
Microexon ID | Zm_7:141291438-141291442:- |
Species | Zea mays | Coordinates | 7:141291438..141291442 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAGCGCATGGTCCGCCTAGGCGCCGACTGGCTACATATGGACATCATGGATGGGCACTTCGTTCCTAACCTGACTATTGGGGCTCCGGTGATCCAGAGCTTGAGG |
Microexon-tag Amino Acid Seq | AERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR |
Microexon-tag spanning region | 141290195-141292208 |
Microexon-tag prediction score | 0.9648 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d021050_T002x |
Reference Transcript ID | Zm00001d021050_T002 |
Gene ID | Zm00001d021050 |
Gene Name | NA |
Transcript ID | Zm00001d021050_T002 |
Protein ID | Zm00001d021050_P002 |
Gene ID | Zm00001d021050 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.3e-32 |
Motif start | 5 |
Motif end | 97 |
Protein seq | >Zm00001d021050_P002 MAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTKPSDYVEPF GKAGASGFTFHIEVARGEHTSVEWPSIFSSPLMEKLYADNWQDLIQSIKSKGMRPGVSLRPGTPVEEVFPLVEAENPVEL VLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAADPGAIISVLRKSV EGSQNKN* |
CDS seq | >Zm00001d021050_T002 ATGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTTGCCAACCTCGCTTCGGAGGCTGAGCGCATGGTCCG CCTAGGCGCCGACTGGCTACATATGGACATCATGGATGGGCACTTCGTTCCTAACCTGACTATTGGGGCTCCGGTGATCC AGAGCTTGAGGAAACATACCAAAGCATATTTGGACTGCCATCTTATGGTCACAAAGCCTTCAGATTACGTAGAACCATTT GGAAAGGCTGGCGCTTCTGGATTCACATTCCATATAGAAGTTGCTAGAGGTGAACACACATCTGTTGAATGGCCTAGTAT TTTCAGTTCTCCTCTTATGGAAAAACTTTATGCAGACAACTGGCAAGATCTCATCCAAAGCATTAAATCAAAGGGTATGC GGCCTGGTGTATCATTGAGGCCAGGTACTCCAGTGGAGGAAGTTTTTCCCCTGGTGGAAGCAGAAAATCCGGTAGAATTG GTTCTTGTGATGACAGTCGAGCCTGGTTTTGGTGGTCAGAAATTTATGCCAGAAATGATGGATAAGGTGCGCACACTGAG AAAGAAGTACCCTTCCCTTGACATAGAGGTTGATGGTGGTCTAGGTCCTTCAACCATAGACGTGGCCGCATCTGCTGGGG CCAATTGCATCGTCGCTGGAAGCTCTATATTTGGCGCTGCGGACCCAGGAGCCATCATATCTGTGCTGAGGAAGAGCGTC GAGGGCTCTCAGAACAAAAACTGA |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAGCGCATGGTCCGCCTAGGCGCCGACTGGCTACATATGGACATCATGGATGGGCACTTCGTTCCTAACCTGACTATTGGGGCTCCGGTGATCCAGAGCTTGAGG |
Microexon-tag Amino Acid seq | AERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR |
Transcript ID | Zm.31249.1 |
Gene ID | Zm.31249 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.4e-70 |
Motif start | 5 |
Motif end | 202 |
Protein seq | >Zm.31249.1 MAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTKPSDYVEPF GKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDK VRTLRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAADPGAIISVLRKSVEGSQNKN* |
CDS seq | >Zm.31249.1 ATGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTTGCCAACCTCGCTTCGGAGGCTGAGCGCATGGTCCG CCTAGGCGCCGACTGGCTACATATGGACATCATGGATGGGCACTTCGTTCCTAACCTGACTATTGGGGCTCCGGTGATCC AGAGCTTGAGGAAACATACCAAAGCATATTTGGACTGCCATCTTATGGTCACAAAGCCTTCAGATTACGTAGAACCATTT GGAAAGGCTGGCGCTTCTGGATTCACATTCCATATAGAAGTTGCTAGAGACAACTGGCAAGATCTCATCCAAAGCATTAA ATCAAAGGGTATGCGGCCTGGTGTATCATTGAGGCCAGGTACTCCAGTGGAGGAAGTTTTTCCCCTGGTGGAAGCAGAAA ATCCGGTAGAATTGGTTCTTGTGATGACAGTCGAGCCTGGTTTTGGTGGTCAGAAATTTATGCCAGAAATGATGGATAAG GTGCGCACACTGAGAAAGAAGTACCCTTCCCTTGACATAGAGGTTGATGGTGGTCTAGGTCCTTCAACCATAGACGTGGC CGCATCTGCTGGGGCCAATTGCATCGTCGCTGGAAGCTCTATATTTGGCGCTGCGGACCCAGGAGCCATCATATCTGTGC TGAGGAAGAGCGTCGAGGGCTCTCAGAACAAAAACTGA |