
Microexon ID | Ta_5A:493473626-493473630:- |
Species | Triticum Aestivum | Coordinates | 5A:493473626..493473630 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCCGAGCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACGTCATGGATGGGCACTTCGTTCCTAATTTAACTATTGGAGCTCCAGTGATTGAGAGCTTGAGG |
Microexon-tag Amino Acid Seq | AERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLR |
Microexon-tag spanning region | 493472504-493474508 |
Microexon-tag prediction score | 0.9818 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5A02G285400.1x |
Reference Transcript ID | TraesCS5A02G285400.1 |
Gene ID | TraesCS5A02G285400 |
Gene Name | NA |
Transcript ID | TraesCS5A02G285400.1 |
Protein ID | |
Gene ID | TraesCS5A02G285400 |
Gene Name | |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 4.30E-71 |
Motif start | 6 |
Motif end | 203 |
Protein seq | >TraesCS5A02G285400.1 MAAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPSDYVEA FGKAGASGFTFHIEVARDNWKELTQSIKAKGMRPGVSLKPGTPVEDVFPLVEAETPVELVLVMTVEPGFGGQKFMPEMMD KVRTLRKKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPDPGEVISALRKSVEASQIKS* |
CDS seq | >TraesCS5A02G285400.1 ATGGCGGCGGCGGCGAAGATAGCGCCGTCCATGCTCTCGTCGGACTTCGCCAACCTCGCCTCGGAGGCCGAGCGCATGGT CCGCCTCGGCGCCGACTGGCTCCACATGGACGTCATGGATGGGCACTTCGTTCCTAATTTAACTATTGGAGCTCCAGTGA TTGAGAGCTTGAGGAAGCACACAAAGGCATATTTGGACTGCCATCTCATGGTCACAAATCCTTCCGATTATGTAGAGGCA TTTGGAAAAGCTGGTGCCTCAGGATTCACATTCCATATAGAAGTAGCGAGGGATAACTGGAAAGAGCTCACCCAAAGCAT CAAAGCAAAGGGCATGCGGCCTGGTGTATCATTGAAGCCTGGTACTCCTGTGGAGGATGTTTTCCCCCTGGTGGAAGCAG AAACCCCTGTAGAGTTGGTTCTCGTGATGACGGTCGAGCCTGGCTTTGGTGGCCAGAAGTTCATGCCGGAGATGATGGAT AAGGTGCGTACGCTGAGGAAGAAGTACCCGTCCCTCGACATTGAGGTCGACGGTGGCCTGGGTCCTTCCACCATCGACGC CGCCGCGTCGGCCGGCGCCAACTGCATCGTCGCCGGGAGCTCCGTGTTCGGCGCGCCCGACCCCGGAGAGGTCATCTCGG CGCTGCGCAAGAGCGTGGAGGCGTCGCAGATCAAGAGCTGA |
Ta_5A:493473626-493473630:- does not have available information here.