
Microexon ID | Ha_9:133430261-133430265:- |
Species | Helianthus annuus | Coordinates | 9:133430261..133430265 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAGCGCATGCTCACTTTTGGTGCCGATTGGCTTCACATGGACATCATGGATGGTCATTTTGTCCCAAATTTAACAATAGGCGCGCCGGTTATTGAGAGTTTGAGA |
Microexon-tag Amino Acid Seq | AERMLTFGADWLHMDIMDGHFVPNLTIGAPVIESLR |
Microexon-tag spanning region | 133430089-133430577 |
Microexon-tag prediction score | 0.9709 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG15049x |
Reference Transcript ID | OTG15049 |
Gene ID | HannXRQ_Chr09g0256131 |
Gene Name | NA |
Transcript ID | OTG15049 |
Protein ID | OTG15049 |
Gene ID | HannXRQ_Chr09g0256131 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 2e-70 |
Motif start | 51 |
Motif end | 248 |
Protein seq | >OTG15049 MMRVGKMINSRAFGILSISTKSHNYSTSNLNYSTISNHKTSSELGIMVEAKIAPSMLSSDFANLASEAERMLTFGADWLH MDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVDQFGKAGASGFTFHVEVSKDNWPELVKQIKSKGMRPG VALKPGTPIEEVFPLLEGEHPVEMVLVMTVEPGFGGQKFMPDMMNKVRTLREKYPTLDIEVDGGLGPSTIDAAAAAGANC IVAGSSVFGAPEPAQVISLLRTSVNKAQKTC* |
CDS seq | >OTG15049 ATGATGAGAGTAGGTAAGATGATCAATTCTAGGGCATTTGGTATACTATCTATTTCAACCAAAAGTCATAATTATAGCAC ATCAAACCTAAACTATTCAACAATCTCTAATCACAAAACCTCATCGGAGCTCGGAATAATGGTGGAAGCGAAGATCGCAC CGTCGATGCTCTCGTCGGACTTCGCCAATCTCGCATCAGAGGCTGAGCGCATGCTCACTTTTGGTGCCGATTGGCTTCAC ATGGACATCATGGATGGTCATTTTGTCCCAAATTTAACAATAGGCGCGCCGGTTATTGAGAGTTTGAGAAAACATACCAA AGCGTATCTTGATTGCCACCTTATGGTGACAAATCCTCTTGATTATGTCGACCAGTTCGGAAAAGCCGGTGCTTCCGGTT TCACATTTCACGTTGAGGTGTCAAAAGATAACTGGCCCGAACTTGTTAAACAAATCAAGTCCAAGGGAATGCGACCTGGT GTGGCGTTAAAGCCAGGAACACCCATTGAAGAAGTGTTTCCGCTGCTTGAAGGTGAACATCCTGTTGAAATGGTTCTTGT TATGACTGTGGAACCTGGATTTGGCGGGCAGAAGTTCATGCCTGATATGATGAACAAGGTACGCACGCTGAGAGAGAAGT ACCCAACACTTGATATAGAGGTTGATGGAGGTTTAGGGCCTTCTACTATTGATGCAGCAGCAGCTGCTGGTGCAAACTGC ATTGTTGCTGGTAGTTCAGTATTTGGAGCTCCAGAACCAGCTCAAGTTATATCTCTACTGAGAACAAGTGTAAACAAGGC CCAAAAAACTTGTTGA |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAGCGCATGCTCACTTTTGGTGCCGATTGGCTTCACATGGACATCATGGATGGTCATTTTGTCCCAAATTTAACAATAGGCGCGCCGGTTATTGAGAGTTTGAGA |
Microexon-tag Amino Acid seq | AERMLTFGADWLHMDIMDGHFVPNLTIGAPVIESLR |
Transcript ID | OTG15049 |
Gene ID | Ha.56420 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 2e-70 |
Motif start | 51 |
Motif end | 248 |
Protein seq | >OTG15049 MMRVGKMINSRAFGILSISTKSHNYSTSNLNYSTISNHKTSSELGIMVEAKIAPSMLSSDFANLASEAERMLTFGADWLH MDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVDQFGKAGASGFTFHVEVSKDNWPELVKQIKSKGMRPG VALKPGTPIEEVFPLLEGEHPVEMVLVMTVEPGFGGQKFMPDMMNKVRTLREKYPTLDIEVDGGLGPSTIDAAAAAGANC IVAGSSVFGAPEPAQVISLLRTSVNKAQKTC* |
CDS seq | >OTG15049 ATGATGAGAGTAGGTAAGATGATCAATTCTAGGGCATTTGGTATACTATCTATTTCAACCAAAAGTCATAATTATAGCAC ATCAAACCTAAACTATTCAACAATCTCTAATCACAAAACCTCATCGGAGCTCGGAATAATGGTGGAAGCGAAGATCGCAC CGTCGATGCTCTCGTCGGACTTCGCCAATCTCGCATCAGAGGCTGAGCGCATGCTCACTTTTGGTGCCGATTGGCTTCAC ATGGACATCATGGATGGTCATTTTGTCCCAAATTTAACAATAGGCGCGCCGGTTATTGAGAGTTTGAGAAAACATACCAA AGCGTATCTTGATTGCCACCTTATGGTGACAAATCCTCTTGATTATGTCGACCAGTTCGGAAAAGCCGGTGCTTCCGGTT TCACATTTCACGTTGAGGTGTCAAAAGATAACTGGCCCGAACTTGTTAAACAAATCAAGTCCAAGGGAATGCGACCTGGT GTGGCGTTAAAGCCAGGAACACCCATTGAAGAAGTGTTTCCGCTGCTTGAAGGTGAACATCCTGTTGAAATGGTTCTTGT TATGACTGTGGAACCTGGATTTGGCGGGCAGAAGTTCATGCCTGATATGATGAACAAGGTACGCACGCTGAGAGAGAAGT ACCCAACACTTGATATAGAGGTTGATGGAGGTTTAGGGCCTTCTACTATTGATGCAGCAGCAGCTGCTGGTGCAAACTGC ATTGTTGCTGGTAGTTCAGTATTTGGAGCTCCAGAACCAGCTCAAGTTATATCTCTACTGAGAACAAGTGTAAACAAGGC CCAAAAAACTTGTTGA |