
Microexon ID | Ps_NC_039361.1:131955315-131955319:- |
Species | Papaver somniferum | Coordinates | NC_039361.1:131955315..131955319 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAAAAAATGATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAACCTTACCATCGGAGCACCGGTAATTGAGGGTTTAAGG |
Microexon-tag Amino Acid Seq | AEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLR |
Microexon-tag spanning region | 131955108-131955688 |
Microexon-tag prediction score | 0.9386 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026526209.1x |
Reference Transcript ID | XM_026526209.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026526209.1 |
Protein ID | XP_026381994.1 |
Gene ID | LOC113276590 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 3.3e-70 |
Motif start | 7 |
Motif end | 204 |
Protein seq | >XP_026381994.1 MATVMAKIAPSMLSSDFANLASEAEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLRKHTKAYLDCHLMVTNPLDYVE PLGNAGASGFTFHVEASKDNWQEIIEKVKAKGMRAGVALKPGTPIEEVYPLVDAKNPVDMVLVMTVEPGFVGQKFMPAMM DKVRALRKKYPALDIEVDGGLGSSTIDAAATAGANCIVAGSSVFGAPEPDQVISLLRKSAVESQQIC* |
CDS seq | >XM_026526209.1 ATGGCAACAGTCATGGCAAAGATTGCACCATCGATGCTCTCATCTGATTTTGCAAATTTAGCTTCTGAAGCTGAAAAAAT GATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAACCTTACCATCGGAGCACCGG TAATTGAGGGTTTAAGGAAGCACACAAAGGCATATCTCGACTGTCATCTTATGGTCACAAATCCTCTTGATTACGTGGAA CCTCTAGGCAATGCTGGTGCTTCAGGTTTTACTTTTCATGTTGAGGCATCGAAAGATAATTGGCAAGAAATTATCGAGAA AGTCAAGGCAAAGGGCATGCGTGCTGGGGTTGCACTGAAGCCTGGAACTCCAATCGAAGAAGTTTATCCACTGGTTGACG CTAAAAACCCTGTTGACATGGTACTTGTCATGACAGTTGAACCTGGATTTGTTGGTCAAAAGTTCATGCCAGCGATGATG GATAAGGTTCGTGCATTGAGGAAGAAGTACCCGGCACTTGATATAGAGGTAGATGGTGGCTTGGGGTCATCGACTATTGA TGCAGCAGCCACAGCTGGGGCAAACTGTATAGTGGCAGGAAGTTCTGTGTTTGGAGCACCAGAACCAGACCAAGTTATAT CCCTTCTAAGAAAGAGTGCTGTGGAGTCCCAGCAAATCTGTTAG |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAAAAAATGATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAACCTTACCATCGGAGCACCGGTAATTGAGGGTTTAAGG |
Microexon-tag Amino Acid seq | AEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLR |
Transcript ID | XM_026526209.1 |
Gene ID | Ps.26028 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 3.4e-70 |
Motif start | 7 |
Motif end | 204 |
Protein seq | >XM_026526209.1 MATVMAKIAPSMLSSDFANLASEAEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLRKHTKAYLDCHLMVTNPLDYVE PLGNAGASGFTFHVEASKDNWQEIIEKVKAKGMRAGVALKPGTPIEEVYPLVDAKNPVDMVLVMTVEPGFVGQKFMPAMM DKVRALRKKYPALDIEVDGGLGSSTIDAAATAGANCIVAGSSVFGAPEPDQVISLLRKSAVESQQIC* |
CDS seq | >XM_026526209.1 ATGGCAACAGTCATGGCAAAGATTGCACCATCGATGCTCTCATCTGATTTTGCAAATTTAGCTTCTGAAGCTGAAAAAAT GATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAACCTTACCATCGGAGCACCGG TAATTGAGGGTTTAAGGAAGCACACAAAGGCATATCTCGACTGTCATCTTATGGTCACAAATCCTCTTGATTACGTGGAA CCTCTAGGCAATGCTGGTGCTTCAGGTTTTACTTTTCATGTTGAGGCATCGAAAGATAATTGGCAAGAAATTATCGAGAA AGTCAAGGCAAAGGGCATGCGTGCTGGGGTTGCACTGAAGCCTGGAACTCCAATCGAAGAAGTTTATCCACTGGTTGACG CTAAAAACCCTGTTGACATGGTACTTGTCATGACAGTTGAACCTGGATTTGTTGGTCAAAAGTTCATGCCAGCGATGATG GATAAGGTTCGTGCATTGAGGAAGAAGTACCCGGCACTTGATATAGAGGTAGATGGTGGCTTGGGGTCATCGACTATTGA TGCAGCAGCCACAGCTGGGGCAAACTGTATAGTGGCAGGAAGTTCTGTGTTTGGAGCACCAGAACCAGACCAAGTTATAT CCCTTCTAAGAAAGAGTGCTGTGGAGTCCCAGCAAATCTGTTAG |