| Microexon ID | Bn_scaffoldC09:234081-234085:+ |
| Species | Brassica Napus | Coordinates | scaffoldC09:234081..234085 |
| Microexon Cluster ID | MEP08 |
| Size | 5 |
| Phase | 1 |
| Pfam Domain Motif | Peptidase_C1 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCAG |
| Microexon Amino Acid seq | DQ |
| Microexon-tag DNA Seq | TTCGATGCTAGAACCGCTTGGCCTCAATGCACCAGCATTGGCAACATCTTAGATCAGGGACATTGTGGTTCTTGCTGGGCCTTTGGTGCTGTTGAATCACTATCTGAT |
| Microexon-tag Amino Acid Seq | FDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSD |
| Microexon-tag spanning region | 233913-234207 |
| Microexon-tag prediction score | 0.9787 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC09T0003800ZSx |
| Reference Transcript ID | BnaC09T0003800ZS |
| Gene ID | BnaC09G0003800ZS |
| Gene Name | NA |
| Transcript ID | BnaC09T0003800ZS |
| Protein ID | |
| Gene ID | BnaC09G0003800ZS |
| Gene Name | |
| Pfam domain motif | Peptidase_C1 |
| Motif E-value | 2.10E-65 |
| Motif start | 102 |
| Motif end | 334 |
| Protein seq | >BnaC09T0003800ZS MAADPTTKLCLVSVVLLLALVSSLQGVAADNLTKQKLNSKILQEEIVKKVNEHPNAGWKAALNDRFSNATVAEFKRLLGV KPTPKKLLLGVPVVSHDQSLKLPKSFDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSDRFCIQFGMNITLSVNDLLA CCGFRCGDGCDGGYPVAAWRYFSYSGVVTEECDPYFDQTGCSHPGCEPAYDTPKCMRKCVSGNQLWGESKHYSVSTYIVK SNPQDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGYNIGGHAVKLIGWGTTDDGEDYWLLANQWNRSWGDDGYFMI RRGTNECGIEDEPVGGLPSSKNVFKVITGSDEISVASV* |
| CDS seq | >BnaC09T0003800ZS ATGGCTGCTGATCCTACAACCAAACTCTGTTTGGTCTCTGTTGTCTTGCTCTTAGCTCTTGTCTCCTCCTTGCAGGGAGT TGCAGCAGACAATCTCACCAAACAGAAACTGAACTCGAAGATACTTCAGGAAGAGATAGTGAAGAAAGTCAACGAACATC CAAACGCTGGATGGAAAGCTGCTTTAAATGATCGTTTCTCTAACGCAACTGTTGCAGAGTTTAAGCGTCTCCTTGGTGTT AAACCAACACCTAAGAAGTTACTCTTAGGTGTTCCTGTTGTAAGCCATGATCAGTCTCTAAAGCTACCTAAATCATTCGA TGCTAGAACCGCTTGGCCTCAATGCACCAGCATTGGCAACATCTTAGATCAGGGACATTGTGGTTCTTGCTGGGCCTTTG GTGCTGTTGAATCACTATCTGATAGATTCTGTATCCAATTCGGAATGAACATTACTTTATCAGTAAATGATCTCTTAGCA TGTTGTGGATTCCGTTGTGGTGACGGTTGTGACGGTGGCTACCCTGTTGCTGCTTGGCGATACTTTTCTTACAGTGGTGT TGTCACTGAAGAGTGTGATCCGTACTTTGATCAAACCGGATGCTCTCACCCTGGTTGTGAACCTGCATATGATACACCGA AATGCATGAGGAAATGCGTTAGCGGAAACCAGTTATGGGGCGAGTCAAAGCATTACAGTGTTAGTACATACATTGTCAAG TCTAATCCACAAGACATCATGGCTGAGATTTACAAGAATGGACCTGTTGAAGTCTCTTTCACAGTTTATGAGGACTTTGC TCATTACAAATCTGGAGTGTACAAGCACATAACAGGTTATAACATTGGTGGTCATGCTGTTAAACTTATTGGTTGGGGAA CTACTGATGATGGAGAAGATTATTGGTTGTTGGCAAATCAGTGGAACAGAAGCTGGGGTGATGATGGTTATTTCATGATT AGGAGAGGGACAAATGAATGTGGAATTGAGGATGAACCAGTGGGTGGTTTGCCTTCAAGCAAGAATGTGTTCAAGGTTAT TACCGGTTCAGATGAGATTTCTGTTGCGTCGGTTTAA |
Bn_scaffoldC09:234081-234085:+ does not have available information here.