Microexon ID Pp_18:9857442-9857446:+
Species Physcomitrium patens
Coordinates 18:9857442..9857446
Microexon Cluster ID MEP06
Size 5
Phase 0
Pfam Domain Motif Ribul_P_3_epim
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,5,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCCAAGTTCATTGAGGAGTGTGGAGCCGACTGGCTTCACATGGATGTTATGGATGGGCACTTTGTTCCCAATTTGACGATTGGCGCTCCGGTCATCAAGTCCTTGAGA
Microexon-tag Amino Acid Seq AKFIEECGADWLHMDVMDGHFVPNLTIGAPVIKSLR
Microexon-tag spanning region9856766-9857699
Microexon-tag prediction score0.9132
Overlapped with the annotated transcript (%) 100
New Transcript ID Pp3c18_13640V3.1x
Reference Transcript ID Pp3c18_13640V3.1
Gene ID Pp3c18_13640
Gene Name NA
Transcript ID Pp3c18_13640V3.1
Protein ID Pp3c18_13640V3.1
Gene ID Pp3c18_13640
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 1.3e-72
Motif start 13
Motif end 210
Protein seq >Pp3c18_13640V3.1
MAQNLEVKVPRAKIAPSMLSSDFSNLASEAKFIEECGADWLHMDVMDGHFVPNLTIGAPVIKSLRKHTKMYMDCHLMVTN
PMDYVDEFVKAGASGFTFHVEVAKDNWQELIHKIKAGGMRAGVALRPGTPVEEVFPLVESQEPVDMVLVMTVEPGFGGQS
FMPETMPKVNALRRKFPLLDIEVDGGLAPATIKQAAEAGANCIVAGSAVFGAKDPAEVIATLRQGVDAAQTSSIFFK*
CDS seq >Pp3c18_13640V3.1
ATGGCTCAGAATCTAGAGGTAAAGGTGCCGAGAGCAAAAATTGCTCCCTCCATGCTCTCCTCCGACTTTTCCAATCTGGC
GTCAGAAGCCAAGTTCATTGAGGAGTGTGGAGCCGACTGGCTTCACATGGATGTTATGGATGGGCACTTTGTTCCCAATT
TGACGATTGGCGCTCCGGTCATCAAGTCCTTGAGAAAGCATACCAAAATGTACATGGACTGTCATTTGATGGTCACCAAC
CCAATGGACTACGTGGATGAATTTGTGAAGGCCGGCGCTTCAGGCTTCACTTTTCATGTTGAAGTTGCAAAAGACAACTG
GCAGGAACTAATCCACAAAATCAAGGCTGGTGGTATGCGCGCGGGAGTTGCTTTGAGGCCTGGAACTCCTGTTGAAGAAG
TTTTTCCTCTGGTTGAGAGTCAAGAACCAGTGGACATGGTGCTTGTCATGACAGTTGAACCTGGCTTTGGGGGCCAGAGC
TTTATGCCTGAGACGATGCCGAAGGTGAATGCTTTGCGACGGAAGTTTCCGCTCCTTGATATTGAGGTGGATGGTGGCTT
GGCTCCAGCTACCATCAAGCAGGCAGCAGAGGCTGGAGCTAATTGTATTGTAGCAGGGAGCGCTGTCTTTGGGGCTAAGG
ATCCTGCTGAAGTAATCGCTACTCTCCGGCAAGGAGTTGACGCAGCTCAAACTTCTTCGATCTTCTTCAAGTGA
Microexon DNA seq GATGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCCAAGTTCATTGAGGAGTGTGGAGCCGACTGGCTTCACATGGATGTTATGGATGGGCACTTTGTTCCCAATTTGACGATTGGCGCTCCGGTCATCAAGTCCTTGAGA
Microexon-tag Amino Acid seq AKFIEECGADWLHMDVMDGHFVPNLTIGAPVIKSLR
Transcript ID Pp3c18_13640V3.2
Gene ID Pp.9641
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 1.3e-72
Motif start 13
Motif end 210
Protein seq >Pp3c18_13640V3.2
MAQNLEVKVPRAKIAPSMLSSDFSNLASEAKFIEECGADWLHMDVMDGHFVPNLTIGAPVIKSLRKHTKMYMDCHLMVTN
PMDYVDEFVKAGASGFTFHVEVAKDNWQELIHKIKAGGMRAGVALRPGTPVEEVFPLVESQEPVDMVLVMTVEPGFGGQS
FMPETMPKVNALRRKFPLLDIEVDGGLAPATIKQAAEAGANCIVAGSAVFGAKDPAEVIATLRQGVDAAQTSSIFFK*
CDS seq >Pp3c18_13640V3.2
ATGGCTCAGAATCTAGAGGTAAAGGTGCCGAGAGCAAAAATTGCTCCCTCCATGCTCTCCTCCGACTTTTCCAATCTGGC
GTCAGAAGCCAAGTTCATTGAGGAGTGTGGAGCCGACTGGCTTCACATGGATGTTATGGATGGGCACTTTGTTCCCAATT
TGACGATTGGCGCTCCGGTCATCAAGTCCTTGAGAAAGCATACCAAAATGTACATGGACTGTCATTTGATGGTCACCAAC
CCAATGGACTACGTGGATGAATTTGTGAAGGCCGGCGCTTCAGGCTTCACTTTTCATGTTGAAGTTGCAAAAGACAACTG
GCAGGAACTAATCCACAAAATCAAGGCTGGTGGTATGCGCGCGGGAGTTGCTTTGAGGCCTGGAACTCCTGTTGAAGAAG
TTTTTCCTCTGGTTGAGAGTCAAGAACCAGTGGACATGGTGCTTGTCATGACAGTTGAACCTGGCTTTGGGGGCCAGAGC
TTTATGCCTGAGACGATGCCGAAGGTGAATGCTTTGCGACGGAAGTTTCCGCTCCTTGATATTGAGGTGGATGGTGGCTT
GGCTCCAGCTACCATCAAGCAGGCAGCAGAGGCTGGAGCTAATTGTATTGTAGCAGGGAGCGCTGTCTTTGGGGCTAAGG
ATCCTGCTGAAGTAATCGCTACTCTCCGGCAAGGAGTTGACGCAGCTCAAACTTCTTCGATCTTCTTCAAGTGA