
Microexon ID | Os_9:19566901-19566905:+ |
Species | Oryza sativa | Coordinates | 9:19566901..19566905 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GACGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCCGACCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTCCAGTGATTCAGAGCTTGAGG |
Microexon-tag Amino Acid Seq | ADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR |
Microexon-tag spanning region | 19566333-19567051 |
Microexon-tag prediction score | 0.9808 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os09t0505700-01x |
Reference Transcript ID | Os09t0505700-01 |
Gene ID | Os09g0505700 |
Gene Name | NA |
Transcript ID | Os09t0505700-01 |
Protein ID | Os09t0505700-01 |
Gene ID | Os09g0505700 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 4.5e-42 |
Motif start | 8 |
Motif end | 128 |
Protein seq | >Os09t0505700-01 MAAAAAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYV EPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLFMPEMMEKVRALRKKYPSLDIEVDGGLG PSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVEGSQNKS* |
CDS seq | >Os09t0505700-01 ATGGCGGCGGCGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTCGCCAACCTCGCCGCGGAGGCCGACCG CATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTC CAGTGATTCAGAGCTTGAGGAAGCACACCAAGGCATATTTGGACTGCCATCTTATGGTGACCAATCCTTCGGATTATGTA GAACCATTAGCAAAAGCTGGTGCCTCAGGTTTCACATTCCATATAGAAGTATCCAGAGACAATTGGCAAGAACTCATCCA AAGTATCAAAGCAAAGGGTATGCGACCGGGTGTATCATTGAGGCCAGGCACTCCTGTGGAGGAAGTTTTTCCCCTGTTTA TGCCAGAAATGATGGAAAAGGTGCGTGCCCTGAGAAAGAAGTACCCATCCCTTGACATCGAGGTTGATGGTGGTCTGGGT CCTTCCACCATTGATGTGGCTGCATCTGCTGGGGCTAACTGCATTGTCGCTGGAAGCTCAATATTTGGAGCAGCTGAACC AGGAGAGGTCATATCGGCACTAAGGAAGAGCGTTGAAGGATCTCAGAACAAAAGCTGA |
Microexon DNA seq | GACGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCCGACCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTCCAGTGATTCAGAGCTTGAGG |
Microexon-tag Amino Acid seq | ADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR |
Transcript ID | Os09t0505700-01 |
Gene ID | Os.38214 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 4.6e-42 |
Motif start | 8 |
Motif end | 128 |
Protein seq | >Os09t0505700-01 MAAAAAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYV EPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLFMPEMMEKVRALRKKYPSLDIEVDGGLG PSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVEGSQNKS* |
CDS seq | >Os09t0505700-01 ATGGCGGCGGCGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTCGCCAACCTCGCCGCGGAGGCCGACCG CATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTC CAGTGATTCAGAGCTTGAGGAAGCACACCAAGGCATATTTGGACTGCCATCTTATGGTGACCAATCCTTCGGATTATGTA GAACCATTAGCAAAAGCTGGTGCCTCAGGTTTCACATTCCATATAGAAGTATCCAGAGACAATTGGCAAGAACTCATCCA AAGTATCAAAGCAAAGGGTATGCGACCGGGTGTATCATTGAGGCCAGGCACTCCTGTGGAGGAAGTTTTTCCCCTGTTTA TGCCAGAAATGATGGAAAAGGTGCGTGCCCTGAGAAAGAAGTACCCATCCCTTGACATCGAGGTTGATGGTGGTCTGGGT CCTTCCACCATTGATGTGGCTGCATCTGCTGGGGCTAACTGCATTGTCGCTGGAAGCTCAATATTTGGAGCAGCTGAACC AGGAGAGGTCATATCGGCACTAAGGAAGAGCGTTGAAGGATCTCAGAACAAAAGCTGA |