
Microexon ID | Ha_10:109750958-109750962:+ |
Species | Helianthus annuus | Coordinates | 10:109750958..109750962 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAGCGAATGGTCAACTTCGGTGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAATCTAACTATTGGTGCTCCAGTTATTGAGAGTTTGAGA |
Microexon-tag Amino Acid Seq | AERMVNFGADWLHMDIMDGHFVPNLTIGAPVIESLR |
Microexon-tag spanning region | 109750798-109751092 |
Microexon-tag prediction score | 0.9827 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG11093x |
Reference Transcript ID | OTG11093 |
Gene ID | HannXRQ_Chr10g0294971 |
Gene Name | NA |
Transcript ID | OTG11093 |
Protein ID | OTG11093 |
Gene ID | HannXRQ_Chr10g0294971 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.4e-69 |
Motif start | 8 |
Motif end | 205 |
Protein seq | >OTG11093 MATQVEPKIAPSMLSSDFANLASEAERMVNFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV DQLGKAGASGFTFHVEVSKDNWQELVKRIKSKGMRPGVALKPGTAVEEVYPLLEGENPVEMVLVMTVEPGFGGQKFMPDM MDKVRTLREKYPTLDIEVDGGLGPSTIDMAAAAGANCIVAGSSVFGAQEPAQVISLLRASVNKARVTG* |
CDS seq | >OTG11093 ATGGCGACACAAGTTGAACCAAAGATCGCACCTTCGATGCTATCATCAGACTTCGCTAATCTTGCATCCGAGGCTGAGCG AATGGTCAACTTCGGTGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAATCTAACTATTGGTGCTC CAGTTATTGAGAGTTTGAGAAAGCACACAAAGGCATATCTGGATTGTCACCTGATGGTAACAAATCCTCTTGATTATGTT GACCAGTTAGGGAAAGCTGGTGCTTCCGGTTTTACATTTCATGTTGAGGTGTCGAAAGATAATTGGCAAGAGCTTGTTAA GCGAATCAAATCGAAGGGTATGCGGCCTGGTGTGGCGTTAAAGCCGGGAACAGCGGTTGAGGAAGTGTATCCCCTGCTTG AAGGGGAAAATCCTGTTGAAATGGTTCTTGTTATGACCGTGGAACCTGGATTTGGTGGGCAGAAATTCATGCCAGATATG ATGGATAAGGTACGCACACTGAGAGAAAAGTATCCGACACTTGATATAGAGGTAGATGGTGGTTTGGGTCCTTCGACAAT CGACATGGCAGCTGCTGCAGGTGCAAACTGCATTGTTGCTGGCAGTTCGGTCTTTGGAGCTCAAGAGCCAGCTCAAGTTA TATCTTTACTCAGAGCAAGTGTTAACAAGGCGCGCGTAACTGGTTGA |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTGAGCGAATGGTCAACTTCGGTGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAATCTAACTATTGGTGCTCCAGTTATTGAGAGTTTGAGA |
Microexon-tag Amino Acid seq | AERMVNFGADWLHMDIMDGHFVPNLTIGAPVIESLR |
Transcript ID | OTG11093 |
Gene ID | Ha.4989 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.4e-69 |
Motif start | 8 |
Motif end | 205 |
Protein seq | >OTG11093 MATQVEPKIAPSMLSSDFANLASEAERMVNFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV DQLGKAGASGFTFHVEVSKDNWQELVKRIKSKGMRPGVALKPGTAVEEVYPLLEGENPVEMVLVMTVEPGFGGQKFMPDM MDKVRTLREKYPTLDIEVDGGLGPSTIDMAAAAGANCIVAGSSVFGAQEPAQVISLLRASVNKARVTG* |
CDS seq | >OTG11093 ATGGCGACACAAGTTGAACCAAAGATCGCACCTTCGATGCTATCATCAGACTTCGCTAATCTTGCATCCGAGGCTGAGCG AATGGTCAACTTCGGTGCTGATTGGCTTCACATGGACATCATGGATGGCCATTTTGTCCCAAATCTAACTATTGGTGCTC CAGTTATTGAGAGTTTGAGAAAGCACACAAAGGCATATCTGGATTGTCACCTGATGGTAACAAATCCTCTTGATTATGTT GACCAGTTAGGGAAAGCTGGTGCTTCCGGTTTTACATTTCATGTTGAGGTGTCGAAAGATAATTGGCAAGAGCTTGTTAA GCGAATCAAATCGAAGGGTATGCGGCCTGGTGTGGCGTTAAAGCCGGGAACAGCGGTTGAGGAAGTGTATCCCCTGCTTG AAGGGGAAAATCCTGTTGAAATGGTTCTTGTTATGACCGTGGAACCTGGATTTGGTGGGCAGAAATTCATGCCAGATATG ATGGATAAGGTACGCACACTGAGAGAAAAGTATCCGACACTTGATATAGAGGTAGATGGTGGTTTGGGTCCTTCGACAAT CGACATGGCAGCTGCTGCAGGTGCAAACTGCATTGTTGCTGGCAGTTCGGTCTTTGGAGCTCAAGAGCCAGCTCAAGTTA TATCTTTACTCAGAGCAAGTGTTAACAAGGCGCGCGTAACTGGTTGA |