Microexon ID Ps_NC_039361.1:131955315-131955319:-
Species Papaver somniferum
Coordinates NC_039361.1:131955315..131955319
Microexon Cluster ID MEP06
Size 5
Phase 0
Pfam Domain Motif Ribul_P_3_epim
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,5,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCTGAAAAAATGATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAACCTTACCATCGGAGCACCGGTAATTGAGGGTTTAAGG
Microexon-tag Amino Acid Seq AEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLR
Microexon-tag spanning region131955108-131955688
Microexon-tag prediction score0.9386
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026526209.1x
Reference Transcript ID XM_026526209.1
Gene ID NA
Gene Name NA
Transcript ID XM_026526209.1
Protein ID XP_026381994.1
Gene ID LOC113276590
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 3.3e-70
Motif start 7
Motif end 204
Protein seq >XP_026381994.1
MATVMAKIAPSMLSSDFANLASEAEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLRKHTKAYLDCHLMVTNPLDYVE
PLGNAGASGFTFHVEASKDNWQEIIEKVKAKGMRAGVALKPGTPIEEVYPLVDAKNPVDMVLVMTVEPGFVGQKFMPAMM
DKVRALRKKYPALDIEVDGGLGSSTIDAAATAGANCIVAGSSVFGAPEPDQVISLLRKSAVESQQIC*
CDS seq >XM_026526209.1
ATGGCAACAGTCATGGCAAAGATTGCACCATCGATGCTCTCATCTGATTTTGCAAATTTAGCTTCTGAAGCTGAAAAAAT
GATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAACCTTACCATCGGAGCACCGG
TAATTGAGGGTTTAAGGAAGCACACAAAGGCATATCTCGACTGTCATCTTATGGTCACAAATCCTCTTGATTACGTGGAA
CCTCTAGGCAATGCTGGTGCTTCAGGTTTTACTTTTCATGTTGAGGCATCGAAAGATAATTGGCAAGAAATTATCGAGAA
AGTCAAGGCAAAGGGCATGCGTGCTGGGGTTGCACTGAAGCCTGGAACTCCAATCGAAGAAGTTTATCCACTGGTTGACG
CTAAAAACCCTGTTGACATGGTACTTGTCATGACAGTTGAACCTGGATTTGTTGGTCAAAAGTTCATGCCAGCGATGATG
GATAAGGTTCGTGCATTGAGGAAGAAGTACCCGGCACTTGATATAGAGGTAGATGGTGGCTTGGGGTCATCGACTATTGA
TGCAGCAGCCACAGCTGGGGCAAACTGTATAGTGGCAGGAAGTTCTGTGTTTGGAGCACCAGAACCAGACCAAGTTATAT
CCCTTCTAAGAAAGAGTGCTGTGGAGTCCCAGCAAATCTGTTAG
Microexon DNA seq GATGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCTGAAAAAATGATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAACCTTACCATCGGAGCACCGGTAATTGAGGGTTTAAGG
Microexon-tag Amino Acid seq AEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLR
Transcript ID XM_026526209.1
Gene ID Ps.26028
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 3.4e-70
Motif start 7
Motif end 204
Protein seq >XM_026526209.1
MATVMAKIAPSMLSSDFANLASEAEKMIKFGADWLHMDIMDGHFVPNLTIGAPVIEGLRKHTKAYLDCHLMVTNPLDYVE
PLGNAGASGFTFHVEASKDNWQEIIEKVKAKGMRAGVALKPGTPIEEVYPLVDAKNPVDMVLVMTVEPGFVGQKFMPAMM
DKVRALRKKYPALDIEVDGGLGSSTIDAAATAGANCIVAGSSVFGAPEPDQVISLLRKSAVESQQIC*
CDS seq >XM_026526209.1
ATGGCAACAGTCATGGCAAAGATTGCACCATCGATGCTCTCATCTGATTTTGCAAATTTAGCTTCTGAAGCTGAAAAAAT
GATCAAATTTGGCGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAACCTTACCATCGGAGCACCGG
TAATTGAGGGTTTAAGGAAGCACACAAAGGCATATCTCGACTGTCATCTTATGGTCACAAATCCTCTTGATTACGTGGAA
CCTCTAGGCAATGCTGGTGCTTCAGGTTTTACTTTTCATGTTGAGGCATCGAAAGATAATTGGCAAGAAATTATCGAGAA
AGTCAAGGCAAAGGGCATGCGTGCTGGGGTTGCACTGAAGCCTGGAACTCCAATCGAAGAAGTTTATCCACTGGTTGACG
CTAAAAACCCTGTTGACATGGTACTTGTCATGACAGTTGAACCTGGATTTGTTGGTCAAAAGTTCATGCCAGCGATGATG
GATAAGGTTCGTGCATTGAGGAAGAAGTACCCGGCACTTGATATAGAGGTAGATGGTGGCTTGGGGTCATCGACTATTGA
TGCAGCAGCCACAGCTGGGGCAAACTGTATAGTGGCAGGAAGTTCTGTGTTTGGAGCACCAGAACCAGACCAAGTTATAT
CCCTTCTAAGAAAGAGTGCTGTGGAGTCCCAGCAAATCTGTTAG