Microexon ID Ta_5D:390273630-390273634:-
Species Triticum   Aestivum
Coordinates 5D:390273630..390273634
Microexon Cluster ID MEP06
Size 5
Phase 0
Pfam Domain Motif Ribul_P_3_epim
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,5,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCCGAGCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACGTCATGGATGGGCACTTCGTTCCTAATTTAACTATTGGAGCTCCAGTGATTGAGAGCTTGAGG
Microexon-tag Amino Acid Seq AERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLR
Microexon-tag spanning region390272498-390274404
Microexon-tag prediction score0.9818
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5D02G292800.2x
Reference Transcript ID TraesCS5D02G292800.2
Gene ID TraesCS5D02G292800
Gene Name NA
Transcript ID TraesCS5D02G292800.2
Protein ID
Gene ID TraesCS5D02G292800
Gene Name
Pfam domain motif Ribul_P_3_epim
Motif E-value 3.50E-72
Motif start 6
Motif end 203
Protein seq >TraesCS5D02G292800.2
MAAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPSDYVEA
FGKAGASGFTFHIEVARDNWKELIQNIKAKGMRPGVSLKPGTPVEDVFPLVEAETPVELVLVMTVEPGFGGQKFMPEMMD
KVRTLRKKYQSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPDPGQVISALRKSVEASQIKS*
CDS seq >TraesCS5D02G292800.2
ATGGCGGCGGCGGCGAAGATAGCGCCGTCCATGCTCTCGTCGGACTTCGCCAACCTCGCCTCGGAGGCCGAGCGCATGGT
CCGCCTCGGCGCCGACTGGCTCCACATGGACGTCATGGATGGGCACTTCGTTCCTAATTTAACTATTGGAGCTCCAGTGA
TTGAGAGCTTGAGGAAGCACACCAAGGCATATTTGGACTGCCATCTCATGGTCACAAATCCTTCTGATTATGTAGAGGCA
TTTGGGAAAGCTGGTGCCTCAGGATTCACATTCCATATAGAAGTAGCCAGGGATAACTGGAAAGAGCTCATCCAAAACAT
TAAAGCAAAGGGCATGCGGCCTGGTGTATCATTGAAGCCTGGTACTCCTGTGGAAGATGTTTTTCCCCTGGTGGAAGCAG
AAACCCCTGTAGAGTTGGTTCTGGTGATGACAGTCGAGCCTGGCTTTGGTGGCCAGAAGTTCATGCCGGAGATGATGGAT
AAGGTGCGTACGCTGAGGAAGAAGTACCAGTCCCTCGACATTGAGGTCGACGGCGGCCTGGGTCCTTCCACCATCGACGC
CGCCGCGTCCGCCGGCGCCAACTGCATCGTCGCGGGGAGCTCCGTGTTCGGCGCGCCCGACCCCGGACAGGTCATCTCGG
CGCTGCGGAAGAGCGTGGAGGCGTCGCAGATCAAGAGCTGA
Ta_5D:390273630-390273634:- does not have available information here.