTATTGTTAGTCATCCCAAAAACTTGAAGTTGCCTAAGGAATTTGATGCCAGAACAGCTTGGCCCCA GTGTAACACCATCGGCAAAATTCTTGATCAGGGGCATTGTGGTTCTTGTTGGGCTGTTGCTGCTGCAGAAGCACTGTCTG ATCGTTTCTGCGTCAATCTTGGCATGAACATTACCTTATCTGCTAATGACCTCTTGGCATGTTGTGGCTTTATGTGCGGA AATGGTTGTGGAGGTGGTGTTCCTATTTTTGCATGGCGATATTTTGTACACCATGGCATTGTTACTGAAGAGTGTGATCC TTACTTCGATGCCATTGGATGTTCTCACCCTGGTTGTGAACCTGGATTTCCCACTCCTAAGTGCGTGAAACATTGCAAAG ATAAAAACCAGATCTGGAAGCAGTCAAAGCACTTCGGTGTCAATGCATATCATGTCAAATCCAACCCCACTGATATCATG GCAGAGGTCTACAAAAATGGTCCTGTCGAGGTGGCTTTCACTGTTTATGAGGATTTTGCTCATTACAAATCGGGTGTTTA CAAGCACATCACAGGGGATGTAATGGGAGGTCATGCTGTAAAGTTGATTGGCTGGGGAACTACTGAAGACGGAGAGGATT ATTGGCTTTTGGCCAACCAGTGGAATAGAAGCTGGGGAGATGACGGTTACTTCAAAATCAGGAGAGGTACAAATGAATGT GGAATTGAAAGGGGTGTGTTTGCTGGTATGCCTTCTACCAAGAACATTTTAATCCGGAAATATGCTGCTGATGATGATGA TTCTTACGTTCCAAATGATGCTTCCATCTGA |