
Microexon ID | Sb_2:64308267-64308271:- |
Species | Sorghum Bicolor | Coordinates | 2:64308267..64308271 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAGCGCATGGTCCGCCTAGGCGCCGACTGGTTACATATGGACATCATGGATGGGCACTTTGTTCCTAATCTGACTATTGGGGCTCCGGTGATCCAGAGCTTGAGG |
Microexon-tag Amino Acid Seq | AERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR |
Microexon-tag spanning region | 64307025-64309050 |
Microexon-tag prediction score | 0.9638 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EER99152x |
Reference Transcript ID | EER99152 |
Gene ID | SORBI_3002G257300 |
Gene Name | NA |
Transcript ID | EER99152 |
Protein ID | |
Gene ID | SORBI_3002G257300 |
Gene Name | |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.20E-70 |
Motif start | 5 |
Motif end | 202 |
Protein seq | >EER99152 MAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPF GKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDK VRTLRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAADPGAVISVLRKSVEGSQNKN* |
CDS seq | >EER99152 ATGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTCGCCAACCTCGCCTCGGAGGCTGAGCGCATGGTCCG CCTAGGCGCCGACTGGTTACATATGGACATCATGGATGGGCACTTTGTTCCTAATCTGACTATTGGGGCTCCGGTGATCC AGAGCTTGAGGAAACATACCAAAGCATATTTGGACTGCCATCTTATGGTCACAAACCCTTCAGATTACGTAGAACCATTT GGAAAGGCTGGCGCTTCTGGATTCACATTCCATATAGAAGTTGCTAGAGACAACTGGCAAGATCTCATCCAAAGCATTAA ATCAAAGGGTATGCGGCCTGGTGTATCATTGAGGCCAGGTACACCAGTGGAGGAAGTTTTTCCACTGGTGGAAGCAGAAA ATCCGGTAGAATTGGTTCTTGTGATGACAGTCGAGCCTGGTTTTGGTGGTCAGAAATTTATGCCAGAAATGATGGATAAG GTGCGCACATTGAGAAAGAAGTACCCTTCCCTTGACATAGAGGTTGATGGTGGTCTAGGCCCTTCAACCATAGACGTGGC CGCATCTGCTGGGGCCAATTGCATCGTCGCTGGAAGCTCTATATTTGGCGCCGCGGACCCAGGAGCCGTCATATCTGTGC TGAGGAAGAGCGTTGAGGGCTCTCAGAACAAAAACTGA |
Sb_2:64308267-64308271:- does not have available information here.