Microexon ID Vv_2:2803961-2803965:+
Species Vistis vinifera
Coordinates 2:2803961..2803965
Microexon Cluster ID MEP07
Size 5
Phase 1
Pfam Domain Motif Peptidase_M1
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 33,19,5,12,39
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq GCWCAYCCTGTTCGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCACG
Microexon Amino Acid seq VT
Microexon-tag DNA Seq GCACATCCTGTACGGCCACATTCTTACATCAAGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGA
Microexon-tag Amino Acid Seq AHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLG
Microexon-tag spanning region2803637-2804218
Microexon-tag prediction score0.9913
Overlapped with the annotated transcript (%) 38.81
New Transcript ID VIT_02s0025g03270.t01x
Reference Transcript ID VIT_02s0025g03270.t01
Gene ID VIT_02s0025g03270
Gene Name NA
Vv_2:2803961-2803965:+ does not have available information here.
Microexon DNA seq TCACG
Microexon Amino Acid seq VT
Microexon-tag DNA Seq GCACATCCTGTACGGCCACATTCTTACATCAAGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGA
Microexon-tag Amino Acid seq AHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLG
Transcript ID Vv.19881.1
Gene ID Vv.19881
Gene Name NA
Pfam domain motif Peptidase_M1
Motif E-value 3.4e-50
Motif start 230
Motif end 439
Protein seq >Vv.19881.1
MDMPKEIFLKDYKLPDYYFDTMDLNFLLGEEKTTVYSKITVLPRVEGSPFPLVLDGVDLKLVSVKVNSKELKEEDYVLSP
RHLTLPSLPSGEFTLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRIEGDKSLYPVLLS
NGNLIEHGDLEGGKHYAIWEDPFKKPCYLFALVAGQLESRDDTFVTRSGRTVSLRIWTPAQDVPRTVHAMYSLKAAMKWD
EDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLS
LKEGLTVFRDQEFSSDMGSRTVKRIADVSRLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGS
QGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPLVKVTSSYNAEAHTYSLKFSQEVPPTPGQPV
KEPMFIPVAVGFLDSTGKEMPLSSVYHDGTLQSVVSNDQPTYTTVLRVTKKEEEFLFSDISEKPIASLLRGYSAPIRLDT
DLTDSDLFFLLAHDSDEFNRWEAGQVLARKLMLGLVADFQQNRPLVLNPKFVHGLKSILLDSSLDKEFIAKAITLPGEGE
IMDIMEVADPDAVHAVRSFIRKQLASELRAELLSTVEKNRSSEDYVFNHPNMARRALKNVALGYLALLDDPELTELALHE
YRTAANMTEQFAALAAIAQIPGKTRDDVLADFYSKWQQDFLVVNKWFALQAMADIPQNVENVRNLLNHPAFDLRNPNKVY
SLIGGFCGSPVNFHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWKRYDDTRKSLAKAQLEMIVACNGLSENVYEI
ASKSLAA*
CDS seq >Vv.19881.1
ATGGATATGCCAAAAGAAATCTTCCTGAAGGATTACAAGCTTCCTGATTACTACTTTGATACGATGGATTTGAATTTTTT
GTTGGGTGAGGAGAAAACAACTGTCTATTCAAAAATAACTGTCTTACCCAGAGTTGAAGGTTCTCCTTTCCCACTGGTAT
TGGATGGGGTAGATCTGAAGCTTGTTTCAGTAAAGGTCAACAGCAAGGAACTTAAGGAAGAAGATTACGTCCTGAGCCCC
CGCCATCTGACACTTCCATCACTTCCAAGTGGTGAATTTACTCTGGAAATTGTTACTGAGATATGTCCACAAAAGAACAC
ATCATTAGAGGGCCTTTACAAGTCATCTGGGAATTTCTGTACACAATGTGAAGCAGAGGGTTTCCGAAAAATTACATTCT
ATCAGGATCGCCCTGATATTATGGCAAAATACACATGCCGCATTGAAGGTGATAAGTCATTATACCCGGTATTGTTGTCT
AATGGAAATCTCATAGAGCATGGAGACCTTGAGGGTGGCAAACACTATGCCATTTGGGAGGACCCCTTCAAGAAACCTTG
TTACTTATTTGCTTTAGTTGCTGGACAGTTGGAAAGCAGAGATGACACTTTTGTTACCCGTTCAGGCCGAACTGTATCCT
TGAGGATCTGGACCCCAGCACAAGATGTACCCAGGACTGTCCATGCCATGTATTCCCTTAAAGCAGCCATGAAATGGGAT
GAGGATGTTTTTGGTCTTGAGTATGACCTGGATCTGTTCAATATTGTGGCAGTTCCAGATTTTAACATGGGAGCCATGGA
AAACAAAAGTTTGAATATTTTCAATTCCAAGCTTGTCTTGGCATCTCCAGAAACTGCTACGGATGCAGATTATGCAGCAA
TTTTGGGAGTTATTGGTCATGAGTATTTCCACAACTGGACTGGTAACAGAGTGACATGTCGTGACTGGTTCCAGCTCAGC
TTAAAGGAAGGTCTTACAGTTTTCCGTGATCAGGAATTTTCATCTGACATGGGAAGCCGCACAGTAAAGCGAATTGCTGA
TGTTTCAAGGCTTCGAAATTATCAATTTCCACAGGATGCTGGTCCGATGGCACATCCTGTACGGCCACATTCTTACATCA
AGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGAAGT
CAAGGATTCCGAAAAGGCATGGATCTTTATTTTAAGAGGCATGATGGGCAAGCTGTAACCTGTGAAGATTTCTTTGCTGC
CATGAGAGATGCAAATGATGCAGATTTTGCTAATTTCTTGTTGTGGTACTCCCAAGCTGGTACGCCTCTCGTGAAGGTTA
CTTCTTCCTACAATGCTGAAGCCCATACTTACTCTTTGAAGTTTAGTCAAGAGGTTCCACCAACTCCAGGACAGCCAGTG
AAAGAACCAATGTTCATTCCTGTTGCAGTAGGTTTCCTGGACTCAACTGGCAAGGAGATGCCCCTCTCATCTGTGTATCA
TGATGGGACTTTGCAGTCTGTTGTGAGCAATGATCAGCCAACTTACACTACAGTTCTTCGAGTAACAAAGAAAGAAGAAG
AATTTTTGTTCTCTGATATATCTGAGAAGCCAATTGCATCTCTTTTGCGGGGCTACAGTGCTCCTATTCGTCTGGACACT
GATCTCACGGACAGCGATTTGTTTTTCCTTCTTGCTCATGATTCAGATGAGTTCAACCGTTGGGAGGCTGGGCAGGTGTT
GGCAAGGAAGCTGATGCTTGGTTTAGTGGCTGATTTCCAACAAAATAGACCATTGGTTCTGAATCCAAAGTTTGTGCATG
GGCTCAAAAGCATACTTCTTGACTCAAGCTTGGATAAAGAATTCATTGCAAAGGCAATAACACTGCCGGGTGAAGGGGAG
ATCATGGACATTATGGAAGTTGCCGATCCTGATGCAGTGCATGCTGTTCGATCTTTCATCAGGAAGCAGCTGGCGTCTGA
ACTGAGAGCAGAGCTCCTTAGCACAGTTGAAAAGAATAGGAGCTCGGAGGATTATGTGTTTAACCATCCTAATATGGCTA
GACGTGCACTGAAGAATGTTGCCCTTGGATATCTTGCATTATTGGATGATCCAGAACTCACCGAGCTTGCATTGCACGAA
TATAGAACTGCTGCAAATATGACTGAACAGTTTGCAGCTCTGGCTGCCATAGCCCAGATCCCTGGTAAGACCCGTGATGA
TGTATTGGCTGACTTCTACAGCAAGTGGCAGCAAGACTTTTTGGTTGTCAATAAATGGTTTGCCCTTCAAGCCATGGCAG
ACATTCCTCAGAATGTTGAGAATGTTCGTAACCTCTTAAACCATCCAGCTTTTGACTTACGTAATCCAAACAAGGTATAC
TCGCTGATTGGAGGATTCTGTGGATCTCCTGTGAATTTCCACGCAAAGGACGGGTCAGGCTATAAGTTCTTGGGAGAAAT
GGTGGTGCAACTGGATAAGATCAACCCTCAGGTGGCCTCTCGCATGGTGTCTGCCTTCTCAAGATGGAAGCGTTATGATG
ATACTCGGAAAAGCCTTGCGAAGGCACAGTTGGAGATGATAGTAGCCTGCAATGGACTGTCTGAGAATGTGTATGAAATT
GCCTCCAAAAGCTTAGCTGCTTAA