
Microexon ID | Ta_5B:470214590-470214594:- |
Species | Triticum Aestivum | Coordinates | 5B:470214590..470214594 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCCGAGCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACGTCATGGATGGGCACTTTGTTCCTAATTTAACTATTGGAGCTCCAGTGATTGAGAGCTTGAGG |
Microexon-tag Amino Acid Seq | AERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLR |
Microexon-tag spanning region | 470213456-470215364 |
Microexon-tag prediction score | 0.9841 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G284600.1x |
Reference Transcript ID | TraesCS5B02G284600.1 |
Gene ID | TraesCS5B02G284600 |
Gene Name | NA |
Transcript ID | TraesCS5B02G284600.1 |
Protein ID | |
Gene ID | TraesCS5B02G284600 |
Gene Name | |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 6.80E-72 |
Motif start | 10 |
Motif end | 207 |
Protein seq | >TraesCS5B02G284600.1 MAAAAAAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPSD YVEAFGKAGASGFTFHIEVTRDNWKELIQSIKAKGMRPGVSLKPGTPVEDVFPLVEAETPVELVLVMTVEPGFGGQKFMP EMMDKVRTLRKKHPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPDPGEVISALRKSVEASQIKS* |
CDS seq | >TraesCS5B02G284600.1 ATGGCGGCGGCGGCGGCGGCGGCGGCGAAGATAGCGCCGTCCATGCTGTCGTCGGACTTCGCCAACCTCGCCTCGGAGGC CGAGCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACGTCATGGATGGGCACTTTGTTCCTAATTTAACTATTG GAGCTCCAGTGATTGAGAGCTTGAGGAAGCACACAAAGGCATATTTGGACTGCCATCTCATGGTCACAAATCCTTCAGAT TATGTAGAGGCATTTGGAAAAGCTGGTGCCTCAGGATTCACGTTCCATATAGAAGTAACCAGGGATAACTGGAAAGAGCT CATCCAAAGCATTAAAGCAAAGGGCATGCGACCTGGTGTATCATTGAAGCCTGGTACTCCTGTGGAGGATGTTTTTCCCC TGGTGGAAGCAGAAACCCCTGTAGAGTTGGTTCTCGTGATGACGGTCGAGCCTGGCTTCGGTGGCCAGAAGTTCATGCCG GAGATGATGGATAAGGTGCGTACGCTGAGGAAGAAGCACCCGTCGCTCGACATTGAGGTCGACGGCGGCCTGGGTCCTTC CACCATCGACGCCGCCGCGTCGGCCGGCGCCAACTGCATCGTCGCCGGGAGCTCCGTGTTCGGCGCGCCCGACCCCGGAG AGGTCATCTCGGCGCTGCGCAAGAGCGTGGAGGCGTCGCAGATCAAGAGCTGA |
Ta_5B:470214590-470214594:- does not have available information here.