
Microexon ID | Gm_19:31444741-31444745:- |
Species | Glycine max | Coordinates | 19:31444741..31444745 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTCAGCGCATGCTCCACTTCGGCGCCGATTGGCTCCACATGGACATCATGGATGGGCATTTTGTCCCCAATTTAACTATTGGCGCTCCAGTTATTGAAAGTTTGAGA |
Microexon-tag Amino Acid Seq | AQRMLHFGADWLHMDIMDGHFVPNLTIGAPVIESLR |
Microexon-tag spanning region | 31443030-31445000 |
Microexon-tag prediction score | 0.9833 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRG94486x |
Reference Transcript ID | KRG94486 |
Gene ID | GLYMA_19G088400 |
Gene Name | NA |
Transcript ID | KRG94486 |
Protein ID | KRG94486 |
Gene ID | GLYMA_19G088400 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.1e-70 |
Motif start | 6 |
Motif end | 203 |
Protein seq | >KRG94486 MGVTPKIAPSMLSSDFANLASEAQRMLHFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKGYLDCHLMVTNPLDYVEP LAKAGASGFTFHVETSKDNWEELIQRIKSHGMTPGVALKPGTPIEEVYPLVEAGNPVEMVLVMTVEPGFGGQKFMPEMMD KVRILRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSVFGAPEPVQVISLLRNSVEKAQQTLIQ* |
CDS seq | >KRG94486 ATGGGAGTGACACCGAAAATTGCTCCTTCGATGCTCTCTTCCGACTTCGCCAATTTGGCTTCCGAGGCTCAGCGCATGCT CCACTTCGGCGCCGATTGGCTCCACATGGACATCATGGATGGGCATTTTGTCCCCAATTTAACTATTGGCGCTCCAGTTA TTGAAAGTTTGAGAAAGCACACAAAGGGATATTTGGATTGTCACCTTATGGTTACAAATCCTCTTGATTATGTTGAGCCC TTGGCAAAAGCTGGTGCTTCTGGTTTTACATTTCATGTAGAGACATCAAAAGATAACTGGGAAGAACTTATCCAAAGAAT CAAGTCACATGGCATGACTCCTGGTGTAGCATTAAAGCCTGGGACCCCCATTGAAGAGGTTTATCCTCTGGTGGAAGCCG GAAATCCTGTGGAAATGGTTCTTGTGATGACTGTAGAACCGGGATTCGGAGGACAAAAATTTATGCCAGAGATGATGGAT AAAGTACGTATACTTAGGAAGAAGTATCCATCACTTGACATAGAGGTTGATGGTGGTTTAGGGCCTTCAACCATAGATGT GGCCGCATCAGCAGGGGCAAACTGCATTGTTGCTGGAAGTTCAGTGTTTGGTGCCCCTGAGCCAGTTCAAGTAATATCCT TACTAAGGAATTCTGTTGAGAAAGCCCAGCAAACCTTGATACAGTAA |
Microexon DNA seq | GATGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTCAGCGCATGCTCCACTTCGGCGCCGATTGGCTCCACATGGACATCATGGATGGGCATTTTGTCCCCAATTTAACTATTGGCGCTCCAGTTATTGAAAGTTTGAGA |
Microexon-tag Amino Acid seq | AQRMLHFGADWLHMDIMDGHFVPNLTIGAPVIESLR |
Transcript ID | KRG94486 |
Gene ID | Gm.27572 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.1e-70 |
Motif start | 6 |
Motif end | 203 |
Protein seq | >KRG94486 MGVTPKIAPSMLSSDFANLASEAQRMLHFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKGYLDCHLMVTNPLDYVEP LAKAGASGFTFHVETSKDNWEELIQRIKSHGMTPGVALKPGTPIEEVYPLVEAGNPVEMVLVMTVEPGFGGQKFMPEMMD KVRILRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSVFGAPEPVQVISLLRNSVEKAQQTLIQ* |
CDS seq | >KRG94486 ATGGGAGTGACACCGAAAATTGCTCCTTCGATGCTCTCTTCCGACTTCGCCAATTTGGCTTCCGAGGCTCAGCGCATGCT CCACTTCGGCGCCGATTGGCTCCACATGGACATCATGGATGGGCATTTTGTCCCCAATTTAACTATTGGCGCTCCAGTTA TTGAAAGTTTGAGAAAGCACACAAAGGGATATTTGGATTGTCACCTTATGGTTACAAATCCTCTTGATTATGTTGAGCCC TTGGCAAAAGCTGGTGCTTCTGGTTTTACATTTCATGTAGAGACATCAAAAGATAACTGGGAAGAACTTATCCAAAGAAT CAAGTCACATGGCATGACTCCTGGTGTAGCATTAAAGCCTGGGACCCCCATTGAAGAGGTTTATCCTCTGGTGGAAGCCG GAAATCCTGTGGAAATGGTTCTTGTGATGACTGTAGAACCGGGATTCGGAGGACAAAAATTTATGCCAGAGATGATGGAT AAAGTACGTATACTTAGGAAGAAGTATCCATCACTTGACATAGAGGTTGATGGTGGTTTAGGGCCTTCAACCATAGATGT GGCCGCATCAGCAGGGGCAAACTGCATTGTTGCTGGAAGTTCAGTGTTTGGTGCCCCTGAGCCAGTTCAAGTAATATCCT TACTAAGGAATTCTGTTGAGAAAGCCCAGCAAACCTTGATACAGTAA |