Microexon ID Zm_7:141291438-141291442:-
Species Zea mays
Coordinates 7:141291438..141291442
Microexon Cluster ID MEP06
Size 5
Phase 0
Pfam Domain Motif Ribul_P_3_epim
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,5,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCTGAGCGCATGGTCCGCCTAGGCGCCGACTGGCTACATATGGACATCATGGATGGGCACTTCGTTCCTAACCTGACTATTGGGGCTCCGGTGATCCAGAGCTTGAGG
Microexon-tag Amino Acid Seq AERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR
Microexon-tag spanning region141290195-141292208
Microexon-tag prediction score0.9648
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d021050_T002x
Reference Transcript ID Zm00001d021050_T002
Gene ID Zm00001d021050
Gene Name NA
Transcript ID Zm00001d021050_T002
Protein ID Zm00001d021050_P002
Gene ID Zm00001d021050
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 1.3e-32
Motif start 5
Motif end 97
Protein seq >Zm00001d021050_P002
MAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTKPSDYVEPF
GKAGASGFTFHIEVARGEHTSVEWPSIFSSPLMEKLYADNWQDLIQSIKSKGMRPGVSLRPGTPVEEVFPLVEAENPVEL
VLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAADPGAIISVLRKSV
EGSQNKN*
CDS seq >Zm00001d021050_T002
ATGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTTGCCAACCTCGCTTCGGAGGCTGAGCGCATGGTCCG
CCTAGGCGCCGACTGGCTACATATGGACATCATGGATGGGCACTTCGTTCCTAACCTGACTATTGGGGCTCCGGTGATCC
AGAGCTTGAGGAAACATACCAAAGCATATTTGGACTGCCATCTTATGGTCACAAAGCCTTCAGATTACGTAGAACCATTT
GGAAAGGCTGGCGCTTCTGGATTCACATTCCATATAGAAGTTGCTAGAGGTGAACACACATCTGTTGAATGGCCTAGTAT
TTTCAGTTCTCCTCTTATGGAAAAACTTTATGCAGACAACTGGCAAGATCTCATCCAAAGCATTAAATCAAAGGGTATGC
GGCCTGGTGTATCATTGAGGCCAGGTACTCCAGTGGAGGAAGTTTTTCCCCTGGTGGAAGCAGAAAATCCGGTAGAATTG
GTTCTTGTGATGACAGTCGAGCCTGGTTTTGGTGGTCAGAAATTTATGCCAGAAATGATGGATAAGGTGCGCACACTGAG
AAAGAAGTACCCTTCCCTTGACATAGAGGTTGATGGTGGTCTAGGTCCTTCAACCATAGACGTGGCCGCATCTGCTGGGG
CCAATTGCATCGTCGCTGGAAGCTCTATATTTGGCGCTGCGGACCCAGGAGCCATCATATCTGTGCTGAGGAAGAGCGTC
GAGGGCTCTCAGAACAAAAACTGA
Microexon DNA seq GATGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCTGAGCGCATGGTCCGCCTAGGCGCCGACTGGCTACATATGGACATCATGGATGGGCACTTCGTTCCTAACCTGACTATTGGGGCTCCGGTGATCCAGAGCTTGAGG
Microexon-tag Amino Acid seq AERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR
Transcript ID Zm.31249.1
Gene ID Zm.31249
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 1.4e-70
Motif start 5
Motif end 202
Protein seq >Zm.31249.1
MAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTKPSDYVEPF
GKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDK
VRTLRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAADPGAIISVLRKSVEGSQNKN*
CDS seq >Zm.31249.1
ATGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTTGCCAACCTCGCTTCGGAGGCTGAGCGCATGGTCCG
CCTAGGCGCCGACTGGCTACATATGGACATCATGGATGGGCACTTCGTTCCTAACCTGACTATTGGGGCTCCGGTGATCC
AGAGCTTGAGGAAACATACCAAAGCATATTTGGACTGCCATCTTATGGTCACAAAGCCTTCAGATTACGTAGAACCATTT
GGAAAGGCTGGCGCTTCTGGATTCACATTCCATATAGAAGTTGCTAGAGACAACTGGCAAGATCTCATCCAAAGCATTAA
ATCAAAGGGTATGCGGCCTGGTGTATCATTGAGGCCAGGTACTCCAGTGGAGGAAGTTTTTCCCCTGGTGGAAGCAGAAA
ATCCGGTAGAATTGGTTCTTGTGATGACAGTCGAGCCTGGTTTTGGTGGTCAGAAATTTATGCCAGAAATGATGGATAAG
GTGCGCACACTGAGAAAGAAGTACCCTTCCCTTGACATAGAGGTTGATGGTGGTCTAGGTCCTTCAACCATAGACGTGGC
CGCATCTGCTGGGGCCAATTGCATCGTCGCTGGAAGCTCTATATTTGGCGCTGCGGACCCAGGAGCCATCATATCTGTGC
TGAGGAAGAGCGTCGAGGGCTCTCAGAACAAAAACTGA