
Microexon ID | Ps_NC_039362.1:45498069-45498073:- |
Species | Papaver somniferum | Coordinates | NC_039362.1:45498069..45498073 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAAAAAATGATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAATCTTACCATCGGAGCACCGGTAATTGAGGGTTTAAGG |
Microexon-tag Amino Acid Seq | AEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLR |
Microexon-tag spanning region | 45497862-45498450 |
Microexon-tag prediction score | 0.9394 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026530264.1x |
Reference Transcript ID | XM_026530264.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026530264.1 |
Protein ID | XP_026386049.1 |
Gene ID | LOC113281495 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.4e-71 |
Motif start | 3 |
Motif end | 200 |
Protein seq | >XP_026386049.1 MAKIAPSMLSSDFANLASEAEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLRKHTKAYLDCHLMVTNPLDYVEPLGK AGASGFTFHVEASKDNWQEIIEKVKAKGMRAGVALKPGTPIEEVYPLVDAKNPVDMVLVMTVEPGFGGQKFMPEMMDKVR ALRKKYPALDIEVDGGLGPSTIDAAATAGANCIVAGSSVFGAPEPDQVISLLRKSVVESQQIC* |
CDS seq | >XM_026530264.1 ATGGCAAAGATTGCACCATCGATGCTCTCATCTGATTTTGCAAATTTAGCTTCTGAAGCTGAAAAAATGATCAAATTTGG CGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAATCTTACCATCGGAGCACCGGTAATTGAGGGTT TAAGGAAGCACACAAAGGCATATCTCGACTGTCATCTTATGGTCACAAATCCTCTTGATTACGTGGAACCTCTAGGAAAA GCTGGTGCTTCAGGTTTTACTTTTCATGTTGAGGCGTCGAAAGATAATTGGCAAGAAATTATCGAGAAAGTCAAGGCAAA GGGCATGCGTGCTGGGGTTGCACTGAAGCCTGGAACTCCAATCGAAGAAGTTTATCCACTGGTTGACGCTAAAAACCCTG TTGACATGGTACTTGTCATGACAGTTGAACCTGGATTTGGAGGTCAAAAGTTCATGCCAGAGATGATGGATAAGGTTCGT GCATTGAGGAAGAAGTACCCGGCACTTGATATAGAGGTAGATGGTGGCTTGGGGCCATCGACTATTGATGCAGCAGCCAC AGCTGGGGCAAACTGCATAGTGGCAGGAAGTTCTGTGTTTGGAGCACCAGAACCAGACCAAGTTATATCCCTTCTAAGAA AGAGTGTTGTGGAGTCCCAGCAAATCTGTTAG |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAAAAAATGATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAATCTTACCATCGGAGCACCGGTAATTGAGGGTTTAAGG |
Microexon-tag Amino Acid seq | AEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLR |
Transcript ID | XM_026530264.1 |
Gene ID | Ps.28205 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.4e-71 |
Motif start | 3 |
Motif end | 200 |
Protein seq | >XM_026530264.1 MAKIAPSMLSSDFANLASEAEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLRKHTKAYLDCHLMVTNPLDYVEPLGK AGASGFTFHVEASKDNWQEIIEKVKAKGMRAGVALKPGTPIEEVYPLVDAKNPVDMVLVMTVEPGFGGQKFMPEMMDKVR ALRKKYPALDIEVDGGLGPSTIDAAATAGANCIVAGSSVFGAPEPDQVISLLRKSVVESQQIC* |
CDS seq | >XM_026530264.1 ATGGCAAAGATTGCACCATCGATGCTCTCATCTGATTTTGCAAATTTAGCTTCTGAAGCTGAAAAAATGATCAAATTTGG CGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAATCTTACCATCGGAGCACCGGTAATTGAGGGTT TAAGGAAGCACACAAAGGCATATCTCGACTGTCATCTTATGGTCACAAATCCTCTTGATTACGTGGAACCTCTAGGAAAA GCTGGTGCTTCAGGTTTTACTTTTCATGTTGAGGCGTCGAAAGATAATTGGCAAGAAATTATCGAGAAAGTCAAGGCAAA GGGCATGCGTGCTGGGGTTGCACTGAAGCCTGGAACTCCAATCGAAGAAGTTTATCCACTGGTTGACGCTAAAAACCCTG TTGACATGGTACTTGTCATGACAGTTGAACCTGGATTTGGAGGTCAAAAGTTCATGCCAGAGATGATGGATAAGGTTCGT GCATTGAGGAAGAAGTACCCGGCACTTGATATAGAGGTAGATGGTGGCTTGGGGCCATCGACTATTGATGCAGCAGCCAC AGCTGGGGCAAACTGCATAGTGGCAGGAAGTTCTGTGTTTGGAGCACCAGAACCAGACCAAGTTATATCCCTTCTAAGAA AGAGTGTTGTGGAGTCCCAGCAAATCTGTTAG |