
Microexon ID | Sb_7:60038262-60038266:+ |
Species | Sorghum Bicolor | Coordinates | 7:60038262..60038266 |
Microexon Cluster ID | MEP07 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 33,19,5,12,39 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GCWCAYCCTGTTCGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGACG |
Microexon Amino Acid seq | VT |
Microexon-tag DNA Seq | GCACATCCTATCCGCCCTCATTCCTATATCAAGATGGACAACTTCTATACTGTGACGGTTTACGAGAAGGGTGCTGAAGTTGTCAGAATGTACAAGACCATGTTTGGA |
Microexon-tag Amino Acid Seq | AHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFG |
Microexon-tag spanning region | 60037963-60038521 |
Microexon-tag prediction score | 0.9788 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EES14057x |
Reference Transcript ID | EES14057 |
Gene ID | SORBI_3007G165600 |
Gene Name | NA |
Transcript ID | EES14057 |
Protein ID | |
Gene ID | SORBI_3007G165600 |
Gene Name | |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 2.30E-50 |
Motif start | 329 |
Motif end | 540 |
Protein seq | >EES14057 MARRLISPAAACRGCGFVRPGFLAAFSSFHYRTLPSCSPKRTSSVKSCFSNTYNLRKEGSRWIRSEPPLSLNRAKFVGKR TSCSVATEPPPAATEEPNMDAPKEIFLKDYKAPDYYFDTVDLQFQLGEEKTIVTSKIVVSPGVEAGNSAPLFLHGRDLKL LSIKVNGTELKGEEYKVNSRHLTLLTPPAGVFNLEIVTEIYPQLNTSLEGLYKSTGNFCTQCEAEGFRKITFFQDRPDVM AKYTCRIEADKTLYPVLLSNGNLIEQGDLEGGKHYALWEDPFKKPSYLFALVAGQLGCREDSFVTCSGRNVTLRIWTPAQ DLPKTAHAMYSLKAAMKWDEEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNIFQSRLVLASPETATDGDYAAILGVVGHE YFHNWTGNRVTCRDWFQLTLKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRIYQFPQDAGPMAHPIRPHSYIKMDNFYTV TVYEKGAEVVRMYKTMFGASGFRKGMDLYFQRHDGQAVTCEDFYAAMCDANNAQLPNFLQWYSQAGTPIVKVASSYDPSS QTFSLKFSQEVPPTPGQPVKEPMFIPVAVGLVDPTGKDMPLTSVYSDGTLQTLSTDGQPVFTTVLQFKKKEEEFIFKNIP ERPVPSLLRGYSAPVRLDSDLSESDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQQKTLALNPKFVDGIRSILRN TSLDKEFIAKAITLPGQGEIMDMMEVADPDAVHAVRNFIKKELALQLKDDLLAAVKSNRSSEAYTFDHDSMARRALKNTC LAYLASLNEPDFTELALHEYKSATNMTEQFAALAALSQNPGPVRDDALLDFYNKWQDDYLVVSKWFALQATSEIPGNVAN VQKLLSHPAFDMRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKINPQVASRMVSAFSRWRRYDKTRQDLAK AQLEMIVSANGLSENVYEIASKSLAG* |
CDS seq | >EES14057 ATGGCGCGTCGCCTGATTAGCCCCGCAGCGGCGTGCCGAGGCTGCGGTTTCGTTAGGCCCGGCTTTCTGGCTGCCTTCTC CTCCTTCCATTATCGAACCTTGCCATCGTGCTCACCGAAGAGGACTTCCTCAGTAAAGAGTTGCTTTAGCAACACTTACA ATTTAAGGAAAGAGGGTTCACGTTGGATAAGATCCGAGCCTCCCTTGTCACTAAATAGGGCAAAGTTTGTTGGCAAGAGG ACATCTTGTTCTGTTGCAACAGAGCCGCCTCCTGCTGCCACTGAAGAACCAAACATGGATGCCCCCAAGGAGATATTCTT GAAAGATTACAAGGCCCCTGATTATTATTTTGACACGGTGGATTTGCAATTTCAACTTGGTGAAGAGAAGACCATAGTTA CATCTAAAATAGTTGTATCTCCTGGAGTTGAAGCTGGCAACTCAGCTCCACTATTTCTTCATGGGCGTGACCTCAAGCTG TTATCAATCAAAGTCAATGGCACTGAATTAAAGGGTGAAGAGTATAAAGTCAATTCTCGCCATCTGACACTTTTAACACC ACCTGCTGGCGTATTCAACTTGGAAATAGTTACAGAAATATATCCTCAGCTAAACACATCATTGGAGGGGCTGTACAAGT CTACTGGTAACTTCTGCACTCAGTGTGAAGCAGAAGGGTTTCGGAAGATTACCTTCTTTCAGGATCGCCCGGATGTTATG GCAAAATATACTTGCCGTATTGAAGCTGATAAAACTTTGTATCCAGTATTATTGTCCAATGGGAATCTTATTGAGCAGGG AGACCTTGAGGGTGGAAAGCATTATGCACTGTGGGAGGATCCCTTCAAGAAACCAAGCTACCTGTTTGCTCTAGTTGCTG GTCAGCTGGGATGCCGGGAGGATTCATTTGTTACATGCTCTGGCCGCAACGTAACACTAAGAATTTGGACTCCTGCCCAA GATTTACCAAAAACAGCACATGCTATGTATTCTCTCAAAGCAGCAATGAAGTGGGATGAGGAGGTCTTTGGTCTGGAGTA TGATCTTGATTTATTCAACATTGTTGTTGTTCCCGATTTCAATATGGGAGCAATGGAAAACAAGAGCTTGAATATATTTC AATCTAGACTTGTGTTGGCATCACCAGAGACTGCCACTGATGGTGATTATGCTGCAATTTTGGGTGTTGTTGGACATGAG TATTTCCACAACTGGACTGGGAATAGAGTAACTTGCCGTGATTGGTTCCAGCTAACCCTGAAAGAAGGACTGACCGTTTT CAGGGATCAGGAGTTCTCTTCGGATCTTGGCTGTCGTACGGTAAAACGTATTGCTGATGTCTCCAAACTCAGAATCTATC AATTCCCACAGGATGCTGGGCCTATGGCACATCCTATCCGCCCTCATTCCTATATCAAGATGGACAACTTCTATACTGTG ACGGTTTACGAGAAGGGTGCTGAAGTTGTCAGAATGTACAAGACCATGTTTGGAGCGTCAGGGTTCCGAAAGGGCATGGA TCTTTATTTCCAAAGGCATGATGGGCAAGCTGTCACTTGTGAAGACTTCTATGCAGCCATGTGTGATGCAAATAATGCAC AACTGCCAAACTTTTTACAATGGTACTCTCAAGCAGGTACGCCTATAGTCAAGGTGGCATCTTCATATGATCCTAGTTCT CAGACATTCTCTTTGAAATTTAGCCAAGAAGTACCACCCACTCCTGGCCAACCAGTTAAGGAGCCTATGTTTATACCTGT TGCTGTTGGGCTTGTTGACCCTACTGGAAAAGATATGCCCCTCACTTCCGTTTACAGTGATGGAACTCTCCAAACACTCT CTACTGATGGCCAGCCAGTCTTCACTACTGTGCTGCAGTTTAAAAAGAAGGAAGAAGAGTTTATATTTAAGAACATTCCC GAGAGGCCAGTTCCTTCTTTGTTGAGGGGATATAGTGCTCCTGTCCGTCTAGATTCTGATCTCAGTGAGAGTGACCTATT TTTCTTGCTTGCCAATGACTCAGATGAATTTAACAGATGGGAAGCTGGCCAAGTTTTGGCACGTAAGTTGATGCTCAGTC TTGTAGCTGACTTCCAGCAACAGAAAACACTGGCCCTAAATCCAAAATTTGTTGATGGGATTAGATCAATTCTGCGCAAC ACAAGCTTGGATAAGGAATTCATTGCGAAAGCAATAACTTTGCCTGGTCAAGGGGAGATTATGGATATGATGGAAGTTGC AGATCCTGATGCAGTTCATGCTGTCCGTAACTTTATTAAGAAGGAGCTTGCCTTGCAACTCAAAGATGATCTTCTTGCAG CTGTGAAAAGCAACAGGAGTTCTGAGGCTTACACATTTGACCATGATAGTATGGCTCGCCGTGCATTGAAAAATACATGC CTTGCATACCTTGCATCATTGAATGAGCCAGATTTCACTGAGCTTGCACTGCATGAGTACAAGTCTGCGACTAACATGAC AGAGCAGTTTGCTGCATTAGCAGCATTATCCCAAAATCCAGGCCCAGTTCGTGATGATGCCCTCTTGGATTTCTATAACA AGTGGCAGGATGACTACTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACTTCAGAGATTCCTGGAAATGTTGCAAAT GTTCAGAAGTTGCTGTCTCACCCTGCTTTCGACATGAGGAATCCCAACAAGGTTTACTCGCTAATCGGTGGATTCTGTGG CTCACCTGTGAACTTCCACGCGAAAGATGGATCTGGGTACAAGTTCTTGGGTGAAATTGTTTTGCAGCTTGACAAGATAA ACCCTCAGGTGGCCTCCCGCATGGTTTCAGCATTTTCTCGGTGGAGGCGATATGACAAGACCAGACAAGATCTTGCCAAG GCCCAGCTGGAGATGATCGTGTCGGCCAATGGACTCTCCGAAAACGTGTACGAGATTGCTTCAAAAAGCTTGGCGGGTTA G |
Sb_7:60038262-60038266:+ does not have available information here.