
Microexon ID | Vv_14:26002962-26002966:+ |
Species | Vistis vinifera | Coordinates | 14:26002962..26002966 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCCCAACGTATGCTCAGTTTTGGCGCCGACTGGCTCCACATGGACATCATGGATGGGCACTTTGTTCCGAACCTTACTATTGGTGCCCCAGTCATTGAGAGTCTGAGA |
Microexon-tag Amino Acid Seq | AQRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLR |
Microexon-tag spanning region | 26002777-26005582 |
Microexon-tag prediction score | 0.98 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_14s0171g00130.t01x |
Reference Transcript ID | VIT_14s0171g00130.t01 |
Gene ID | VIT_14s0171g00130 |
Gene Name | NA |
Transcript ID | VIT_14s0171g00130.t01 |
Protein ID | VIT_14s0171g00130.t01 |
Gene ID | VIT_14s0171g00130 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 2.3e-70 |
Motif start | 5 |
Motif end | 202 |
Protein seq | >VIT_14s0171g00130.t01 MAPAKIAPSMLSSDFANLASEAQRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPLDYVEPL GKAGASGFTFHVEVSKENWQELVERIRSKGMRPGVALKPGTPIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPEMMDK VRALRKKYPSLDIEVDGGLGPSTIDMAASAGANCIVAGSSVFGAPKPEQVISLLRKSVEEAQ* |
CDS seq | >VIT_14s0171g00130.t01 ATGGCGCCGGCGAAGATCGCACCCTCTATGCTCTCCTCCGACTTCGCCAACTTGGCTTCCGAAGCCCAACGTATGCTCAG TTTTGGCGCCGACTGGCTCCACATGGACATCATGGATGGGCACTTTGTTCCGAACCTTACTATTGGTGCCCCAGTCATTG AGAGTCTGAGAAAGCACACAAATGCATATCTGGATTGCCACCTGATGGTCACAAATCCTCTTGATTATGTGGAGCCTCTA GGAAAAGCTGGTGCTTCAGGTTTCACATTTCATGTTGAGGTATCCAAAGAGAATTGGCAAGAGCTTGTTGAAAGAATTAG GTCAAAAGGTATGAGGCCAGGTGTGGCCTTGAAGCCTGGAACACCCATTGAAGAAGTTTATCCATTGGTTGAAGGTGAAA ATCCAGTGGAAATGGTCCTTGTCATGACTGTGGAACCTGGATTTGGTGGACAAAAATTCATGCCAGAAATGATGGATAAG GTACGTGCATTGAGAAAGAAGTACCCTTCACTTGATATTGAGGTAGACGGTGGTTTAGGGCCTTCTACCATTGACATGGC TGCTTCAGCAGGAGCCAATTGCATCGTTGCAGGGAGCTCAGTATTTGGAGCCCCCAAGCCAGAGCAAGTTATATCTCTTC TGAGAAAAAGCGTGGAGGAAGCCCAGTGA |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCCCAACGTATGCTCAGTTTTGGCGCCGACTGGCTCCACATGGACATCATGGATGGGCACTTTGTTCCGAACCTTACTATTGGTGCCCCAGTCATTGAGAGTCTGAGA |
Microexon-tag Amino Acid seq | AQRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLR |
Transcript ID | VIT_14s0171g00130.t01 |
Gene ID | Vv.10079 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 2.3e-70 |
Motif start | 5 |
Motif end | 202 |
Protein seq | >VIT_14s0171g00130.t01 MAPAKIAPSMLSSDFANLASEAQRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPLDYVEPL GKAGASGFTFHVEVSKENWQELVERIRSKGMRPGVALKPGTPIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPEMMDK VRALRKKYPSLDIEVDGGLGPSTIDMAASAGANCIVAGSSVFGAPKPEQVISLLRKSVEEAQ* |
CDS seq | >VIT_14s0171g00130.t01 ATGGCGCCGGCGAAGATCGCACCCTCTATGCTCTCCTCCGACTTCGCCAACTTGGCTTCCGAAGCCCAACGTATGCTCAG TTTTGGCGCCGACTGGCTCCACATGGACATCATGGATGGGCACTTTGTTCCGAACCTTACTATTGGTGCCCCAGTCATTG AGAGTCTGAGAAAGCACACAAATGCATATCTGGATTGCCACCTGATGGTCACAAATCCTCTTGATTATGTGGAGCCTCTA GGAAAAGCTGGTGCTTCAGGTTTCACATTTCATGTTGAGGTATCCAAAGAGAATTGGCAAGAGCTTGTTGAAAGAATTAG GTCAAAAGGTATGAGGCCAGGTGTGGCCTTGAAGCCTGGAACACCCATTGAAGAAGTTTATCCATTGGTTGAAGGTGAAA ATCCAGTGGAAATGGTCCTTGTCATGACTGTGGAACCTGGATTTGGTGGACAAAAATTCATGCCAGAAATGATGGATAAG GTACGTGCATTGAGAAAGAAGTACCCTTCACTTGATATTGAGGTAGACGGTGGTTTAGGGCCTTCTACCATTGACATGGC TGCTTCAGCAGGAGCCAATTGCATCGTTGCAGGGAGCTCAGTATTTGGAGCCCCCAAGCCAGAGCAAGTTATATCTCTTC TGAGAAAAAGCGTGGAGGAAGCCCAGTGA |