
Microexon ID | Os_5:14163511-14163515:+ |
Species | Oryza sativa | Coordinates | 5:14163511..14163515 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCCAGGTCTGCATGGTCACAGTGTAACACAATTGGGACCATACTTGATCAGGGTCACTGTGGCTCGTGTTGGGCATTTGGTGCTGTGGAGTGTCTCCAGGAT |
Microexon-tag Amino Acid Seq | FDARSAWSQCNTIGTILDQGHCGSCWAFGAVECLQD |
Microexon-tag spanning region | 14163338-14163657 |
Microexon-tag prediction score | 0.9686 |
Overlapped with the annotated transcript (%) | 91.96 |
New Transcript ID | Os05t0310500-01x |
Reference Transcript ID | Os05t0310500-01 |
Gene ID | Os05g0310500 |
Gene Name | OsCatB |
Os_5:14163511-14163515:+ does not have available information here.
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCCAGGTCTGCATGGTCACAGTGTAACACAATTGGGACCATACTTGATCAGGGTCACTGTGGCTCGTGTTGGGCATTTGGTGCTGTGGAGTGTCTCCAGGAT |
Microexon-tag Amino Acid seq | FDARSAWSQCNTIGTILDQGHCGSCWAFGAVECLQD |
Transcript ID | Os.25910.2 |
Gene ID | Os.25910 |
Gene Name | OsCatB |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 2.7e-66 |
Motif start | 102 |
Motif end | 336 |
Protein seq | >Os.25910.2 MGMPLLLLLLILVAAGPQAGRAAKPIPNLQLMTKEGGSSRIIQDDIIKAINKHPNAGWTAARNPYFANYTTAQFKHILGV KPTPHSVLNDVPVKTYPRSLMLPKEFDARSAWSQCNTIGTILDQGHCGSCWAFGAVECLQDRFCIHFNMNISLSVNDLVA CCGFMCGDGCDGGYPIMAWRYFVRNGVVTDECDPYFDQVGCKHPGCEPAYPTPVCEKKCKVQNQVWLEKKHFSVNAYRVN SDPHDIMAEVYQNGPVEVAFTVYEDFAHYKSGVYKHITGGMMGGHAVKLIGWGTTDAGEDYWLLANQWNRGWGDDGYFKI IRGTNECGIEEDVVAGMPSTKNMVRNYDSAFGVGTAIV* |
CDS seq | >Os.25910.2 ATGGGCATGCCTCTGCTGCTGCTGCTGCTGATCCTCGTCGCTGCTGGCCCCCAGGCAGGCAGAGCTGCAAAGCCAATCCC AAATCTCCAGCTCATGACCAAGGAGGGCGGCAGTTCAAGAATCATCCAGGACGACATCATAAAGGCAATCAACAAGCATC CCAATGCTGGCTGGACGGCTGCACGGAATCCATACTTTGCAAACTATACTACTGCGCAATTCAAACATATCCTTGGAGTG AAGCCAACACCGCATAGTGTGCTAAATGATGTCCCTGTCAAAACTTATCCAAGATCGCTGATGCTTCCAAAGGAGTTTGA TGCCAGGTCTGCATGGTCACAGTGTAACACAATTGGGACCATACTTGATCAGGGTCACTGTGGCTCGTGTTGGGCATTTG GTGCTGTGGAGTGTCTCCAGGATCGTTTCTGCATTCATTTCAACATGAACATTTCGCTATCTGTCAATGACCTAGTGGCA TGCTGCGGTTTCATGTGCGGCGATGGTTGTGATGGAGGCTATCCTATCATGGCATGGCGCTACTTTGTTCGGAATGGTGT TGTTACCGATGAGTGCGATCCATACTTTGATCAGGTCGGTTGTAAGCATCCAGGATGCGAACCTGCTTATCCTACGCCAG TGTGCGAGAAGAAATGCAAGGTGCAGAACCAAGTTTGGCTGGAAAAGAAGCATTTCAGTGTCAATGCATACAGAGTAAAT TCTGATCCACATGACATAATGGCAGAGGTCTACCAAAATGGCCCTGTAGAAGTTGCTTTCACCGTTTATGAGGATTTTGC ACACTACAAATCAGGAGTATACAAGCACATCACAGGTGGCATGATGGGTGGTCATGCTGTCAAGTTGATTGGATGGGGAA CCACGGATGCTGGCGAGGATTACTGGCTGCTTGCAAACCAGTGGAACAGAGGATGGGGCGATGATGGGTACTTCAAGATC ATAAGGGGCACAAACGAATGTGGCATCGAAGAAGATGTTGTTGCTGGTATGCCCTCGACGAAGAACATGGTGAGGAACTA TGATAGCGCCTTCGGAGTCGGAACGGCCATAGTTTGA |