
Microexon ID | Ta_5A:359029484-359029488:+ |
Species | Triticum Aestivum | Coordinates | 5A:359029484..359029488 |
Microexon Cluster ID | MEP07 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 33,19,5,12,39 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GCWCAYCCTGTTCGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCACG |
Microexon Amino Acid seq | VT |
Microexon-tag DNA Seq | GCACATCCTATTCGCCCCCTTTCATATATCAAGATGGACAACTTCTATACCGTCACGGTTTACGAAAAGGGTGCTGAAGTCGTCAGGATGTACAAGACAATGTTTGGA |
Microexon-tag Amino Acid Seq | AHPIRPLSYIKMDNFYTVTVYEKGAEVVRMYKTMFG |
Microexon-tag spanning region | 359029190-359029734 |
Microexon-tag prediction score | 0.9734 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5A02G168500.2x |
Reference Transcript ID | TraesCS5A02G168500.2 |
Gene ID | TraesCS5A02G168500 |
Gene Name | NA |
Transcript ID | TraesCS5A02G168500.2 |
Protein ID | |
Gene ID | TraesCS5A02G168500 |
Gene Name | |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 4.90E-50 |
Motif start | 330 |
Motif end | 541 |
Protein seq | >TraesCS5A02G168500.2 MARRLIRPAAACQGCGLVKAGFLGVVSPLHYQRLPYSSSKRGSPGNKYSGCLANLTKEGSHWTGTRSNPLLSLHSSKFVS KRTASLIATGPSPAATEEPEMDHPKEIFLKDYKKPDYLFDTVDLEFQLGDEKTMVTSKIAVSPGNEGTSSPLALHGCDLK LLSIKINGTELKSDKYTVDPRHLTILTPPAGVFNMEIVTEIYPQLNTSLEGLYRSTGNFCTQCEAEGFRKITYFQDRPDV MAKYTCRIEGDKTLYPVLLSNGNLIEQGDLEGGKHYALWEDPFKKPCYLFALVAGQLECREDSFVTCSGRKVTLRIWTPA QDLPKTSHAMYSLKEAMKWDEEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNVFQSRLVLASPEAATDGDYAAILGVIGH EYFHNWTGNRVTCRDWFQLTLKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRSYQFPQDAGPMAHPIRPLSYIKMDNFYT VTVYEKGAEVVRMYKTMFGASGFRKGMDLYFQRHDGQAVTCEDFYAAMCDANNAHLPNFLQWYSQAGTPTVKVTSSYDEG SQAFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVDSTGKDMPLTSIYSDGRVQTLSNDGHPIFTTVLQFKKKEEEFIFNNV PERPVPSLLRGYSAPIRLDSDLTESDLYFLLANDSDEFNRWEAGQILARKLMFSLVADFQQQKTLALNTKFVDGLRAILR STSLDKEFIAKAITLPGQGEIMDMMSIADPDAVHAVRTFIKKELAFQLKDDLLAAVTSNRSSEAYAFNHDSVARRALKNT CLAYLASLNEPDVTELALNEYKSATNMTEQFAALAALSQNPGQVREDALLDFYNKWQQDYLVVSKWFALQATSDIPGNVA NVQKLLAHPAFDMRNPNKVYSLIGGFCGSPVSFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRWRRYDETRQALA KAQLEMIISANGLSENVYEIALKSLAA* |
CDS seq | >TraesCS5A02G168500.2 ATGGCTCGTCGTCTCATTAGGCCCGCCGCGGCGTGCCAAGGTTGCGGTTTGGTTAAGGCTGGGTTTCTGGGCGTGGTCTC CCCTCTCCATTATCAAAGATTGCCTTACTCCTCTTCAAAGAGAGGTTCCCCAGGGAATAAGTACTCTGGCTGCCTCGCTA ATCTAACAAAGGAGGGTTCACACTGGACAGGAACAAGGTCCAATCCTTTGTTGTCGTTACATAGTTCAAAGTTTGTCAGC AAGAGGACAGCTAGTTTGATTGCAACAGGGCCATCTCCTGCTGCAACTGAAGAACCAGAGATGGACCATCCAAAGGAGAT ATTCTTGAAAGACTACAAAAAACCTGACTACTTGTTTGACACGGTGGATTTAGAATTTCAACTTGGTGATGAAAAGACCA TGGTTACTTCTAAAATAGCTGTATCTCCAGGCAATGAAGGCACCTCATCTCCACTCGCTCTTCATGGATGTGATCTGAAG CTGTTATCAATCAAAATCAACGGCACAGAGCTGAAGAGTGACAAGTATACAGTTGATCCACGCCATCTGACGATTTTGAC ACCACCTGCTGGTGTATTCAACATGGAAATTGTTACGGAGATTTATCCTCAGCTCAACACATCTTTGGAGGGTCTGTACA GGTCGACTGGTAATTTTTGCACCCAATGTGAAGCAGAAGGATTCCGGAAAATTACCTACTTTCAGGATCGCCCGGACGTG ATGGCAAAATATACTTGTCGTATTGAAGGTGATAAAACTCTGTATCCGGTGTTGTTGTCTAACGGCAATCTTATCGAACA GGGTGATCTTGAGGGTGGAAAGCATTACGCACTATGGGAGGACCCATTCAAGAAACCATGCTACTTGTTTGCGCTAGTTG CTGGTCAGTTGGAGTGCCGGGAGGACTCATTTGTTACATGTTCTGGCCGCAAAGTTACACTTCGAATTTGGACTCCTGCT CAAGATTTGCCAAAAACATCACATGCTATGTATTCTCTTAAAGAAGCTATGAAATGGGATGAGGAGGTTTTTGGTCTTGA ATATGATCTTGATTTGTTCAACATTGTTGTTGTTCCTGATTTCAATATGGGAGCAATGGAAAACAAGAGCTTGAACGTAT TTCAATCTAGACTTGTGCTAGCATCACCAGAAGCTGCCACTGATGGTGATTATGCTGCAATTTTGGGTGTCATTGGACAT GAGTATTTCCACAACTGGACTGGGAATAGAGTGACTTGCCGTGATTGGTTCCAACTAACATTGAAGGAAGGACTAACTGT CTTCAGGGATCAGGAATTCTCATCAGATCTTGGCTGTCGCACAGTAAAGCGCATAGCTGATGTCTCTAAACTTAGATCCT ATCAATTCCCTCAGGATGCTGGGCCTATGGCACATCCTATTCGCCCCCTTTCATATATCAAGATGGACAACTTCTATACC GTCACGGTTTACGAAAAGGGTGCTGAAGTCGTCAGGATGTACAAGACAATGTTTGGAGCTTCAGGGTTTCGAAAGGGCAT GGATCTTTACTTCCAAAGGCATGATGGACAAGCCGTGACTTGTGAAGACTTTTACGCAGCCATGTGTGATGCAAATAATG CACACTTGCCGAACTTTTTACAATGGTACTCTCAAGCAGGTACACCTACTGTAAAGGTAACTTCATCATATGATGAAGGT TCCCAGGCATTCTCTTTGAAATTAAGTCAAGAAGTGCCCCCTACCCCTGGCCAACCGATGAAAGAGCCAATGTTCATACC TGTTGCTGTTGGACTTGTTGATTCGACCGGAAAAGATATGCCCCTGACTTCCATCTACAGTGACGGAAGGGTCCAAACAC TCTCTAATGATGGTCATCCAATCTTCACCACAGTGCTTCAGTTTAAGAAGAAGGAGGAAGAGTTTATATTCAATAATGTG CCTGAGAGACCAGTTCCTTCCTTGTTGAGGGGATACAGTGCTCCCATCCGTCTTGATTCTGATCTGACTGAGAGTGACTT ATATTTCTTACTTGCCAATGATTCAGATGAATTTAACAGATGGGAAGCAGGTCAAATATTGGCACGCAAATTGATGTTCA GTCTTGTGGCTGACTTCCAACAACAGAAAACACTGGCCCTAAATACAAAATTTGTTGATGGACTTAGAGCAATCCTGCGA AGCACAAGCTTGGATAAAGAATTCATTGCAAAAGCAATAACTCTGCCTGGTCAAGGTGAGATTATGGATATGATGTCAAT TGCAGATCCCGATGCAGTTCATGCTGTCCGGACCTTTATTAAGAAAGAACTCGCCTTTCAACTCAAGGACGATCTTCTCG CAGCTGTAACAAGCAACAGAAGCTCTGAAGCTTATGCATTTAACCATGATAGCGTGGCTCGCCGTGCGTTGAAAAATACA TGTCTTGCTTATCTTGCATCCCTGAATGAGCCAGATGTCACTGAACTTGCATTAAATGAATACAAGTCTGCTACTAACAT GACCGAGCAGTTTGCTGCATTAGCAGCATTGTCTCAAAATCCAGGTCAAGTCCGTGAGGATGCCCTTTTGGACTTCTATA ACAAATGGCAGCAAGATTATTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACCTCGGACATTCCTGGAAATGTAGCC AATGTTCAAAAGTTACTGGCTCATCCTGCTTTTGACATGCGGAATCCGAACAAGGTATACTCTTTAATTGGAGGATTTTG TGGGTCACCTGTGAGTTTTCATGCGAAAGATGGTTCTGGCTACAAGTTCTTGGGTGAAGTTGTCTTACAGCTCGACAAAA TAAATCCTCAGGTGGCATCCCGCATGGTTTCAGCGTTCTCTCGATGGAGGAGATATGATGAGACCAGACAAGCTCTTGCT AAGGCCCAGCTGGAGATGATCATCTCAGCCAATGGACTCTCTGAAAATGTCTATGAGATAGCTTTGAAAAGTTTGGCAGC TTAG |
Ta_5A:359029484-359029488:+ does not have available information here.