Microexon ID Hv_7H:31040093-31040097:-
Species Hordeum   Vulgare
Coordinates 7H:31040093..31040097
Microexon Cluster ID MEP07
Size 5
Phase 1
Pfam Domain Motif Peptidase_M1
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 33,19,5,12,39
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq GCWCAYCCTGTTCGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCACG
Microexon Amino Acid seq VT
Microexon-tag DNA Seq GCACATCCTATTCGCCCCCTTTCATATATCAAGATGGACAACTTCTATACAGTCACGGTTTATGAGAAGGGTGCTGAAGTCGTCAGGATGTACAAGACAATGTTTGGA
Microexon-tag Amino Acid Seq AHPIRPLSYIKMDNFYTVTVYEKGAEVVRMYKTMFG
Microexon-tag spanning region31039847-31040396
Microexon-tag prediction score0.9758
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.7HG0650600.1x
Reference Transcript ID HORVU.MOREX.r3.7HG0650600.1
Gene ID HORVU.MOREX.r3.7HG0650600
Gene Name NA
Transcript ID HORVU.MOREX.r3.7HG0650600.1
Protein ID
Gene ID HORVU.MOREX.r3.7HG0650600
Gene Name
Pfam domain motif Peptidase_M1
Motif E-value 3.50E-50
Motif start 330
Motif end 541
Protein seq >HORVU.MOREX.r3.7HG0650600.1
MARRLLSPAAACQGRGLVKAGFLAAVSPLHYQRLPFSSSKRGSPGNKDSGYRANLTKEGSHWTGTRSNSLLSLHSSKSVS
KRTACLTATEPPPAAAEEPEMDLPKEIFLKDYKKPDYLFDTVDLEFQLGDEKTIVTSKIAVSPGNEGTSSPLALNGRDLK
LLSIKINGTELKSDKYTVDPRHLTILTPPAGVFNMEIVTEIYPQLNTSLEGLYRSTGNFCTQCEAEGFRKITYFQDRPDV
MAKYTCRIEGDKTLYPVLLSNGNLIEQGDLEGGKHYALWEDPFKKPCYLFALVAGQLECREDSFVTCSGRKVTLRIWTPA
QDLPKTSHAMYSLKEAMKWDEEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNVFQSRLVLASPEAATDGDYAAILGVIGH
EYFHNWTGNRVTCRDWFQLTLKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRSYQFPQDAGPMAHPIRPLSYIKMDNFYT
VTVYEKGAEVVRMYKTMFGASGFRKGMDLYFQRHDGQAVTCEDFYAAMCDANNAQLPNFLQWYSQAGTPTVKATSSYDEG
SQTFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVDSTGEDMPLTSIYSDGMVQTLSNDGHPVFTTVLQFKKTEEEFIFNNV
PERPVPSLLRGYSAPIRLDSDLTESDLYFLLANDSDEFNRWEAGQILARKLMFSLVADFQQQKTLVLNTKFVDGLRAILR
STSLDKEFIAKAITLPGQGEIMDMMSIADPDAVHAVRTFIKKELAFQLKDDLLAAVTSNRSSEAYVFNHDSVARRALKNT
CLAYLASLNEPDVTELALNEYKSATNMTEQFAALAALSQNPGQVREDALLDFYNKWQQDYLVVSKWFALQATSDIPGNVA
NVRKLLAHPAFDMRNPNKVYSLIGGFCGSPVSFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRWRRYDETRQALA
KAQLEMIISANGLSENVYEIASKSLAA*
CDS seq >HORVU.MOREX.r3.7HG0650600.1
ATGGCCCGCCGTCTCCTTAGCCCCGCCGCGGCGTGCCAGGGTCGCGGCCTGGTTAAGGCCGGGTTTCTCGCCGCGGTTTC
CCCTCTCCATTATCAAAGATTGCCTTTCTCCTCTTCAAAGAGGGGTTCCCCAGGGAACAAGGACTCTGGCTACCGCGCTA
ATTTAACAAAGGAGGGTTCACACTGGACAGGAACAAGGTCCAATTCCTTGTTGTCATTACATAGTTCAAAGTCTGTCAGC
AAGAGGACAGCTTGTTTGACTGCAACAGAGCCACCTCCTGCTGCAGCTGAAGAACCAGAGATGGACCTTCCGAAGGAGAT
ATTCTTGAAAGACTACAAAAAACCCGACTACTTGTTTGACACGGTGGATTTAGAATTTCAACTTGGTGATGAAAAGACCA
TAGTCACTTCTAAAATAGCTGTATCTCCAGGCAATGAAGGCACCTCATCTCCACTCGCTCTTAACGGACGTGATCTAAAG
CTGTTATCAATCAAAATCAATGGCACAGAGCTGAAGAGTGACAAGTATACAGTTGATCCACGCCATCTGACAATTTTGAC
ACCACCTGCTGGTGTATTCAACATGGAAATTGTTACGGAGATTTATCCTCAGCTCAACACATCTTTGGAGGGTCTGTACA
GGTCGACTGGTAATTTTTGCACCCAATGTGAAGCAGAAGGATTCAGGAAAATCACCTACTTTCAGGATCGCCCGGACGTC
ATGGCAAAATATACTTGTCGTATTGAAGGTGATAAAACTCTGTATCCAGTGTTGTTGTCTAACGGCAATCTTATCGAGCA
GGGTGATCTTGAGGGTGGAAAGCACTACGCACTATGGGAGGACCCATTCAAGAAACCATGCTACTTGTTTGCGCTAGTTG
CTGGTCAGTTGGAGTGCCGGGAGGACTCATTTGTTACATGTTCTGGCCGCAAAGTTACACTTCGAATTTGGACTCCTGCT
CAAGATTTGCCAAAAACATCACATGCTATGTATTCTCTTAAAGAAGCTATGAAATGGGATGAGGAGGTTTTTGGTCTTGA
ATATGATCTCGATTTGTTCAACATTGTTGTTGTTCCTGATTTCAATATGGGAGCAATGGAAAACAAGAGCTTGAACGTAT
TTCAATCTAGACTTGTGCTAGCATCACCAGAAGCTGCCACTGATGGTGATTATGCTGCAATTTTGGGTGTCATTGGACAT
GAGTATTTCCACAACTGGACTGGGAATAGAGTGACTTGTCGTGATTGGTTCCAACTAACGTTGAAAGAAGGACTAACTGT
CTTCAGGGATCAGGAATTCTCATCAGATCTTGGCTGTCGCACAGTAAAGCGCATAGCTGATGTCTCTAAACTTAGATCCT
ATCAATTCCCTCAGGATGCTGGGCCTATGGCACATCCTATTCGCCCCCTTTCATATATCAAGATGGACAACTTCTATACA
GTCACGGTTTATGAGAAGGGTGCTGAAGTCGTCAGGATGTACAAGACAATGTTTGGAGCTTCAGGGTTTCGGAAGGGCAT
GGATCTTTACTTCCAAAGGCATGATGGACAAGCCGTGACTTGTGAAGACTTTTACGCAGCCATGTGTGATGCAAATAATG
CACAGTTGCCGAACTTTTTACAATGGTACTCTCAAGCAGGTACACCTACTGTTAAGGCAACTTCGTCATATGATGAAGGT
TCCCAGACATTCTCTTTGAAATTAAGTCAAGAAGTGCCACCTACCCCTGGCCAACCGATGAAAGAGCCAATGTTCATACC
TGTTGCTGTTGGACTTGTTGATTCTACCGGAGAAGATATGCCCCTGACTTCCATCTACAGTGATGGGATGGTCCAAACAC
TCTCTAATGATGGTCATCCAGTCTTCACCACAGTTCTTCAGTTTAAGAAGACGGAGGAAGAGTTTATATTTAATAATGTA
CCTGAGAGACCGGTTCCTTCCTTGTTGAGGGGATACAGTGCTCCCATCCGTCTTGATTCTGATCTGACTGAGAGTGACTT
GTATTTCTTACTTGCCAATGATTCAGATGAATTTAACAGATGGGAAGCAGGTCAAATATTGGCACGCAAATTGATGTTCA
GTCTTGTGGCTGACTTCCAACAACAGAAAACATTGGTGCTAAATACAAAATTTGTTGATGGACTTAGAGCAATCCTGCGA
AGCACAAGCTTGGATAAAGAATTCATTGCAAAAGCAATAACTCTGCCTGGTCAAGGCGAGATTATGGACATGATGTCAAT
TGCAGATCCCGATGCAGTTCATGCTGTCCGGACCTTTATTAAGAAAGAACTTGCCTTTCAACTCAAAGACGATCTTCTTG
CTGCTGTAACAAGTAACAGAAGTTCTGAAGCTTATGTATTTAACCATGATAGCGTGGCTCGCCGTGCGTTGAAAAATACA
TGTCTCGCTTATCTTGCATCCCTGAATGAGCCAGATGTCACTGAACTTGCATTAAATGAGTACAAGTCTGCTACTAACAT
GACCGAGCAGTTTGCTGCATTAGCAGCATTGTCTCAAAATCCAGGTCAAGTCCGTGAGGATGCCCTTTTGGACTTCTATA
ACAAATGGCAGCAAGATTATTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACCTCGGACATTCCTGGAAATGTAGCC
AATGTTCGGAAGTTACTGGCTCATCCTGCTTTTGACATGCGGAATCCGAACAAGGTATACTCTTTAATTGGAGGATTTTG
TGGGTCACCTGTGAGTTTTCACGCGAAAGATGGTTCTGGTTACAAGTTCTTGGGTGAAGTTGTTTTACAGCTCGACAAAA
TAAATCCTCAGGTGGCATCCCGCATGGTGTCAGCATTCTCTCGATGGAGGAGATATGACGAGACGAGACAAGCTCTTGCT
AAGGCCCAGTTGGAGATGATTATCTCAGCCAATGGACTCTCTGAAAATGTCTATGAGATAGCCTCGAAAAGTCTGGCAGC
TTAG
Hv_7H:31040093-31040097:- does not have available information here.