
Microexon ID | At_4:695701-695705:+ |
Species | Arabidopsis thaliana | Coordinates | 4:695701..695705 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCTAGAACTGCTTGGCCACAGTGCACTAGTATTGGAAACATCTTAGATCAGGGACATTGTGGTTCTTGCTGGGCATTTGGTGCTGTTGAATCACTATCAGAT |
Microexon-tag Amino Acid Seq | FDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSD |
Microexon-tag spanning region | 695543-695845 |
Microexon-tag prediction score | 0.9769 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT4G01610.1x |
Reference Transcript ID | AT4G01610.1 |
Gene ID | AT4G01610 |
Gene Name | CATHB3 |
Transcript ID | AT4G01610.1 |
Protein ID | AT4G01610.1 |
Gene ID | AT4G01610 |
Gene Name | CATHB3 |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 8.2e-67 |
Motif start | 103 |
Motif end | 337 |
Protein seq | >AT4G01610.1 MAVYNTKLCLASVFLLLGLLLAFDLKGIEAESLTKQKLDSKILQDEIVKKVNENPNAGWKAAINDRFSNATVAEFKRLLG VKPTPKKHFLGVPIVSHDPSLKLPKAFDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSDRFCIQFGMNISLSVNDLL ACCGFRCGDGCDGGYPIAAWQYFSYSGVVTEECDPYFDNTGCSHPGCEPAYPTPKCSRKCVSDNKLWSESKHYSVSTYTV KSNPQDIMAEVYKNGPVEVSFTVYEDFAHYKSGVYKHITGSNIGGHAVKLIGWGTSSEGEDYWLMANQWNRGWGDDGYFM IRRGTNECGIEDEPVAGLPSSKNVFRVDTGSNDLPVASV* |
CDS seq | >AT4G01610.1 ATGGCTGTTTACAATACCAAACTCTGTTTGGCCTCTGTTTTCTTGCTCTTAGGGCTTCTCTTGGCTTTTGACTTGAAGGG TATAGAAGCAGAAAGTCTTACCAAACAGAAACTGGACTCGAAGATACTTCAGGATGAGATTGTGAAGAAAGTCAACGAAA ACCCAAACGCTGGATGGAAAGCTGCTATAAATGATCGATTTTCAAACGCCACTGTTGCAGAGTTTAAGCGTCTTCTCGGT GTTAAACCAACACCAAAGAAGCATTTCTTAGGTGTTCCTATTGTGAGCCATGATCCATCTTTGAAGCTACCTAAAGCTTT TGATGCTAGAACTGCTTGGCCACAGTGCACTAGTATTGGAAACATCTTAGATCAGGGACATTGTGGTTCTTGCTGGGCAT TTGGTGCTGTTGAATCACTATCAGATAGATTCTGTATCCAATTTGGCATGAACATTTCTTTATCAGTAAATGATCTCCTA GCTTGTTGTGGATTCCGTTGTGGTGATGGTTGTGACGGTGGCTATCCAATTGCTGCTTGGCAATACTTTTCGTATAGCGG TGTTGTCACAGAAGAGTGTGATCCATACTTTGATAATACCGGATGCTCTCACCCGGGTTGCGAACCGGCATATCCTACAC CGAAATGTTCGAGGAAATGCGTTAGCGACAACAAACTATGGAGCGAGTCGAAGCATTACAGTGTTAGTACATACACTGTG AAATCTAATCCACAAGATATCATGGCAGAGGTTTATAAGAATGGACCTGTTGAAGTCTCTTTTACCGTTTATGAGGATTT TGCTCATTACAAATCTGGAGTCTATAAGCACATAACAGGTTCTAACATTGGAGGTCATGCTGTTAAACTTATTGGTTGGG GAACTAGCAGTGAAGGAGAAGATTATTGGTTGATGGCAAATCAATGGAACAGAGGCTGGGGTGATGATGGTTATTTCATG ATAAGGAGAGGAACTAATGAATGTGGAATTGAAGATGAACCAGTAGCTGGTTTGCCTTCAAGCAAGAATGTGTTTAGGGT TGATACCGGTTCGAATGATCTTCCGGTTGCATCGGTTTAA |
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCTAGAACTGCTTGGCCACAGTGCACTAGTATTGGAAACATCTTAGATCAGGGACATTGTGGTTCTTGCTGGGCATTTGGTGCTGTTGAATCACTATCAGAT |
Microexon-tag Amino Acid seq | FDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSD |
Transcript ID | AT4G01610.1 |
Gene ID | At.17637 |
Gene Name | CATHB3 |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 8.3e-67 |
Motif start | 103 |
Motif end | 337 |
Protein seq | >AT4G01610.1 MAVYNTKLCLASVFLLLGLLLAFDLKGIEAESLTKQKLDSKILQDEIVKKVNENPNAGWKAAINDRFSNATVAEFKRLLG VKPTPKKHFLGVPIVSHDPSLKLPKAFDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSDRFCIQFGMNISLSVNDLL ACCGFRCGDGCDGGYPIAAWQYFSYSGVVTEECDPYFDNTGCSHPGCEPAYPTPKCSRKCVSDNKLWSESKHYSVSTYTV KSNPQDIMAEVYKNGPVEVSFTVYEDFAHYKSGVYKHITGSNIGGHAVKLIGWGTSSEGEDYWLMANQWNRGWGDDGYFM IRRGTNECGIEDEPVAGLPSSKNVFRVDTGSNDLPVASV* |
CDS seq | >AT4G01610.1 ATGGCTGTTTACAATACCAAACTCTGTTTGGCCTCTGTTTTCTTGCTCTTAGGGCTTCTCTTGGCTTTTGACTTGAAGGG TATAGAAGCAGAAAGTCTTACCAAACAGAAACTGGACTCGAAGATACTTCAGGATGAGATTGTGAAGAAAGTCAACGAAA ACCCAAACGCTGGATGGAAAGCTGCTATAAATGATCGATTTTCAAACGCCACTGTTGCAGAGTTTAAGCGTCTTCTCGGT GTTAAACCAACACCAAAGAAGCATTTCTTAGGTGTTCCTATTGTGAGCCATGATCCATCTTTGAAGCTACCTAAAGCTTT TGATGCTAGAACTGCTTGGCCACAGTGCACTAGTATTGGAAACATCTTAGATCAGGGACATTGTGGTTCTTGCTGGGCAT TTGGTGCTGTTGAATCACTATCAGATAGATTCTGTATCCAATTTGGCATGAACATTTCTTTATCAGTAAATGATCTCCTA GCTTGTTGTGGATTCCGTTGTGGTGATGGTTGTGACGGTGGCTATCCAATTGCTGCTTGGCAATACTTTTCGTATAGCGG TGTTGTCACAGAAGAGTGTGATCCATACTTTGATAATACCGGATGCTCTCACCCGGGTTGCGAACCGGCATATCCTACAC CGAAATGTTCGAGGAAATGCGTTAGCGACAACAAACTATGGAGCGAGTCGAAGCATTACAGTGTTAGTACATACACTGTG AAATCTAATCCACAAGATATCATGGCAGAGGTTTATAAGAATGGACCTGTTGAAGTCTCTTTTACCGTTTATGAGGATTT TGCTCATTACAAATCTGGAGTCTATAAGCACATAACAGGTTCTAACATTGGAGGTCATGCTGTTAAACTTATTGGTTGGG GAACTAGCAGTGAAGGAGAAGATTATTGGTTGATGGCAAATCAATGGAACAGAGGCTGGGGTGATGATGGTTATTTCATG ATAAGGAGAGGAACTAATGAATGTGGAATTGAAGATGAACCAGTAGCTGGTTTGCCTTCAAGCAAGAATGTGTTTAGGGT TGATACCGGTTCGAATGATCTTCCGGTTGCATCGGTTTAA |