
Microexon ID | Vv_2:2803961-2803965:+ |
Species | Vistis vinifera | Coordinates | 2:2803961..2803965 |
Microexon Cluster ID | MEP07 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 33,19,5,12,39 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GCWCAYCCTGTTCGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCACG |
Microexon Amino Acid seq | VT |
Microexon-tag DNA Seq | GCACATCCTGTACGGCCACATTCTTACATCAAGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGA |
Microexon-tag Amino Acid Seq | AHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLG |
Microexon-tag spanning region | 2803637-2804218 |
Microexon-tag prediction score | 0.9913 |
Overlapped with the annotated transcript (%) | 38.81 |
New Transcript ID | VIT_02s0025g03270.t01x |
Reference Transcript ID | VIT_02s0025g03270.t01 |
Gene ID | VIT_02s0025g03270 |
Gene Name | NA |
Vv_2:2803961-2803965:+ does not have available information here.
Microexon DNA seq | TCACG |
Microexon Amino Acid seq | VT |
Microexon-tag DNA Seq | GCACATCCTGTACGGCCACATTCTTACATCAAGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGA |
Microexon-tag Amino Acid seq | AHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLG |
Transcript ID | Vv.19881.1 |
Gene ID | Vv.19881 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 3.4e-50 |
Motif start | 230 |
Motif end | 439 |
Protein seq | >Vv.19881.1 MDMPKEIFLKDYKLPDYYFDTMDLNFLLGEEKTTVYSKITVLPRVEGSPFPLVLDGVDLKLVSVKVNSKELKEEDYVLSP RHLTLPSLPSGEFTLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRIEGDKSLYPVLLS NGNLIEHGDLEGGKHYAIWEDPFKKPCYLFALVAGQLESRDDTFVTRSGRTVSLRIWTPAQDVPRTVHAMYSLKAAMKWD EDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLS LKEGLTVFRDQEFSSDMGSRTVKRIADVSRLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGS QGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPLVKVTSSYNAEAHTYSLKFSQEVPPTPGQPV KEPMFIPVAVGFLDSTGKEMPLSSVYHDGTLQSVVSNDQPTYTTVLRVTKKEEEFLFSDISEKPIASLLRGYSAPIRLDT DLTDSDLFFLLAHDSDEFNRWEAGQVLARKLMLGLVADFQQNRPLVLNPKFVHGLKSILLDSSLDKEFIAKAITLPGEGE IMDIMEVADPDAVHAVRSFIRKQLASELRAELLSTVEKNRSSEDYVFNHPNMARRALKNVALGYLALLDDPELTELALHE YRTAANMTEQFAALAAIAQIPGKTRDDVLADFYSKWQQDFLVVNKWFALQAMADIPQNVENVRNLLNHPAFDLRNPNKVY SLIGGFCGSPVNFHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWKRYDDTRKSLAKAQLEMIVACNGLSENVYEI ASKSLAA* |
CDS seq | >Vv.19881.1 ATGGATATGCCAAAAGAAATCTTCCTGAAGGATTACAAGCTTCCTGATTACTACTTTGATACGATGGATTTGAATTTTTT GTTGGGTGAGGAGAAAACAACTGTCTATTCAAAAATAACTGTCTTACCCAGAGTTGAAGGTTCTCCTTTCCCACTGGTAT TGGATGGGGTAGATCTGAAGCTTGTTTCAGTAAAGGTCAACAGCAAGGAACTTAAGGAAGAAGATTACGTCCTGAGCCCC CGCCATCTGACACTTCCATCACTTCCAAGTGGTGAATTTACTCTGGAAATTGTTACTGAGATATGTCCACAAAAGAACAC ATCATTAGAGGGCCTTTACAAGTCATCTGGGAATTTCTGTACACAATGTGAAGCAGAGGGTTTCCGAAAAATTACATTCT ATCAGGATCGCCCTGATATTATGGCAAAATACACATGCCGCATTGAAGGTGATAAGTCATTATACCCGGTATTGTTGTCT AATGGAAATCTCATAGAGCATGGAGACCTTGAGGGTGGCAAACACTATGCCATTTGGGAGGACCCCTTCAAGAAACCTTG TTACTTATTTGCTTTAGTTGCTGGACAGTTGGAAAGCAGAGATGACACTTTTGTTACCCGTTCAGGCCGAACTGTATCCT TGAGGATCTGGACCCCAGCACAAGATGTACCCAGGACTGTCCATGCCATGTATTCCCTTAAAGCAGCCATGAAATGGGAT GAGGATGTTTTTGGTCTTGAGTATGACCTGGATCTGTTCAATATTGTGGCAGTTCCAGATTTTAACATGGGAGCCATGGA AAACAAAAGTTTGAATATTTTCAATTCCAAGCTTGTCTTGGCATCTCCAGAAACTGCTACGGATGCAGATTATGCAGCAA TTTTGGGAGTTATTGGTCATGAGTATTTCCACAACTGGACTGGTAACAGAGTGACATGTCGTGACTGGTTCCAGCTCAGC TTAAAGGAAGGTCTTACAGTTTTCCGTGATCAGGAATTTTCATCTGACATGGGAAGCCGCACAGTAAAGCGAATTGCTGA TGTTTCAAGGCTTCGAAATTATCAATTTCCACAGGATGCTGGTCCGATGGCACATCCTGTACGGCCACATTCTTACATCA AGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGAAGT CAAGGATTCCGAAAAGGCATGGATCTTTATTTTAAGAGGCATGATGGGCAAGCTGTAACCTGTGAAGATTTCTTTGCTGC CATGAGAGATGCAAATGATGCAGATTTTGCTAATTTCTTGTTGTGGTACTCCCAAGCTGGTACGCCTCTCGTGAAGGTTA CTTCTTCCTACAATGCTGAAGCCCATACTTACTCTTTGAAGTTTAGTCAAGAGGTTCCACCAACTCCAGGACAGCCAGTG AAAGAACCAATGTTCATTCCTGTTGCAGTAGGTTTCCTGGACTCAACTGGCAAGGAGATGCCCCTCTCATCTGTGTATCA TGATGGGACTTTGCAGTCTGTTGTGAGCAATGATCAGCCAACTTACACTACAGTTCTTCGAGTAACAAAGAAAGAAGAAG AATTTTTGTTCTCTGATATATCTGAGAAGCCAATTGCATCTCTTTTGCGGGGCTACAGTGCTCCTATTCGTCTGGACACT GATCTCACGGACAGCGATTTGTTTTTCCTTCTTGCTCATGATTCAGATGAGTTCAACCGTTGGGAGGCTGGGCAGGTGTT GGCAAGGAAGCTGATGCTTGGTTTAGTGGCTGATTTCCAACAAAATAGACCATTGGTTCTGAATCCAAAGTTTGTGCATG GGCTCAAAAGCATACTTCTTGACTCAAGCTTGGATAAAGAATTCATTGCAAAGGCAATAACACTGCCGGGTGAAGGGGAG ATCATGGACATTATGGAAGTTGCCGATCCTGATGCAGTGCATGCTGTTCGATCTTTCATCAGGAAGCAGCTGGCGTCTGA ACTGAGAGCAGAGCTCCTTAGCACAGTTGAAAAGAATAGGAGCTCGGAGGATTATGTGTTTAACCATCCTAATATGGCTA GACGTGCACTGAAGAATGTTGCCCTTGGATATCTTGCATTATTGGATGATCCAGAACTCACCGAGCTTGCATTGCACGAA TATAGAACTGCTGCAAATATGACTGAACAGTTTGCAGCTCTGGCTGCCATAGCCCAGATCCCTGGTAAGACCCGTGATGA TGTATTGGCTGACTTCTACAGCAAGTGGCAGCAAGACTTTTTGGTTGTCAATAAATGGTTTGCCCTTCAAGCCATGGCAG ACATTCCTCAGAATGTTGAGAATGTTCGTAACCTCTTAAACCATCCAGCTTTTGACTTACGTAATCCAAACAAGGTATAC TCGCTGATTGGAGGATTCTGTGGATCTCCTGTGAATTTCCACGCAAAGGACGGGTCAGGCTATAAGTTCTTGGGAGAAAT GGTGGTGCAACTGGATAAGATCAACCCTCAGGTGGCCTCTCGCATGGTGTCTGCCTTCTCAAGATGGAAGCGTTATGATG ATACTCGGAAAAGCCTTGCGAAGGCACAGTTGGAGATGATAGTAGCCTGCAATGGACTGTCTGAGAATGTGTATGAAATT GCCTCCAAAAGCTTAGCTGCTTAA |