
Microexon ID | Ta_5B:306433040-306433044:+ |
Species | Triticum Aestivum | Coordinates | 5B:306433040..306433044 |
Microexon Cluster ID | MEP07 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 33,19,5,12,39 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GCWCAYCCTGTTCGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCACG |
Microexon Amino Acid seq | VT |
Microexon-tag DNA Seq | GCACATCCTATTCGCCCCCTTTCATATATCAAGATGGACAACTTCTATACCGTCACGGTTTACGAAAAGGGTGCTGAAGTCGTCAGGATGTACAAGACAATGTTTGGA |
Microexon-tag Amino Acid Seq | AHPIRPLSYIKMDNFYTVTVYEKGAEVVRMYKTMFG |
Microexon-tag spanning region | 306432745-306433290 |
Microexon-tag prediction score | 0.9734 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G165300.1x |
Reference Transcript ID | TraesCS5B02G165300.1 |
Gene ID | TraesCS5B02G165300 |
Gene Name | NA |
Transcript ID | TraesCS5B02G165300.1 |
Protein ID | |
Gene ID | TraesCS5B02G165300 |
Gene Name | |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 4.90E-50 |
Motif start | 330 |
Motif end | 541 |
Protein seq | >TraesCS5B02G165300.1 MARCLIRPAAAYQGCGLVKAGFLGVVSPLHYQRLPYSSSKRGSPGNKYSGCLANLKKEGSHWTGTRSNLLLSLHSSKFVS KRTACLIATGPSPAATEEPEMDLPKEIFLKDYKKPDYLFDTVDLEFQLGDEKTMVTSKIAVSPGNEGTSSPLALHGCDLK LLSIKINGTELKSDKYTVDPRHLTILTPPAGVFNMEIVTEIYPQLNTSLEGLYRSTGNFCTQCEAEGFRKITYFQDRPDV MAKYTCRIEGDKTLYPVLLSNGNLIEQGDLEGGKHYALWEDPFKKPCYLFALVAGQLECREDSFVTCSGRKVTLRIWTPA QDLPKTSHAMYSLKEAMKWDEEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNVFQSRLVLASPEAATDGDYAAILGVIGH EYFHNWTGNRVTCRDWFQLTLKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRSYQFPQDAGPMAHPIRPLSYIKMDNFYT VTVYEKGAEVVRMYKTMFGASGFRKGMDLYFQRHDGQAVTCEDFYAAMCDANNAHLPNFLQWYSQAGTPTVKVTSSYDEG SQAFSLKLSQEVPPTPGQLMKEPMFIPVAVGLVDSIGKDMPLTSIYSDGMVQTLSNDGHPIFTTVLQFKKKEEEFIFNNV PERPVPSLLRGYSAPIRLDSDLTESDLYFLLANDSDEFNRWEAGQILARKLMFSLVADFQQQKTLALNTKFVDGLRAILR STSLDKEFIAKAITLPGQGEIMDMMSIADPDAVHAVRTFIKKELAFQLKDDLLAAVTSNRSSEAYAFNHDSMARRALKNT CLAYLASLNEPDVTELALNEYKSATNMTEQFAALAALSQNPGQVREDALLDFYNKWQQDYLVVSKWFALQATSDIPGNVA NVQKLLAHPAFDMRNPNKVYSLIGGFCGSPVSFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRWRRYDETRQALA KAQLEMIISANGLSENVYEIALKSLAA* |
CDS seq | >TraesCS5B02G165300.1 ATGGCTCGTTGTCTCATTAGGCCCGCCGCGGCGTACCAAGGTTGCGGTTTGGTTAAGGCTGGGTTTCTGGGCGTGGTCTC CCCTCTCCATTATCAAAGATTGCCTTACTCCTCTTCAAAGAGAGGTTCCCCAGGGAATAAGTACTCTGGCTGCCTCGCTA ATTTAAAAAAGGAGGGTTCACACTGGACAGGAACAAGGTCCAATCTTTTGTTGTCGTTACATAGTTCAAAGTTTGTCAGC AAGAGGACAGCTTGTTTGATTGCAACAGGGCCATCTCCTGCTGCAACTGAAGAACCAGAGATGGACCTTCCAAAGGAGAT ATTCTTGAAAGACTACAAAAAACCTGACTACTTGTTTGACACGGTGGATTTAGAATTTCAACTTGGTGATGAAAAGACCA TGGTTACTTCTAAAATAGCTGTATCCCCAGGCAATGAAGGCACCTCATCTCCACTCGCTCTTCATGGATGTGATCTAAAG CTGTTATCAATCAAAATCAATGGCACAGAGCTGAAGAGTGACAAGTATACAGTTGATCCACGCCATCTGACGATTTTGAC ACCACCTGCTGGTGTATTCAACATGGAAATTGTTACGGAGATTTATCCTCAGCTCAACACATCTTTGGAGGGTCTGTACA GGTCGACTGGTAATTTTTGCACCCAATGTGAAGCAGAAGGATTCCGGAAAATTACCTACTTTCAGGATCGCCCGGACGTG ATGGCAAAATATACTTGTCGTATTGAAGGTGATAAAACTCTGTATCCGGTGTTGTTGTCTAATGGCAATCTTATCGAACA GGGTGATCTTGAGGGTGGAAAGCATTACGCACTATGGGAGGACCCATTCAAGAAACCATGCTACTTGTTTGCGCTAGTTG CTGGTCAGTTGGAGTGCCGGGAGGACTCATTTGTTACATGTTCTGGCCGCAAAGTTACACTTCGAATTTGGACTCCTGCT CAAGATTTGCCAAAAACATCACATGCTATGTATTCTCTTAAAGAAGCTATGAAATGGGATGAGGAGGTTTTTGGTCTTGA ATATGATCTTGATTTGTTCAACATTGTTGTTGTTCCTGATTTCAATATGGGAGCAATGGAAAACAAGAGCTTGAACGTAT TTCAATCTAGACTTGTGCTAGCATCACCAGAAGCTGCCACTGATGGTGATTATGCTGCAATTTTGGGTGTCATTGGACAT GAGTATTTCCACAACTGGACTGGGAATAGAGTGACTTGCCGTGATTGGTTCCAACTAACGTTGAAAGAAGGACTAACTGT CTTCAGGGATCAGGAATTCTCATCAGATCTTGGCTGTCGCACAGTAAAGCGAATAGCTGATGTCTCTAAACTTAGATCCT ATCAATTCCCTCAGGATGCTGGGCCTATGGCACATCCTATTCGCCCCCTTTCATATATCAAGATGGACAACTTCTATACC GTCACGGTTTACGAAAAGGGTGCTGAAGTCGTCAGGATGTACAAGACAATGTTTGGAGCTTCAGGGTTTCGAAAGGGCAT GGATCTTTACTTCCAAAGGCATGATGGACAAGCCGTGACTTGTGAAGACTTTTACGCAGCCATGTGTGATGCAAATAATG CACACTTGCCGAACTTCTTACAATGGTACTCTCAAGCAGGTACACCTACTGTAAAGGTAACTTCGTCATATGATGAAGGT TCCCAGGCATTCTCTTTGAAATTAAGTCAAGAAGTGCCACCTACCCCTGGCCAACTGATGAAAGAGCCAATGTTCATACC TGTTGCTGTTGGACTTGTTGATTCGATCGGAAAAGATATGCCCCTGACTTCCATCTACAGTGACGGAATGGTCCAAACAC TCTCTAACGATGGTCATCCAATCTTCACCACAGTGCTTCAGTTTAAGAAGAAGGAGGAAGAGTTTATATTTAATAATGTA CCTGAGAGACCAGTTCCTTCCTTGTTGAGGGGATACAGTGCTCCCATCCGTCTTGATTCTGATCTGACCGAGAGTGACTT ATATTTCTTACTTGCCAATGATTCAGATGAATTTAACAGATGGGAAGCAGGTCAAATATTGGCACGCAAATTGATGTTCA GTCTTGTGGCTGACTTCCAACAACAGAAAACACTGGCGCTAAATACAAAATTTGTTGATGGACTTAGAGCAATCCTGCGA AGCACAAGCTTGGATAAAGAATTCATTGCAAAAGCAATAACTCTGCCTGGTCAAGGTGAGATTATGGATATGATGTCAAT TGCAGATCCTGATGCAGTTCATGCTGTCCGGACCTTTATTAAGAAAGAACTCGCCTTTCAACTCAAGGACGATCTTCTCG CAGCTGTAACAAGCAACAGAAGTTCTGAAGCTTATGCATTTAACCATGATAGCATGGCTCGCCGTGCGTTGAAAAATACA TGTCTCGCTTATCTTGCATCCCTGAATGAGCCAGATGTCACTGAACTTGCATTAAATGAATACAAGTCTGCTACTAACAT GACCGAGCAGTTTGCTGCATTAGCAGCATTGTCTCAAAATCCAGGTCAAGTCCGTGAGGATGCCCTTTTGGACTTCTATA ACAAATGGCAGCAAGATTATTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACCTCGGACATTCCTGGAAATGTAGCC AATGTTCAAAAGTTACTGGCTCATCCTGCTTTTGACATGCGGAATCCGAACAAGGTATACTCCTTAATTGGAGGATTTTG TGGGTCACCTGTGAGTTTTCACGCGAAAGATGGTTCTGGCTACAAGTTCTTGGGTGAAGTTGTCTTACAGCTCGACAAAA TAAATCCTCAGGTGGCATCCCGCATGGTGTCAGCGTTCTCTCGATGGAGGAGATATGATGAGACCAGACAAGCTCTTGCT AAGGCCCAGCTGGAGATGATCATCTCAGCCAATGGACTCTCTGAAAATGTCTATGAGATAGCTTTGAAAAGTTTGGCAGC TTAG |
Ta_5B:306433040-306433044:+ does not have available information here.