Microexon ID Os_5:14163511-14163515:+
Species Oryza sativa
Coordinates 5:14163511..14163515
Microexon Cluster ID MEP08
Size 5
Phase 1
Pfam Domain Motif Peptidase_C1
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 52,5,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCAG
Microexon Amino Acid seq DQ
Microexon-tag DNA Seq TTTGATGCCAGGTCTGCATGGTCACAGTGTAACACAATTGGGACCATACTTGATCAGGGTCACTGTGGCTCGTGTTGGGCATTTGGTGCTGTGGAGTGTCTCCAGGAT
Microexon-tag Amino Acid Seq FDARSAWSQCNTIGTILDQGHCGSCWAFGAVECLQD
Microexon-tag spanning region14163338-14163657
Microexon-tag prediction score0.9686
Overlapped with the annotated transcript (%) 91.96
New Transcript ID Os05t0310500-01x
Reference Transcript ID Os05t0310500-01
Gene ID Os05g0310500
Gene Name OsCatB
Os_5:14163511-14163515:+ does not have available information here.
Microexon DNA seq ATCAG
Microexon Amino Acid seq DQ
Microexon-tag DNA Seq TTTGATGCCAGGTCTGCATGGTCACAGTGTAACACAATTGGGACCATACTTGATCAGGGTCACTGTGGCTCGTGTTGGGCATTTGGTGCTGTGGAGTGTCTCCAGGAT
Microexon-tag Amino Acid seq FDARSAWSQCNTIGTILDQGHCGSCWAFGAVECLQD
Transcript ID Os.25910.2
Gene ID Os.25910
Gene Name OsCatB
Pfam domain motif Peptidase_C1
Motif E-value 2.7e-66
Motif start 102
Motif end 336
Protein seq >Os.25910.2
MGMPLLLLLLILVAAGPQAGRAAKPIPNLQLMTKEGGSSRIIQDDIIKAINKHPNAGWTAARNPYFANYTTAQFKHILGV
KPTPHSVLNDVPVKTYPRSLMLPKEFDARSAWSQCNTIGTILDQGHCGSCWAFGAVECLQDRFCIHFNMNISLSVNDLVA
CCGFMCGDGCDGGYPIMAWRYFVRNGVVTDECDPYFDQVGCKHPGCEPAYPTPVCEKKCKVQNQVWLEKKHFSVNAYRVN
SDPHDIMAEVYQNGPVEVAFTVYEDFAHYKSGVYKHITGGMMGGHAVKLIGWGTTDAGEDYWLLANQWNRGWGDDGYFKI
IRGTNECGIEEDVVAGMPSTKNMVRNYDSAFGVGTAIV*
CDS seq >Os.25910.2
ATGGGCATGCCTCTGCTGCTGCTGCTGCTGATCCTCGTCGCTGCTGGCCCCCAGGCAGGCAGAGCTGCAAAGCCAATCCC
AAATCTCCAGCTCATGACCAAGGAGGGCGGCAGTTCAAGAATCATCCAGGACGACATCATAAAGGCAATCAACAAGCATC
CCAATGCTGGCTGGACGGCTGCACGGAATCCATACTTTGCAAACTATACTACTGCGCAATTCAAACATATCCTTGGAGTG
AAGCCAACACCGCATAGTGTGCTAAATGATGTCCCTGTCAAAACTTATCCAAGATCGCTGATGCTTCCAAAGGAGTTTGA
TGCCAGGTCTGCATGGTCACAGTGTAACACAATTGGGACCATACTTGATCAGGGTCACTGTGGCTCGTGTTGGGCATTTG
GTGCTGTGGAGTGTCTCCAGGATCGTTTCTGCATTCATTTCAACATGAACATTTCGCTATCTGTCAATGACCTAGTGGCA
TGCTGCGGTTTCATGTGCGGCGATGGTTGTGATGGAGGCTATCCTATCATGGCATGGCGCTACTTTGTTCGGAATGGTGT
TGTTACCGATGAGTGCGATCCATACTTTGATCAGGTCGGTTGTAAGCATCCAGGATGCGAACCTGCTTATCCTACGCCAG
TGTGCGAGAAGAAATGCAAGGTGCAGAACCAAGTTTGGCTGGAAAAGAAGCATTTCAGTGTCAATGCATACAGAGTAAAT
TCTGATCCACATGACATAATGGCAGAGGTCTACCAAAATGGCCCTGTAGAAGTTGCTTTCACCGTTTATGAGGATTTTGC
ACACTACAAATCAGGAGTATACAAGCACATCACAGGTGGCATGATGGGTGGTCATGCTGTCAAGTTGATTGGATGGGGAA
CCACGGATGCTGGCGAGGATTACTGGCTGCTTGCAAACCAGTGGAACAGAGGATGGGGCGATGATGGGTACTTCAAGATC
ATAAGGGGCACAAACGAATGTGGCATCGAAGAAGATGTTGTTGCTGGTATGCCCTCGACGAAGAACATGGTGAGGAACTA
TGATAGCGCCTTCGGAGTCGGAACGGCCATAGTTTGA