| Microexon ID | Bn_scaffoldA09:1309695-1309699:+ |
| Species | Brassica Napus | Coordinates | scaffoldA09:1309695..1309699 |
| Microexon Cluster ID | MEP08 |
| Size | 5 |
| Phase | 1 |
| Pfam Domain Motif | Peptidase_C1 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCAG |
| Microexon Amino Acid seq | DQ |
| Microexon-tag DNA Seq | TTCGATGCTAGAACCGCTTGGCCTCAGTGCACCAGCATTGGCAACATCTTAGATCAGGGACATTGTGGTTCTTGCTGGGCATTTGGTGCTGTTGAATCACTATCTGAT |
| Microexon-tag Amino Acid Seq | FDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSD |
| Microexon-tag spanning region | 1309533-1309822 |
| Microexon-tag prediction score | 0.9811 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA09T0020600ZSx |
| Reference Transcript ID | BnaA09T0020600ZS |
| Gene ID | BnaA09G0020600ZS |
| Gene Name | NA |
| Transcript ID | BnaA09T0020600ZS |
| Protein ID | |
| Gene ID | BnaA09G0020600ZS |
| Gene Name | |
| Pfam domain motif | Peptidase_C1 |
| Motif E-value | 1.40E-66 |
| Motif start | 102 |
| Motif end | 334 |
| Protein seq | >BnaA09T0020600ZS MAADSTTKLCLVSVVLLLGLVSSLQGVSADNLTKQKLNSKILQEEIVKKVNEHPNAGWKAALNDRFSNATVAEFKRLLGV KPTPKKLLLGVPVVSHDQSLKLPKSFDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSDRFCIQFGMNITLSVNDLLA CCGFRCGDGCDGGYPIAAWQYFSYSGVVTEECDPYFDQTGCSHPGCEPGYPTPKCMRKCVSGNQLWGESKHYSVSTYTVK SDPQDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGSNIGGHAVKLIGWGTTDDGEDYWLLANQWNRSWGDDGYFMI RRGTNECGIEDEPVGGLPSSKNVFKVITGSDEISVASV* |
| CDS seq | >BnaA09T0020600ZS ATGGCTGCTGATTCTACAACCAAACTCTGTTTGGTCTCTGTTGTCTTGCTCTTAGGCCTTGTCTCCTCCTTGCAGGGAGT TTCAGCAGACAATCTTACCAAACAGAAACTGAACTCCAAGATACTTCAGGAAGAGATAGTGAAGAAAGTCAACGAACATC CAAACGCTGGATGGAAAGCTGCTTTAAATGATCGTTTCTCTAACGCAACCGTTGCAGAGTTTAAGCGTCTCCTTGGGGTT AAACCAACACCTAAGAAGCTGCTCTTGGGTGTTCCTGTTGTAAGCCATGATCAGTCTCTAAAGCTACCTAAATCATTCGA TGCTAGAACCGCTTGGCCTCAGTGCACCAGCATTGGCAACATCTTAGATCAGGGACATTGTGGTTCTTGCTGGGCATTTG GTGCTGTTGAATCACTATCTGATAGATTCTGTATCCAATTCGGAATGAACATTACTTTATCAGTAAATGATCTTTTAGCT TGTTGTGGATTCCGTTGTGGTGATGGCTGTGACGGTGGCTACCCTATTGCTGCTTGGCAATACTTTTCCTACAGTGGTGT TGTCACTGAAGAGTGTGATCCATACTTTGATCAAACCGGATGCTCTCACCCTGGTTGTGAACCGGGGTATCCTACACCTA AATGCATGAGGAAATGCGTTAGCGGAAACCAGTTATGGGGCGAGTCTAAACATTACAGTGTTAGTACATACACTGTCAAG TCTGATCCACAAGACATCATGGCTGAGATTTACAAGAATGGACCTGTTGAAGTCTCTTTCACAGTTTATGAGGACTTTGC TCATTACAAATCTGGAGTGTACAAGCACATAACAGGTTCTAACATTGGAGGTCATGCTGTGAAACTTATTGGTTGGGGAA CTACTGATGATGGAGAAGATTATTGGTTGTTGGCTAATCAATGGAACAGAAGCTGGGGTGATGATGGTTATTTCATGATT AGGAGAGGAACAAATGAATGTGGAATTGAAGATGAACCAGTGGGTGGTTTGCCTTCAAGCAAGAATGTGTTCAAGGTTAT TACCGGTTCAGATGAAATTTCTGTTGCGTCGGTTTAA |
Bn_scaffoldA09:1309695-1309699:+ does not have available information here.