Microexon ID Ta_5A:493473626-493473630:-
Species Triticum   Aestivum
Coordinates 5A:493473626..493473630
Microexon Cluster ID MEP06
Size 5
Phase 0
Pfam Domain Motif Ribul_P_3_epim
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,5,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCCGAGCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACGTCATGGATGGGCACTTCGTTCCTAATTTAACTATTGGAGCTCCAGTGATTGAGAGCTTGAGG
Microexon-tag Amino Acid Seq AERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLR
Microexon-tag spanning region493472504-493474508
Microexon-tag prediction score0.9818
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5A02G285400.1x
Reference Transcript ID TraesCS5A02G285400.1
Gene ID TraesCS5A02G285400
Gene Name NA
Transcript ID TraesCS5A02G285400.1
Protein ID
Gene ID TraesCS5A02G285400
Gene Name
Pfam domain motif Ribul_P_3_epim
Motif E-value 4.30E-71
Motif start 6
Motif end 203
Protein seq >TraesCS5A02G285400.1
MAAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPSDYVEA
FGKAGASGFTFHIEVARDNWKELTQSIKAKGMRPGVSLKPGTPVEDVFPLVEAETPVELVLVMTVEPGFGGQKFMPEMMD
KVRTLRKKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPDPGEVISALRKSVEASQIKS*
CDS seq >TraesCS5A02G285400.1
ATGGCGGCGGCGGCGAAGATAGCGCCGTCCATGCTCTCGTCGGACTTCGCCAACCTCGCCTCGGAGGCCGAGCGCATGGT
CCGCCTCGGCGCCGACTGGCTCCACATGGACGTCATGGATGGGCACTTCGTTCCTAATTTAACTATTGGAGCTCCAGTGA
TTGAGAGCTTGAGGAAGCACACAAAGGCATATTTGGACTGCCATCTCATGGTCACAAATCCTTCCGATTATGTAGAGGCA
TTTGGAAAAGCTGGTGCCTCAGGATTCACATTCCATATAGAAGTAGCGAGGGATAACTGGAAAGAGCTCACCCAAAGCAT
CAAAGCAAAGGGCATGCGGCCTGGTGTATCATTGAAGCCTGGTACTCCTGTGGAGGATGTTTTCCCCCTGGTGGAAGCAG
AAACCCCTGTAGAGTTGGTTCTCGTGATGACGGTCGAGCCTGGCTTTGGTGGCCAGAAGTTCATGCCGGAGATGATGGAT
AAGGTGCGTACGCTGAGGAAGAAGTACCCGTCCCTCGACATTGAGGTCGACGGTGGCCTGGGTCCTTCCACCATCGACGC
CGCCGCGTCGGCCGGCGCCAACTGCATCGTCGCCGGGAGCTCCGTGTTCGGCGCGCCCGACCCCGGAGAGGTCATCTCGG
CGCTGCGCAAGAGCGTGGAGGCGTCGCAGATCAAGAGCTGA
Ta_5A:493473626-493473630:- does not have available information here.