
Microexon ID | Os_8:28176983-28176987:- |
Species | Oryza sativa | Coordinates | 8:28176983..28176987 |
Microexon Cluster ID | MEP07 |
Size | 5 |
Phase | 1 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 33,19,5,12,39 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | GCWCAYCCTGTTCGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TAACG |
Microexon Amino Acid seq | VT |
Microexon-tag DNA Seq | GCGCATCCTATTCGTCCGCATTCGTATATCAAGATGGACAATTTTTATACCGTAACGGTTTATGAAAAGGGTGCTGAAGTTGTTAGAATGTACAAGACCATGTTTGGA |
Microexon-tag Amino Acid Seq | AHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFG |
Microexon-tag spanning region | 28176712-28177284 |
Microexon-tag prediction score | 0.9684 |
Overlapped with the annotated transcript (%) | 91.96 |
New Transcript ID | Os08t0562700-01x |
Reference Transcript ID | Os08t0562700-01 |
Gene ID | Os08g0562700 |
Gene Name | NA |
Os_8:28176983-28176987:- does not have available information here.
Microexon DNA seq | TAACG |
Microexon Amino Acid seq | VT |
Microexon-tag DNA Seq | GCGCATCCTATTCGTCCGCATTCGTATATCAAGATGGACAATTTTTATACCGTAACGGTTTATGAAAAGGGTGCTGAAGTTGTTAGAATGTACAAGACCATGTTTGGA |
Microexon-tag Amino Acid seq | AHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFG |
Transcript ID | Os.36566.1 |
Gene ID | Os.36566 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 1.7e-48 |
Motif start | 230 |
Motif end | 441 |
Protein seq | >Os.36566.1 MDLPKEIFLKEYKKPDYLFDSVNLEFQLGEDKTIVTSKIAVSPGTEGTSSPLTLHGRDLKLLSIKVNGKDLKSEDYMVDS RHLTVSRPPGGTFNLEIVTEIYPQLNTSLEGLYKSTGNFCTQCEAEGFRKITYFQDRPDVMATYTCRIEADKTLYPVLLS NGNLIEQGDLEGGKHYALWEDPFKKPSYLFALVAGQLDCREDSFTTCSGRKVTLRIWTPGQDLAKTAHAMYSLKAAMKWD EEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNIFQSRLVLASPETATDGDYAAILGVVGHEYFHNWTGNRVTCRDWFQLT LKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRTYQFPQDAGPMAHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFGA SGFRKGMDLYFQRHDGQAVTCEDFYAAMCDANNTQLPNFLQWYSQAGTPTVKVSSSYDASSQTFSLKFSQEVPPTPGQPV KEPMFIPIAVGLVDSTGKDMPLTSIYSDGMLQSLTSDGQPVFTTVLQFNKKEEEFIFNNIPEKPVPSLLRGYSAPVRLDS DLTESDLFFLLANDSDEFNRWEAGQVLSRKLMLSLVADFQQQKTLALNPKFVDGLRSILRNTSLDKEFIAKAITLPGQGE IMDMMPVADPDAVHAVRTFIKKELALQLKDDLLSTVTNNRSSEAYTFNHDSMARRALKNTCLAYLASLNEPDTTELAFVE YKSATNMTEQFAALAALSQNPGQVRDDTLLDFYNKWQHDYLVVSKWFALQATSDIPGNVANVQKLLGHPAFDMRNPNKVY SLIGGFCGSPVNFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRWRRYDESRQALAKAQLEMIVSANGLSENVYEI ASKSLAA* |
CDS seq | >Os.36566.1 ATGGATCTTCCAAAGGAGATATTCCTGAAAGAATACAAAAAGCCTGATTACTTATTTGACTCGGTCAATTTGGAATTTCA ACTTGGCGAAGACAAAACAATAGTTACATCTAAAATAGCTGTATCTCCAGGAACTGAAGGTACCTCCTCTCCACTTACTC TTCATGGGCGTGATCTGAAGCTGCTATCAATCAAAGTCAATGGCAAGGACCTTAAGAGTGAAGATTATATGGTTGATTCA CGCCATTTGACTGTTTCAAGACCACCTGGTGGTACATTCAACTTGGAAATTGTTACAGAAATATATCCTCAGCTAAATAC ATCATTGGAGGGACTTTACAAGTCAACTGGCAATTTTTGCACCCAGTGTGAAGCAGAAGGGTTCCGGAAGATTACATACT TTCAGGATCGTCCAGATGTTATGGCAACATATACTTGCCGTATCGAAGCTGATAAGACGTTGTATCCAGTACTGTTGTCC AATGGGAATCTTATAGAGCAGGGGGATCTTGAGGGTGGCAAGCATTATGCATTGTGGGAAGACCCCTTCAAGAAACCAAG CTACTTATTTGCTTTAGTTGCTGGTCAGTTGGATTGCAGGGAGGACTCATTTACTACATGTTCTGGCCGAAAAGTAACAC TTAGAATTTGGACTCCTGGTCAAGATTTAGCAAAGACAGCGCATGCTATGTATTCTCTTAAAGCAGCTATGAAGTGGGAT GAGGAGGTTTTTGGCCTTGAATATGATCTTGATTTGTTCAATATTGTTGTTGTTCCAGATTTCAATATGGGAGCAATGGA GAACAAGAGCTTAAACATATTTCAATCTAGACTTGTGCTGGCATCACCAGAGACAGCTACTGATGGGGATTATGCTGCAA TTTTAGGTGTCGTTGGACATGAGTATTTCCACAACTGGACTGGTAATAGAGTGACTTGTCGTGATTGGTTCCAGCTCACT CTGAAAGAAGGATTGACTGTATTCCGGGATCAGGAATTCTCATCAGATCTTGGTTGTCGCACAGTAAAACGTATAGCCGA TGTTTCTAAACTCAGGACCTATCAATTTCCACAGGATGCTGGCCCTATGGCGCATCCTATTCGTCCGCATTCGTATATCA AGATGGACAATTTTTATACCGTAACGGTTTATGAAAAGGGTGCTGAAGTTGTTAGAATGTACAAGACCATGTTTGGAGCT TCAGGGTTTCGAAAGGGCATGGATCTTTACTTCCAAAGGCACGACGGGCAAGCTGTGACTTGTGAAGACTTTTATGCTGC AATGTGTGATGCAAATAACACCCAGCTGCCAAACTTTTTACAATGGTACTCTCAGGCAGGTACTCCAACTGTTAAAGTGA GCTCTTCATACGATGCAAGTTCTCAGACATTTTCTCTGAAATTTAGTCAAGAAGTGCCACCTACCCCTGGCCAACCAGTT AAAGAGCCGATGTTCATTCCTATTGCTGTCGGACTTGTTGATTCTACCGGAAAGGATATGCCCCTAACTTCCATTTACAG TGATGGGATGCTCCAATCACTCACTAGTGATGGCCAGCCAGTCTTCACTACTGTTCTTCAATTTAATAAGAAGGAGGAAG AATTCATATTTAACAACATACCTGAGAAACCAGTGCCTTCCTTGTTGAGGGGATACAGTGCTCCTGTTCGTCTTGATTCT GATCTGACTGAGAGTGACTTGTTTTTCCTACTTGCCAATGATTCGGATGAATTTAACAGGTGGGAAGCTGGTCAGGTGCT GTCACGTAAACTGATGCTCAGTCTTGTAGCTGACTTCCAGCAACAGAAAACACTGGCCCTGAACCCTAAATTTGTTGATG GACTTAGATCAATCCTGCGGAACACAAGCTTGGATAAAGAATTCATTGCGAAAGCGATAACTTTGCCGGGTCAAGGGGAG ATTATGGATATGATGCCAGTTGCAGATCCTGATGCAGTTCATGCTGTCCGTACCTTTATTAAGAAGGAGCTTGCCCTTCA ACTCAAAGATGACCTTCTTTCAACAGTGACAAATAACAGAAGTTCTGAAGCTTATACATTTAACCATGATAGCATGGCCC GCCGTGCATTGAAAAACACATGCCTTGCTTATCTTGCATCTCTGAATGAACCGGACACCACTGAACTTGCATTTGTTGAA TACAAGTCTGCTACTAACATGACGGAGCAGTTTGCTGCACTAGCAGCATTGTCTCAAAATCCAGGCCAAGTTCGTGATGA CACCCTTCTGGACTTCTATAACAAATGGCAGCATGATTATTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACATCAG ACATCCCTGGAAATGTTGCTAACGTTCAAAAGTTACTTGGTCACCCTGCTTTTGACATGAGGAATCCGAACAAGGTGTAT TCGCTAATTGGAGGATTTTGTGGGTCCCCTGTGAATTTCCATGCAAAAGATGGCTCTGGTTACAAGTTCTTGGGTGAAGT TGTTTTACAGCTAGACAAGATAAATCCTCAGGTGGCCTCCCGCATGGTGTCAGCTTTCTCTCGGTGGAGGCGATATGATG AGAGCAGACAAGCTCTTGCTAAGGCTCAGCTGGAGATGATCGTGTCAGCCAATGGGCTATCAGAGAATGTGTACGAGATA GCTTCAAAGAGCCTGGCAGCTTGA |