Microexon ID Os_9:19566901-19566905:+
Species Oryza sativa
Coordinates 9:19566901..19566905
Microexon Cluster ID MEP06
Size 5
Phase 0
Pfam Domain Motif Ribul_P_3_epim
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,5,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GACGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCCGACCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTCCAGTGATTCAGAGCTTGAGG
Microexon-tag Amino Acid Seq ADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR
Microexon-tag spanning region19566333-19567051
Microexon-tag prediction score0.9808
Overlapped with the annotated transcript (%) 100
New Transcript ID Os09t0505700-01x
Reference Transcript ID Os09t0505700-01
Gene ID Os09g0505700
Gene Name NA
Transcript ID Os09t0505700-01
Protein ID Os09t0505700-01
Gene ID Os09g0505700
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 4.5e-42
Motif start 8
Motif end 128
Protein seq >Os09t0505700-01
MAAAAAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYV
EPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLFMPEMMEKVRALRKKYPSLDIEVDGGLG
PSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVEGSQNKS*
CDS seq >Os09t0505700-01
ATGGCGGCGGCGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTCGCCAACCTCGCCGCGGAGGCCGACCG
CATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTC
CAGTGATTCAGAGCTTGAGGAAGCACACCAAGGCATATTTGGACTGCCATCTTATGGTGACCAATCCTTCGGATTATGTA
GAACCATTAGCAAAAGCTGGTGCCTCAGGTTTCACATTCCATATAGAAGTATCCAGAGACAATTGGCAAGAACTCATCCA
AAGTATCAAAGCAAAGGGTATGCGACCGGGTGTATCATTGAGGCCAGGCACTCCTGTGGAGGAAGTTTTTCCCCTGTTTA
TGCCAGAAATGATGGAAAAGGTGCGTGCCCTGAGAAAGAAGTACCCATCCCTTGACATCGAGGTTGATGGTGGTCTGGGT
CCTTCCACCATTGATGTGGCTGCATCTGCTGGGGCTAACTGCATTGTCGCTGGAAGCTCAATATTTGGAGCAGCTGAACC
AGGAGAGGTCATATCGGCACTAAGGAAGAGCGTTGAAGGATCTCAGAACAAAAGCTGA
Microexon DNA seq GACGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCCGACCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTCCAGTGATTCAGAGCTTGAGG
Microexon-tag Amino Acid seq ADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR
Transcript ID Os09t0505700-01
Gene ID Os.38214
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 4.6e-42
Motif start 8
Motif end 128
Protein seq >Os09t0505700-01
MAAAAAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYV
EPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLFMPEMMEKVRALRKKYPSLDIEVDGGLG
PSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVEGSQNKS*
CDS seq >Os09t0505700-01
ATGGCGGCGGCGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTCGCCAACCTCGCCGCGGAGGCCGACCG
CATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTC
CAGTGATTCAGAGCTTGAGGAAGCACACCAAGGCATATTTGGACTGCCATCTTATGGTGACCAATCCTTCGGATTATGTA
GAACCATTAGCAAAAGCTGGTGCCTCAGGTTTCACATTCCATATAGAAGTATCCAGAGACAATTGGCAAGAACTCATCCA
AAGTATCAAAGCAAAGGGTATGCGACCGGGTGTATCATTGAGGCCAGGCACTCCTGTGGAGGAAGTTTTTCCCCTGTTTA
TGCCAGAAATGATGGAAAAGGTGCGTGCCCTGAGAAAGAAGTACCCATCCCTTGACATCGAGGTTGATGGTGGTCTGGGT
CCTTCCACCATTGATGTGGCTGCATCTGCTGGGGCTAACTGCATTGTCGCTGGAAGCTCAATATTTGGAGCAGCTGAACC
AGGAGAGGTCATATCGGCACTAAGGAAGAGCGTTGAAGGATCTCAGAACAAAAGCTGA