
Microexon ID | At_1:456757-456761:+ |
Species | Arabidopsis thaliana | Coordinates | 1:456757..456761 |
Microexon Cluster ID | MEP08 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_C1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 52,5,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYGAYGCWMGAACWGMTTGGYCTCADTGYASCACHATTGGRARMATWCTWGATCARGGWCAYTGTGGTTCTTGYTGGGCWTTTGGTGCTGTKGARKCACTRYCWGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCTAGAACCGCTTGGTCACAGTGCACCAGTATTGGAAGGATCTTAGATCAGGGTCACTGTGGTTCTTGCTGGGCCTTTGGTGCTGTTGAATCACTGTCTGAC |
Microexon-tag Amino Acid Seq | FDARTAWSQCTSIGRILDQGHCGSCWAFGAVESLSD |
Microexon-tag spanning region | 456595-456893 |
Microexon-tag prediction score | 0.9797 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G02305.1x |
Reference Transcript ID | AT1G02305.1 |
Gene ID | AT1G02305 |
Gene Name | CATHB2 |
Transcript ID | AT1G02305.1 |
Protein ID | AT1G02305.1 |
Gene ID | AT1G02305 |
Gene Name | CATHB2 |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 4.5e-68 |
Motif start | 106 |
Motif end | 340 |
Protein seq | >AT1G02305.1 MADNCIRLLHSASVFFCLGLLISSFNLLQGIAAENLSKQKLTSWILQNEIVKEVNENPNAGWKASFNDRFANATVAEFKR LLGVKPTPKTEFLGVPIVSHDISLKLPKEFDARTAWSQCTSIGRILDQGHCGSCWAFGAVESLSDRFCIKYNMNVSLSVN DLLACCGFLCGQGCNGGYPIAAWRYFKHHGVVTEECDPYFDNTGCSHPGCEPAYPTPKCARKCVSGNQLWRESKHYGVSA YKVRSHPDDIMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGTNIGGHAVKLIGWGTSDDGEDYWLLANQWNRSWGDDG YFKIRRGTNECGIEHGVVAGLPSDRNVVKGITTSDDLLVSSF* |
CDS seq | >AT1G02305.1 ATGGCTGATAATTGTATCAGACTTCTTCACTCAGCCTCTGTTTTCTTCTGTTTAGGGCTTCTAATTTCATCCTTCAACTT GTTGCAGGGTATTGCAGCTGAAAATCTTTCCAAGCAGAAACTGACCTCATGGATTCTTCAGAATGAGATTGTAAAGGAAG TCAATGAGAATCCAAACGCTGGATGGAAAGCTTCTTTCAATGATCGGTTTGCAAACGCCACTGTTGCAGAGTTTAAGCGC CTTCTTGGTGTTAAACCAACACCAAAGACGGAATTTTTGGGTGTGCCTATTGTAAGCCATGATATATCTTTGAAGCTTCC AAAAGAATTTGATGCTAGAACCGCTTGGTCACAGTGCACCAGTATTGGAAGGATCTTAGATCAGGGTCACTGTGGTTCTT GCTGGGCCTTTGGTGCTGTTGAATCACTGTCTGACAGATTCTGCATCAAATATAACATGAATGTTTCTTTATCTGTCAAT GATCTTTTAGCATGTTGTGGATTCCTTTGCGGTCAAGGTTGTAATGGTGGATACCCAATTGCTGCGTGGCGGTACTTTAA GCACCACGGTGTAGTCACTGAAGAGTGTGATCCATACTTCGACAATACTGGTTGCTCGCACCCGGGATGTGAACCCGCTT ACCCTACACCAAAATGTGCAAGGAAATGTGTTAGCGGAAACCAGCTTTGGCGTGAATCAAAACATTATGGTGTTAGTGCG TACAAGGTCAGATCTCACCCTGATGACATTATGGCAGAAGTTTACAAAAATGGACCTGTTGAGGTTGCCTTCACTGTTTA CGAGGACTTTGCGCATTACAAATCTGGAGTGTACAAGCACATAACAGGTACTAACATTGGAGGTCATGCTGTTAAACTTA TTGGCTGGGGAACTTCTGATGACGGTGAAGATTATTGGTTGCTTGCAAATCAATGGAACCGAAGCTGGGGTGATGATGGG TACTTCAAGATCAGGAGAGGAACAAACGAATGTGGCATTGAACATGGTGTTGTAGCTGGTTTACCTTCAGACAGGAACGT AGTTAAAGGTATTACTACTTCAGATGATCTTCTTGTTTCCTCATTTTAA |
Microexon DNA seq | ATCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | TTTGATGCTAGAACCGCTTGGTCACAGTGCACCAGTATTGGAAGGATCTTAGATCAGGGTCACTGTGGTTCTTGCTGGGCCTTTGGTGCTGTTGAATCACTGTCTGAC |
Microexon-tag Amino Acid seq | FDARTAWSQCTSIGRILDQGHCGSCWAFGAVESLSD |
Transcript ID | At.139.2 |
Gene ID | At.139 |
Gene Name | CATHB2 |
Pfam domain motif | Peptidase_C1 |
Motif E-value | 4.5e-68 |
Motif start | 103 |
Motif end | 337 |
Protein seq | >At.139.2 MADSCCIRLHLLASVFLLLFSSFNLQGIAAENLSKQKLTSLILQNEIVKEVNENPNAGWKASFNDRFANATVAEFKRLLG VKPTPKTEFLGVPIVSHDISLKLPKEFDARTAWSQCTSIGRILDQGHCGSCWAFGAVESLSDRFCIKYNMNVSLSVNDLL ACCGFLCGQGCNGGYPIAAWRYFKHHGVVTEECDPYFDNTGCSHPGCEPAYPTPKCARKCVSGNQLWRESKHYGVSAYKV RSHPDDIMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGTNIGGHAVKLIGWGTSDDGEDYWLLANQWNRSWGDDGYFK IRRGTNECGIEHGVVAGLPSDRNVVKGITTSDDLLVSSF* |
CDS seq | >At.139.2 ATGGCTGATAGTTGTTGTATCAGACTTCACTTATTAGCCTCTGTTTTCTTGCTCTTATTTTCATCCTTCAACTTGCAGGG TATTGCAGCGGAAAATCTTTCCAAGCAGAAACTGACCTCACTGATTCTTCAGAATGAGATTGTAAAGGAAGTCAATGAGA ATCCAAACGCTGGATGGAAAGCTTCTTTCAATGATCGGTTTGCAAACGCCACTGTTGCAGAGTTTAAGCGCCTTCTTGGT GTTAAACCAACACCAAAGACGGAATTTTTGGGTGTGCCTATTGTAAGCCATGATATATCTTTGAAGCTTCCAAAAGAATT TGATGCTAGAACCGCTTGGTCACAGTGCACCAGTATTGGAAGGATCTTAGATCAGGGTCACTGTGGTTCTTGCTGGGCCT TTGGTGCTGTTGAATCACTGTCTGACAGATTCTGCATCAAATATAACATGAATGTTTCTTTATCTGTCAATGATCTTTTA GCATGTTGTGGATTCCTTTGCGGTCAAGGTTGTAATGGTGGATACCCAATTGCTGCGTGGCGGTACTTTAAGCACCACGG TGTAGTCACTGAAGAGTGTGATCCATACTTCGACAATACTGGTTGCTCGCACCCGGGATGTGAACCCGCTTACCCTACAC CAAAATGTGCAAGGAAATGTGTTAGCGGAAACCAGCTTTGGCGTGAATCAAAACATTATGGTGTTAGTGCGTACAAGGTC AGATCTCACCCTGATGACATTATGGCAGAAGTTTACAAAAATGGACCTGTTGAGGTTGCCTTCACTGTTTACGAGGACTT TGCGCATTACAAATCTGGAGTGTACAAGCACATAACAGGTACTAACATTGGAGGTCATGCTGTTAAACTTATTGGCTGGG GAACTTCTGATGACGGTGAAGATTATTGGTTGCTTGCAAATCAATGGAACCGAAGCTGGGGTGATGATGGGTACTTCAAG ATCAGGAGAGGAACAAACGAATGTGGCATTGAACATGGTGTTGTAGCTGGTTTACCTTCAGACAGGAACGTAGTTAAAGG TATTACTACTTCAGATGATCTTCTTGTTTCCTCATTTTAA |