Microexon ID Os_8:28176983-28176987:-
Species Oryza sativa
Coordinates 8:28176983..28176987
Microexon Cluster ID MEP07
Size 5
Phase 1
Pfam Domain Motif Peptidase_M1
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 33,19,5,12,39
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq GCWCAYCCTGTTCGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TAACG
Microexon Amino Acid seq VT
Microexon-tag DNA Seq GCGCATCCTATTCGTCCGCATTCGTATATCAAGATGGACAATTTTTATACCGTAACGGTTTATGAAAAGGGTGCTGAAGTTGTTAGAATGTACAAGACCATGTTTGGA
Microexon-tag Amino Acid Seq AHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFG
Microexon-tag spanning region28176712-28177284
Microexon-tag prediction score0.9684
Overlapped with the annotated transcript (%) 91.96
New Transcript ID Os08t0562700-01x
Reference Transcript ID Os08t0562700-01
Gene ID Os08g0562700
Gene Name NA
Os_8:28176983-28176987:- does not have available information here.
Microexon DNA seq TAACG
Microexon Amino Acid seq VT
Microexon-tag DNA Seq GCGCATCCTATTCGTCCGCATTCGTATATCAAGATGGACAATTTTTATACCGTAACGGTTTATGAAAAGGGTGCTGAAGTTGTTAGAATGTACAAGACCATGTTTGGA
Microexon-tag Amino Acid seq AHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFG
Transcript ID Os.36566.1
Gene ID Os.36566
Gene Name NA
Pfam domain motif Peptidase_M1
Motif E-value 1.7e-48
Motif start 230
Motif end 441
Protein seq >Os.36566.1
MDLPKEIFLKEYKKPDYLFDSVNLEFQLGEDKTIVTSKIAVSPGTEGTSSPLTLHGRDLKLLSIKVNGKDLKSEDYMVDS
RHLTVSRPPGGTFNLEIVTEIYPQLNTSLEGLYKSTGNFCTQCEAEGFRKITYFQDRPDVMATYTCRIEADKTLYPVLLS
NGNLIEQGDLEGGKHYALWEDPFKKPSYLFALVAGQLDCREDSFTTCSGRKVTLRIWTPGQDLAKTAHAMYSLKAAMKWD
EEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNIFQSRLVLASPETATDGDYAAILGVVGHEYFHNWTGNRVTCRDWFQLT
LKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRTYQFPQDAGPMAHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFGA
SGFRKGMDLYFQRHDGQAVTCEDFYAAMCDANNTQLPNFLQWYSQAGTPTVKVSSSYDASSQTFSLKFSQEVPPTPGQPV
KEPMFIPIAVGLVDSTGKDMPLTSIYSDGMLQSLTSDGQPVFTTVLQFNKKEEEFIFNNIPEKPVPSLLRGYSAPVRLDS
DLTESDLFFLLANDSDEFNRWEAGQVLSRKLMLSLVADFQQQKTLALNPKFVDGLRSILRNTSLDKEFIAKAITLPGQGE
IMDMMPVADPDAVHAVRTFIKKELALQLKDDLLSTVTNNRSSEAYTFNHDSMARRALKNTCLAYLASLNEPDTTELAFVE
YKSATNMTEQFAALAALSQNPGQVRDDTLLDFYNKWQHDYLVVSKWFALQATSDIPGNVANVQKLLGHPAFDMRNPNKVY
SLIGGFCGSPVNFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRWRRYDESRQALAKAQLEMIVSANGLSENVYEI
ASKSLAA*
CDS seq >Os.36566.1
ATGGATCTTCCAAAGGAGATATTCCTGAAAGAATACAAAAAGCCTGATTACTTATTTGACTCGGTCAATTTGGAATTTCA
ACTTGGCGAAGACAAAACAATAGTTACATCTAAAATAGCTGTATCTCCAGGAACTGAAGGTACCTCCTCTCCACTTACTC
TTCATGGGCGTGATCTGAAGCTGCTATCAATCAAAGTCAATGGCAAGGACCTTAAGAGTGAAGATTATATGGTTGATTCA
CGCCATTTGACTGTTTCAAGACCACCTGGTGGTACATTCAACTTGGAAATTGTTACAGAAATATATCCTCAGCTAAATAC
ATCATTGGAGGGACTTTACAAGTCAACTGGCAATTTTTGCACCCAGTGTGAAGCAGAAGGGTTCCGGAAGATTACATACT
TTCAGGATCGTCCAGATGTTATGGCAACATATACTTGCCGTATCGAAGCTGATAAGACGTTGTATCCAGTACTGTTGTCC
AATGGGAATCTTATAGAGCAGGGGGATCTTGAGGGTGGCAAGCATTATGCATTGTGGGAAGACCCCTTCAAGAAACCAAG
CTACTTATTTGCTTTAGTTGCTGGTCAGTTGGATTGCAGGGAGGACTCATTTACTACATGTTCTGGCCGAAAAGTAACAC
TTAGAATTTGGACTCCTGGTCAAGATTTAGCAAAGACAGCGCATGCTATGTATTCTCTTAAAGCAGCTATGAAGTGGGAT
GAGGAGGTTTTTGGCCTTGAATATGATCTTGATTTGTTCAATATTGTTGTTGTTCCAGATTTCAATATGGGAGCAATGGA
GAACAAGAGCTTAAACATATTTCAATCTAGACTTGTGCTGGCATCACCAGAGACAGCTACTGATGGGGATTATGCTGCAA
TTTTAGGTGTCGTTGGACATGAGTATTTCCACAACTGGACTGGTAATAGAGTGACTTGTCGTGATTGGTTCCAGCTCACT
CTGAAAGAAGGATTGACTGTATTCCGGGATCAGGAATTCTCATCAGATCTTGGTTGTCGCACAGTAAAACGTATAGCCGA
TGTTTCTAAACTCAGGACCTATCAATTTCCACAGGATGCTGGCCCTATGGCGCATCCTATTCGTCCGCATTCGTATATCA
AGATGGACAATTTTTATACCGTAACGGTTTATGAAAAGGGTGCTGAAGTTGTTAGAATGTACAAGACCATGTTTGGAGCT
TCAGGGTTTCGAAAGGGCATGGATCTTTACTTCCAAAGGCACGACGGGCAAGCTGTGACTTGTGAAGACTTTTATGCTGC
AATGTGTGATGCAAATAACACCCAGCTGCCAAACTTTTTACAATGGTACTCTCAGGCAGGTACTCCAACTGTTAAAGTGA
GCTCTTCATACGATGCAAGTTCTCAGACATTTTCTCTGAAATTTAGTCAAGAAGTGCCACCTACCCCTGGCCAACCAGTT
AAAGAGCCGATGTTCATTCCTATTGCTGTCGGACTTGTTGATTCTACCGGAAAGGATATGCCCCTAACTTCCATTTACAG
TGATGGGATGCTCCAATCACTCACTAGTGATGGCCAGCCAGTCTTCACTACTGTTCTTCAATTTAATAAGAAGGAGGAAG
AATTCATATTTAACAACATACCTGAGAAACCAGTGCCTTCCTTGTTGAGGGGATACAGTGCTCCTGTTCGTCTTGATTCT
GATCTGACTGAGAGTGACTTGTTTTTCCTACTTGCCAATGATTCGGATGAATTTAACAGGTGGGAAGCTGGTCAGGTGCT
GTCACGTAAACTGATGCTCAGTCTTGTAGCTGACTTCCAGCAACAGAAAACACTGGCCCTGAACCCTAAATTTGTTGATG
GACTTAGATCAATCCTGCGGAACACAAGCTTGGATAAAGAATTCATTGCGAAAGCGATAACTTTGCCGGGTCAAGGGGAG
ATTATGGATATGATGCCAGTTGCAGATCCTGATGCAGTTCATGCTGTCCGTACCTTTATTAAGAAGGAGCTTGCCCTTCA
ACTCAAAGATGACCTTCTTTCAACAGTGACAAATAACAGAAGTTCTGAAGCTTATACATTTAACCATGATAGCATGGCCC
GCCGTGCATTGAAAAACACATGCCTTGCTTATCTTGCATCTCTGAATGAACCGGACACCACTGAACTTGCATTTGTTGAA
TACAAGTCTGCTACTAACATGACGGAGCAGTTTGCTGCACTAGCAGCATTGTCTCAAAATCCAGGCCAAGTTCGTGATGA
CACCCTTCTGGACTTCTATAACAAATGGCAGCATGATTATTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACATCAG
ACATCCCTGGAAATGTTGCTAACGTTCAAAAGTTACTTGGTCACCCTGCTTTTGACATGAGGAATCCGAACAAGGTGTAT
TCGCTAATTGGAGGATTTTGTGGGTCCCCTGTGAATTTCCATGCAAAAGATGGCTCTGGTTACAAGTTCTTGGGTGAAGT
TGTTTTACAGCTAGACAAGATAAATCCTCAGGTGGCCTCCCGCATGGTGTCAGCTTTCTCTCGGTGGAGGCGATATGATG
AGAGCAGACAAGCTCTTGCTAAGGCTCAGCTGGAGATGATCGTGTCAGCCAATGGGCTATCAGAGAATGTGTACGAGATA
GCTTCAAAGAGCCTGGCAGCTTGA